RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 TMEM17Q86X19 198 aa15.3■□□□□ 0.04
SNX1-208ENST00000559844 VSIG4Q9Y279 399 aa15.3■□□□□ 0.04
SNX1-208ENST00000559844 GOSR2O14653 212 aa15.29■□□□□ 0.04
SNX1-208ENST00000559844 CCL2P13500 99 aa15.29■□□□□ 0.04
SNX1-208ENST00000559844 UXS1Q8NBZ7 420 aa15.29■□□□□ 0.04
SNX1-208ENST00000559844 OR5L1Q8NGL2 311 aa15.29■□□□□ 0.04
SNX1-208ENST00000559844 CCDC120Q96HB5 630 aa15.29■□□□□ 0.04
SNX1-208ENST00000559844 SCGB3A2Q96PL1 93 aa15.29■□□□□ 0.04
SNX1-208ENST00000559844 F5H5P2 479 aa15.29■□□□□ 0.04
SNX1-208ENST00000559844 RGS11O94810 467 aa15.29■□□□□ 0.04
SNX1-208ENST00000559844 CNOT4O95628 575 aaKnown RBP15.29■□□□□ 0.04
SNX1-208ENST00000559844 PLATP00750 562 aa15.29■□□□□ 0.04
SNX1-208ENST00000559844 OR3A3P47888 321 aa15.29■□□□□ 0.04
SNX1-208ENST00000559844 SNU13P55769 128 aaKnown RBP15.29■□□□□ 0.04
SNX1-208ENST00000559844 TAS2R31P59538 309 aa15.29■□□□□ 0.04
SNX1-208ENST00000559844 TFAP2EQ6VUC0 442 aa15.29■□□□□ 0.04
SNX1-208ENST00000559844 OSR2Q8N2R0 312 aa15.29■□□□□ 0.04
SNX1-208ENST00000559844 OR6K3Q8NGY3 331 aa15.29■□□□□ 0.04
SNX1-208ENST00000559844 TERB2Q8NHR7 220 aa15.29■□□□□ 0.04
SNX1-208ENST00000559844 ST6GALNAC5Q9BVH7 336 aa15.29■□□□□ 0.04
SNX1-208ENST00000559844 SFXN3Q9BWM7 321 aa15.29■□□□□ 0.04
SNX1-208ENST00000559844 PAPOLGQ9BWT3 736 aaKnown RBP15.29■□□□□ 0.04
SNX1-208ENST00000559844 G3V3Q6 166 aa15.28■□□□□ 0.04
SNX1-208ENST00000559844 BMP5P22003 454 aa15.28■□□□□ 0.04
SNX1-208ENST00000559844 ADORA2A-AS1P86434 159 aa15.28■□□□□ 0.04
SNX1-208ENST00000559844 PRDX4Q13162 271 aa15.28■□□□□ 0.04
SNX1-208ENST00000559844 NKAPLQ5M9Q1 402 aa15.28■□□□□ 0.04
SNX1-208ENST00000559844 C11orf88Q6PI97 169 aa15.28■□□□□ 0.04
SNX1-208ENST00000559844 ZNF767PQ75MW2 155 aa15.28■□□□□ 0.04
SNX1-208ENST00000559844 ZDHHC23Q8IYP9 409 aa15.28■□□□□ 0.04
SNX1-208ENST00000559844 MRGPRFQ96AM1 343 aa15.28■□□□□ 0.04
SNX1-208ENST00000559844 TMPRSS13Q9BYE2 586 aa15.28■□□□□ 0.04
SNX1-208ENST00000559844 STARD10Q9Y365 291 aa15.28■□□□□ 0.04
SNX1-208ENST00000559844 MYO18BQ8IUG5 2567 aa15.28■□□□□ 0.04
SNX1-208ENST00000559844 OR2AT4A6NND4 320 aa15.27■□□□□ 0.04
SNX1-208ENST00000559844 J3QW42 95 aa15.27■□□□□ 0.04
SNX1-208ENST00000559844 SLC22A5O76082 557 aa15.27■□□□□ 0.04
SNX1-208ENST00000559844 C4BPBP20851 252 aa15.27■□□□□ 0.04
SNX1-208ENST00000559844 OPRM1P35372 400 aa15.27■□□□□ 0.04
SNX1-208ENST00000559844 TSPAN5P62079 268 aa15.27■□□□□ 0.04
SNX1-208ENST00000559844 DHODHQ02127 395 aa15.27■□□□□ 0.04
SNX1-208ENST00000559844 DHRS2Q13268 280 aa15.27■□□□□ 0.04
SNX1-208ENST00000559844 C6orf201Q7Z4U5 140 aa15.27■□□□□ 0.04
SNX1-208ENST00000559844 LYG2Q86SG7 212 aa15.27■□□□□ 0.04
SNX1-208ENST00000559844 MDP1Q86V88 176 aa15.27■□□□□ 0.04
SNX1-208ENST00000559844 OR51F2Q8NH61 342 aa15.27■□□□□ 0.04
SNX1-208ENST00000559844 EMG1Q92979 244 aaKnown RBP15.27■□□□□ 0.04
SNX1-208ENST00000559844 STARD4Q96DR4 205 aa15.27■□□□□ 0.04
SNX1-208ENST00000559844 GPR160Q9UJ42 338 aa15.27■□□□□ 0.04
SNX1-208ENST00000559844 EDARQ9UNE0 448 aa15.27■□□□□ 0.04
SNX1-208ENST00000559844 IGKV1-12A0A0C4DH73 117 aa15.27■□□□□ 0.03
SNX1-208ENST00000559844 PQLC2LA1A4F0 135 aa15.27■□□□□ 0.03
SNX1-208ENST00000559844 IGKV1D-12P01611 117 aa15.27■□□□□ 0.03
SNX1-208ENST00000559844 HLA-AP01891 365 aaKnown RBP15.27■□□□□ 0.03
SNX1-208ENST00000559844 ZBTB25P24278 435 aa15.27■□□□□ 0.03
SNX1-208ENST00000559844 CD34P28906 385 aa15.27■□□□□ 0.03
SNX1-208ENST00000559844 UBE2NP61088 152 aaKnown RBP15.27■□□□□ 0.03
SNX1-208ENST00000559844 TAF9Q16594 264 aa15.27■□□□□ 0.03
SNX1-208ENST00000559844 TBC1D28Q2M2D7 210 aa15.27■□□□□ 0.03
SNX1-208ENST00000559844 CEACAM21Q3KPI0 293 aa15.27■□□□□ 0.03
SNX1-208ENST00000559844 LPCAT3Q6P1A2 487 aa15.27■□□□□ 0.03
SNX1-208ENST00000559844 SAXO1Q8IYX7 474 aa15.27■□□□□ 0.03
SNX1-208ENST00000559844 SLC30A7Q8NEW0 376 aa15.27■□□□□ 0.03
SNX1-208ENST00000559844 COQ3Q9NZJ6 369 aa15.27■□□□□ 0.03
SNX1-208ENST00000559844 ZNF629Q9UEG4 869 aaPredicted RBP15.27■□□□□ 0.03
SNX1-208ENST00000559844 OPN4Q9UHM6 478 aa15.27■□□□□ 0.03
SNX1-208ENST00000559844 PROCRQ9UNN8 238 aa15.27■□□□□ 0.03
SNX1-208ENST00000559844 CEACAM18A8MTB9 384 aa15.26■□□□□ 0.03
SNX1-208ENST00000559844 NGFP01138 241 aa15.26■□□□□ 0.03
SNX1-208ENST00000559844 ZNF35P13682 527 aa15.26■□□□□ 0.03
SNX1-208ENST00000559844 HOXB1P14653 301 aaPredicted RBP15.26■□□□□ 0.03
SNX1-208ENST00000559844 UBE2MP61081 183 aaKnown RBP15.26■□□□□ 0.03
SNX1-208ENST00000559844 CHRFAM7AQ494W8 412 aa15.26■□□□□ 0.03
SNX1-208ENST00000559844 C17orf107Q6ZR85 190 aa15.26■□□□□ 0.03
SNX1-208ENST00000559844 ZNF611Q8N823 705 aa15.26■□□□□ 0.03
SNX1-208ENST00000559844 OR5AP2Q8NGF4 316 aa15.26■□□□□ 0.03
SNX1-208ENST00000559844 HIST1H2AAQ96QV6 131 aa15.26■□□□□ 0.03
SNX1-208ENST00000559844 PPA2Q9H2U2 334 aa15.26■□□□□ 0.03
SNX1-208ENST00000559844 ERRFI1Q9UJM3 462 aaPredicted RBP15.26■□□□□ 0.03
SNX1-208ENST00000559844 PLA2G2AP14555 144 aa15.25■□□□□ 0.03
SNX1-208ENST00000559844 IGHV1-2P23083 117 aa15.25■□□□□ 0.03
SNX1-208ENST00000559844 CHATP28329 748 aa15.25■□□□□ 0.03
SNX1-208ENST00000559844 H2BFSP57053 126 aa15.25■□□□□ 0.03
SNX1-208ENST00000559844 HLXQ14774 488 aaPredicted RBP15.25■□□□□ 0.03
SNX1-208ENST00000559844 LGALSLQ3ZCW2 172 aaPredicted RBP15.25■□□□□ 0.03
SNX1-208ENST00000559844 SIGIRRQ6IA17 410 aa15.25■□□□□ 0.03
SNX1-208ENST00000559844 Q6ZT83 130 aa15.25■□□□□ 0.03
SNX1-208ENST00000559844 ZNF75AQ96N20 296 aa15.25■□□□□ 0.03
SNX1-208ENST00000559844 OPN3Q9H1Y3 402 aaPredicted RBP15.25■□□□□ 0.03
SNX1-208ENST00000559844 ZNF701Q9NV72 531 aaPredicted RBP15.25■□□□□ 0.03
SNX1-208ENST00000559844 NOP16Q9Y3C1 178 aaKnown RBP15.25■□□□□ 0.03
SNX1-208ENST00000559844 ANKRD30BLA7E2S9 258 aa15.25■□□□□ 0.03
SNX1-208ENST00000559844 CD300LBA8K4G0 201 aa15.25■□□□□ 0.03
SNX1-208ENST00000559844 EEF1E1-BLOC1S5C9J1V9 151 aa15.25■□□□□ 0.03
SNX1-208ENST00000559844 TSC22D2O75157 780 aa15.25■□□□□ 0.03
SNX1-208ENST00000559844 CGAP01215 116 aa15.25■□□□□ 0.03
SNX1-208ENST00000559844 DTYMKP23919 212 aa15.25■□□□□ 0.03
SNX1-208ENST00000559844 FPR2P25090 351 aa15.25■□□□□ 0.03
SNX1-208ENST00000559844 WNT5AP41221 380 aa15.25■□□□□ 0.03
SNX1-208ENST00000559844 GRK1Q15835 563 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms