RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 PP6455Q8WZ26 134 aa9.96□□□□□ -0.82
SPG11-219ENST00000559822 CENPNQ96H22 339 aaPredicted RBP9.96□□□□□ -0.82
SPG11-219ENST00000559822 AJUBAQ96IF1 538 aa9.96□□□□□ -0.82
SPG11-219ENST00000559822 GABARAPL3Q9BY60 117 aa9.96□□□□□ -0.82
SPG11-219ENST00000559822 RIBC2Q9H4K1 309 aa9.96□□□□□ -0.82
SPG11-219ENST00000559822 PITPNC1Q9UKF7 332 aa9.96□□□□□ -0.82
SPG11-219ENST00000559822 NOTCH1P46531 2555 aa9.96□□□□□ -0.82
SPG11-219ENST00000559822 VWFP04275 2813 aa9.95□□□□□ -0.82
SPG11-219ENST00000559822 LOC107986453A0A1B0GWG9 222 aa9.95□□□□□ -0.82
SPG11-219ENST00000559822 hADV38S2A0JD32 116 aa9.95□□□□□ -0.82
SPG11-219ENST00000559822 ZNF737O75373 536 aa9.95□□□□□ -0.82
SPG11-219ENST00000559822 CIB2O75838 187 aa9.95□□□□□ -0.82
SPG11-219ENST00000559822 ARG1P05089 322 aa9.95□□□□□ -0.82
SPG11-219ENST00000559822 RBP2P50120 134 aa9.95□□□□□ -0.82
SPG11-219ENST00000559822 EDDM3BP56851 147 aa9.95□□□□□ -0.82
SPG11-219ENST00000559822 ACTC1P68032 377 aa9.95□□□□□ -0.82
SPG11-219ENST00000559822 ACTA1P68133 377 aa9.95□□□□□ -0.82
SPG11-219ENST00000559822 MEF2CQ06413 473 aaPredicted RBP9.95□□□□□ -0.82
SPG11-219ENST00000559822 UBE2V2Q15819 145 aa9.95□□□□□ -0.82
SPG11-219ENST00000559822 CRIP3Q6Q6R5 217 aa9.95□□□□□ -0.82
SPG11-219ENST00000559822 AMIGO2Q86SJ2 522 aa9.95□□□□□ -0.82
SPG11-219ENST00000559822 EGFL6Q8IUX8 553 aa9.95□□□□□ -0.82
SPG11-219ENST00000559822 OR8H2Q8N162 312 aa9.95□□□□□ -0.82
SPG11-219ENST00000559822 DNAAF1Q8NEP3 725 aa9.95□□□□□ -0.82
SPG11-219ENST00000559822 PPP1R35Q8TAP8 253 aa9.95□□□□□ -0.82
SPG11-219ENST00000559822 RPS4Y2Q8TD47 263 aa9.95□□□□□ -0.82
SPG11-219ENST00000559822 TRUB1Q8WWH5 349 aaKnown RBP9.95□□□□□ -0.82
SPG11-219ENST00000559822 EMG1Q92979 244 aaKnown RBP9.95□□□□□ -0.82
SPG11-219ENST00000559822 SLAMF9Q96A28 289 aa9.95□□□□□ -0.82
SPG11-219ENST00000559822 MALSU1Q96EH3 234 aa9.95□□□□□ -0.82
SPG11-219ENST00000559822 SNX22Q96L94 193 aa9.95□□□□□ -0.82
SPG11-219ENST00000559822 ZNF714Q96N38 554 aa9.95□□□□□ -0.82
SPG11-219ENST00000559822 SEBOXQ9HB31 216 aaPredicted RBP9.95□□□□□ -0.82
SPG11-219ENST00000559822 IMPAD1Q9NX62 359 aa9.95□□□□□ -0.82
SPG11-219ENST00000559822 MTCH1Q9NZJ7 389 aa9.95□□□□□ -0.82
SPG11-219ENST00000559822 GLS2Q9UI32 602 aa9.95□□□□□ -0.82
SPG11-219ENST00000559822 ORC6Q9Y5N6 252 aa9.95□□□□□ -0.82
SPG11-219ENST00000559822 FAM90A8PA6NJQ4 464 aa9.94□□□□□ -0.82
SPG11-219ENST00000559822 ODF3BA8MYP8 253 aa9.94□□□□□ -0.82
SPG11-219ENST00000559822 H3BUI4 141 aa9.94□□□□□ -0.82
SPG11-219ENST00000559822 APOL3O95236 402 aa9.94□□□□□ -0.82
SPG11-219ENST00000559822 OCM2P0CE71 109 aa9.94□□□□□ -0.82
SPG11-219ENST00000559822 OCMP0CE72 109 aaPredicted RBP9.94□□□□□ -0.82
SPG11-219ENST00000559822 PEX2P28328 305 aa9.94□□□□□ -0.82
SPG11-219ENST00000559822 ATP1B3P54709 279 aa9.94□□□□□ -0.82
SPG11-219ENST00000559822 DLX6P56179 175 aa9.94□□□□□ -0.82
SPG11-219ENST00000559822 FAM189A2Q15884 450 aa9.94□□□□□ -0.82
SPG11-219ENST00000559822 TMEM244Q5VVB8 128 aa9.94□□□□□ -0.82
SPG11-219ENST00000559822 ZNF626Q68DY1 528 aa9.94□□□□□ -0.82
SPG11-219ENST00000559822 SLC25A26Q70HW3 274 aa9.94□□□□□ -0.82
SPG11-219ENST00000559822 KLHDC1Q8N7A1 406 aa9.94□□□□□ -0.82
SPG11-219ENST00000559822 OR11H6Q8NGC7 330 aa9.94□□□□□ -0.82
SPG11-219ENST00000559822 EME1Q96AY2 570 aa9.94□□□□□ -0.82
SPG11-219ENST00000559822 MRPL48Q96GC5 212 aaKnown RBP9.94□□□□□ -0.82
SPG11-219ENST00000559822 MYCBPQ99417 103 aaPredicted RBP9.94□□□□□ -0.82
SPG11-219ENST00000559822 NKX3-1Q99801 234 aaPredicted RBP9.94□□□□□ -0.82
SPG11-219ENST00000559822 FAM53CQ9NYF3 392 aa9.94□□□□□ -0.82
SPG11-219ENST00000559822 GNG8Q9UK08 70 aa9.94□□□□□ -0.82
SPG11-219ENST00000559822 OAZ3Q9UMX2 235 aa9.94□□□□□ -0.82
SPG11-219ENST00000559822 LINC00312Q9Y6C7 94 aa9.94□□□□□ -0.82
SPG11-219ENST00000559822 IGKV1-27A0A075B6S5 117 aa9.93□□□□□ -0.82
SPG11-219ENST00000559822 A0A0G2JK05 382 aa9.93□□□□□ -0.82
SPG11-219ENST00000559822 SNTNA6NMZ2 147 aa9.93□□□□□ -0.82
SPG11-219ENST00000559822 H3BSH0 61 aa9.93□□□□□ -0.82
SPG11-219ENST00000559822 CHST1O43916 411 aa9.93□□□□□ -0.82
SPG11-219ENST00000559822 HAND1O96004 215 aa9.93□□□□□ -0.82
SPG11-219ENST00000559822 IGHV1-8P0DP01 117 aa9.93□□□□□ -0.82
SPG11-219ENST00000559822 ZNF20P17024 532 aa9.93□□□□□ -0.82
SPG11-219ENST00000559822 PRKACBP22694 351 aa9.93□□□□□ -0.82
SPG11-219ENST00000559822 DYNLT3P51808 116 aa9.93□□□□□ -0.82
SPG11-219ENST00000559822 MTCP1P56278 107 aa9.93□□□□□ -0.82
SPG11-219ENST00000559822 OR12D2P58182 307 aa9.93□□□□□ -0.82
SPG11-219ENST00000559822 DYNC1I2Q13409 638 aaKnown RBP9.93□□□□□ -0.82
SPG11-219ENST00000559822 EDDM3AQ14507 147 aa9.93□□□□□ -0.82
SPG11-219ENST00000559822 GRK1Q15835 563 aa9.93□□□□□ -0.82
SPG11-219ENST00000559822 SPIN3Q5JUX0 258 aa9.93□□□□□ -0.82
SPG11-219ENST00000559822 MINOS1Q5TGZ0 78 aa9.93□□□□□ -0.82
SPG11-219ENST00000559822 ZBTB49Q6ZSB9 765 aa9.93□□□□□ -0.82
SPG11-219ENST00000559822 LHFPL2Q6ZUX7 228 aa9.93□□□□□ -0.82
SPG11-219ENST00000559822 UTS2BQ765I0 119 aa9.93□□□□□ -0.82
SPG11-219ENST00000559822 KCTD20Q7Z5Y7 419 aa9.93□□□□□ -0.82
SPG11-219ENST00000559822 LHFPL4Q7Z7J7 247 aa9.93□□□□□ -0.82
SPG11-219ENST00000559822 PRSS35Q8N3Z0 413 aa9.93□□□□□ -0.82
SPG11-219ENST00000559822 CFHR4Q92496 578 aa9.93□□□□□ -0.82
SPG11-219ENST00000559822 SPSB1Q96BD6 273 aa9.93□□□□□ -0.82
SPG11-219ENST00000559822 NEK6Q9HC98 313 aa9.93□□□□□ -0.82
SPG11-219ENST00000559822 TCF19Q9Y242 345 aa9.93□□□□□ -0.82
SPG11-219ENST00000559822 SIGLEC9Q9Y336 463 aa9.93□□□□□ -0.82
SPG11-219ENST00000559822 PCDHGB5Q9Y5G0 923 aa9.93□□□□□ -0.82
SPG11-219ENST00000559822 MINOS1-NBL1R4GNA1 71 aa9.93□□□□□ -0.82
SPG11-219ENST00000559822 TRBV2A0A0J9YWF9 115 aa9.92□□□□□ -0.82
SPG11-219ENST00000559822 FUOMA2VDF0 154 aa9.92□□□□□ -0.82
SPG11-219ENST00000559822 SAC3D1A6NKF1 404 aa9.92□□□□□ -0.82
SPG11-219ENST00000559822 F8VVB4 439 aa9.92□□□□□ -0.82
SPG11-219ENST00000559822 F8VWA3 439 aa9.92□□□□□ -0.82
SPG11-219ENST00000559822 PEX14O75381 377 aa9.92□□□□□ -0.82
SPG11-219ENST00000559822 INMTO95050 263 aa9.92□□□□□ -0.82
SPG11-219ENST00000559822 OPN1MWP04001 364 aa9.92□□□□□ -0.82
SPG11-219ENST00000559822 ALDOBP05062 364 aa9.92□□□□□ -0.82
SPG11-219ENST00000559822 RPSAP08865 295 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms