RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 CLEC12BQ2HXU8 276 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 FBXL19-AS1Q494R0 122 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 C6orf99Q4VX62 202 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 KCTD16Q68DU8 428 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 IL34Q6ZMJ4 242 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 C6orf120Q7Z4R8 191 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 FAM19A5Q7Z5A7 132 aaPredicted RBP2.44□□□□□ -2.02
SPG11-218ENST00000559754 C10orf67Q8IYJ2 551 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 ZCCHC24Q8N2G6 241 aaKnown RBP2.44□□□□□ -2.02
SPG11-218ENST00000559754 CCNYL1Q8N7R7 359 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 SUMF2Q8NBJ7 301 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 STOML3Q8TAV4 291 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 PIGXQ8TBF5 258 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 OTUB2Q96DC9 234 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 SNF8Q96H20 258 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 SLC35E1Q96K37 410 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 PGLYRP3Q96LB9 341 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 QKIQ96PU8 341 aaKnown RBP eCLIP2.44□□□□□ -2.02
SPG11-218ENST00000559754 TIMM17AQ99595 171 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 HSD17B10Q99714 261 aaKnown RBP2.44□□□□□ -2.02
SPG11-218ENST00000559754 TMEM243Q9BU79 118 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 MRPS26Q9BYN8 205 aaKnown RBP2.44□□□□□ -2.02
SPG11-218ENST00000559754 SLC19A3Q9BZV2 496 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 OR51V1Q9H2C8 321 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 DEC1Q9P2X7 70 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 PRO0628Q9UI54 55 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 DYSFO75923 2080 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 MIA3Q5JRA6 1907 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 IGKV1-27A0A075B6S5 117 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 TRAV19A0A0A6YYK7 116 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 TINCRA0A1B0GVN0 87 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 DAPL1A0PJW8 107 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 RBFOX3A6NFN3 312 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 CEACAM18A8MTB9 384 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 EFCAB9A8MZ26 197 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 I3L4J1 428 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 TGOLN2O43493 480 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 CNMDO75829 334 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 OR5F1O95221 314 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 SOX14O95416 240 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 IFNA6P05013 189 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 ISG15P05161 165 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 BCHEP06276 602 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 UGT2B7P16662 529 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 ATF1P18846 271 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 TAC1P20366 129 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 EVI2BP34910 448 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 RBMXP38159 391 aaKnown RBP2.43□□□□□ -2.02
SPG11-218ENST00000559754 CTRLP40313 264 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 SLC18A1P54219 525 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 C1QTNF8P60827 252 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 HBG1P69891 147 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 HBG2P69892 147 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 CRADDP78560 199 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 REEP5Q00765 189 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 CKAP4Q07065 602 aaKnown RBP2.43□□□□□ -2.02
SPG11-218ENST00000559754 ERCC8Q13216 396 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 RBMY1FQ15415 496 aaKnown RBP2.43□□□□□ -2.02
SPG11-218ENST00000559754 LRRC26Q2I0M4 334 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 DNAL1Q4LDG9 190 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 ATP6AP1LQ52LC2 224 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 CLEC12AQ5QGZ9 265 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 FAM162BQ5T6X4 162 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 ZNF544Q6NX49 715 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 TTC33Q6PID6 262 aaPredicted RBP2.43□□□□□ -2.02
SPG11-218ENST00000559754 OPN5Q6U736 354 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 IGFL2Q6UWQ7 119 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 CLEC19AQ6UXS0 136 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 CASP12Q6UXS9 341 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 HS3ST5Q8IZT8 346 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 ZNF786Q8N393 782 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 DCAKDQ8WVC6 231 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 PTX4Q96A99 478 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 TMEM159Q96B96 161 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 DHRS9Q9BPW9 319 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 FAAP24Q9BTP7 215 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 TAPBPLQ9BX59 468 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 SUCNR1Q9BXA5 334 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 METTL9Q9H1A3 318 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 GUCA1BQ9UMX6 200 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 SLC22A13Q9Y226 551 aa2.43□□□□□ -2.02
SPG11-218ENST00000559754 NRCAMQ92823 1304 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 PIKFYVEQ9Y2I7 2098 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 TSPOAP1O95153 1857 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 IGLV1-50A0A075B6I6 118 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 IGHV6-1A0A0B4J1U7 121 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 IGHV3-66A0A0C4DH42 116 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 A0A1B0GXF2 115 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 TMEM114B3SHH9 223 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 C21orf140B9A014 251 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 LAD1O00515 517 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 CXCR6O00574 342 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 PFDN6O15212 129 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 STX10O60499 249 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 CCDC22O60826 627 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 NSA2O95478 260 aaKnown RBP2.42□□□□□ -2.02
SPG11-218ENST00000559754 INSP01308 110 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 IGLV1-47P01700 117 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 CD74P04233 296 aa2.42□□□□□ -2.02
SPG11-218ENST00000559754 CALB1P05937 261 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms