RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 FN1P02751 2386 aaKnown RBP9.06□□□□□ -0.96
TPM1-217ENST00000559108 NSD1Q96L73 2696 aaPredicted RBP9.05□□□□□ -0.96
TPM1-217ENST00000559108 A0A0G2JK05 382 aa9.05□□□□□ -0.96
TPM1-217ENST00000559108 C22orf46C9J442 243 aa9.05□□□□□ -0.96
TPM1-217ENST00000559108 TRAPPC2LH3BP13 241 aa9.05□□□□□ -0.96
TPM1-217ENST00000559108 CLEC2LP0C7M8 214 aa9.05□□□□□ -0.96
TPM1-217ENST00000559108 RPS2P15880 293 aaKnown RBP9.05□□□□□ -0.96
TPM1-217ENST00000559108 MUC1P15941 1255 aaPredicted RBP9.05□□□□□ -0.96
TPM1-217ENST00000559108 CD36P16671 472 aa9.05□□□□□ -0.96
TPM1-217ENST00000559108 SRMP19623 302 aa9.05□□□□□ -0.96
TPM1-217ENST00000559108 CALRP27797 417 aaKnown RBP9.05□□□□□ -0.96
TPM1-217ENST00000559108 ZNF93P35789 620 aaPredicted RBP9.05□□□□□ -0.96
TPM1-217ENST00000559108 ALDH3B2P48448 385 aa9.05□□□□□ -0.96
TPM1-217ENST00000559108 PPP3R1P63098 170 aa9.05□□□□□ -0.96
TPM1-217ENST00000559108 PLA2G7Q13093 441 aa9.05□□□□□ -0.96
TPM1-217ENST00000559108 PDCD1Q15116 288 aa9.05□□□□□ -0.96
TPM1-217ENST00000559108 FAM166AQ6J272 317 aa9.05□□□□□ -0.96
TPM1-217ENST00000559108 SLC16A12Q6ZSM3 486 aa9.05□□□□□ -0.96
TPM1-217ENST00000559108 PEG10Q86TG7 708 aaKnown RBP9.05□□□□□ -0.96
TPM1-217ENST00000559108 OR13F1Q8NGS4 319 aa9.05□□□□□ -0.96
TPM1-217ENST00000559108 ZNF671Q8TAW3 534 aa9.05□□□□□ -0.96
TPM1-217ENST00000559108 PHYHIPQ92561 330 aa9.05□□□□□ -0.96
TPM1-217ENST00000559108 SLC25A28Q96A46 364 aa9.05□□□□□ -0.96
TPM1-217ENST00000559108 CHCHD6Q9BRQ6 235 aa9.05□□□□□ -0.96
TPM1-217ENST00000559108 POLDIP2Q9Y2S7 368 aa9.05□□□□□ -0.96
TPM1-217ENST00000559108 AK6Q9Y3D8 172 aaKnown RBP9.05□□□□□ -0.96
TPM1-217ENST00000559108 SVEP1Q4LDE5 3571 aa9.05□□□□□ -0.96
TPM1-217ENST00000559108 SONP18583 2426 aaKnown RBP9.04□□□□□ -0.96
TPM1-217ENST00000559108 A0A0B4J203 849 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 TRAV38-1A0A0B4J264 116 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 TMEM82A0PJX8 343 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 RFPL4AA6NLU0 287 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 A8MXK9 166 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 RFPL4AL1F8VTS6 287 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 DVL1O14640 695 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 ADAM20O43506 726 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 ZNF737O75373 536 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 NXPH2O95156 264 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 AVPP01185 164 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 TMEM225BP0DP42 221 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 FOSL1P15407 271 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 PSMA1P25786 263 aaKnown RBP9.04□□□□□ -0.96
TPM1-217ENST00000559108 MAPK3P27361 379 aaPredicted RBP9.04□□□□□ -0.96
TPM1-217ENST00000559108 FGF9P31371 208 aaPredicted RBP9.04□□□□□ -0.96
TPM1-217ENST00000559108 PTGFRP43088 359 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 PITPNBP48739 271 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 CAV3P56539 151 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 LCN2P80188 198 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 TRAM1Q15629 374 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 PIGYQ3MUY2 71 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 ATPAF1Q5TC12 328 aaPredicted RBP9.04□□□□□ -0.96
TPM1-217ENST00000559108 OR10K2Q6IF99 312 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 Q6P435 159 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 C1orf229Q6ZS94 237 aaPredicted RBP9.04□□□□□ -0.96
TPM1-217ENST00000559108 SAXO1Q8IYX7 474 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 FAM58AQ8N1B3 248 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 MUC20Q8N307 709 aaPredicted RBP9.04□□□□□ -0.96
TPM1-217ENST00000559108 SPICQ8N5J4 248 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 JAGN1Q8N5M9 183 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 ZNRF1Q8ND25 227 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 TMEM104Q8NE00 496 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 Q8NFD4 153 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 PXT1Q8NFP0 134 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 EMG1Q92979 244 aaKnown RBP9.04□□□□□ -0.96
TPM1-217ENST00000559108 C12orf43Q96C57 262 aaKnown RBP9.04□□□□□ -0.96
TPM1-217ENST00000559108 NEIL1Q96FI4 390 aaPredicted RBP9.04□□□□□ -0.96
TPM1-217ENST00000559108 FAM192AQ9GZU8 254 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 NEK6Q9HC98 313 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 HMG20AQ9NP66 347 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 KAAG1Q9UBP8 84 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 STUB1Q9UNE7 303 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 WNK2Q9Y3S1 2297 aa9.04□□□□□ -0.96
TPM1-217ENST00000559108 SIGLEC5O15389 551 aa9.03□□□□□ -0.96
TPM1-217ENST00000559108 TMPRSS2O15393 492 aa9.03□□□□□ -0.96
TPM1-217ENST00000559108 CD5LO43866 347 aa9.03□□□□□ -0.96
TPM1-217ENST00000559108 PSPNO60542 156 aa9.03□□□□□ -0.96
TPM1-217ENST00000559108 OCMP0CE72 109 aaPredicted RBP9.03□□□□□ -0.96
TPM1-217ENST00000559108 PRKACAP17612 351 aa9.03□□□□□ -0.96
TPM1-217ENST00000559108 PRDX2P32119 198 aa9.03□□□□□ -0.96
TPM1-217ENST00000559108 CLDN12P56749 244 aa9.03□□□□□ -0.96
TPM1-217ENST00000559108 QRFPP83859 136 aa9.03□□□□□ -0.96
TPM1-217ENST00000559108 IKZF1Q13422 519 aa9.03□□□□□ -0.96
TPM1-217ENST00000559108 MICBQ29980 383 aa9.03□□□□□ -0.96
TPM1-217ENST00000559108 C1orf100Q5SVJ3 147 aa9.03□□□□□ -0.96
TPM1-217ENST00000559108 WDR25Q64LD2 544 aaPredicted RBP9.03□□□□□ -0.96
TPM1-217ENST00000559108 C17orf107Q6ZR85 190 aa9.03□□□□□ -0.96
TPM1-217ENST00000559108 BIVMQ86UB2 503 aa9.03□□□□□ -0.96
TPM1-217ENST00000559108 LURAP1LQ8IV03 231 aa9.03□□□□□ -0.96
TPM1-217ENST00000559108 ZSCAN4Q8NAM6 433 aaPredicted RBP9.03□□□□□ -0.96
TPM1-217ENST00000559108 SDSLQ96GA7 329 aa9.03□□□□□ -0.96
TPM1-217ENST00000559108 GPER1Q99527 375 aa9.03□□□□□ -0.96
TPM1-217ENST00000559108 FUNDC2Q9BWH2 189 aa9.03□□□□□ -0.96
TPM1-217ENST00000559108 MRPS26Q9BYN8 205 aaKnown RBP9.03□□□□□ -0.96
TPM1-217ENST00000559108 TCF7L1Q9HCS4 588 aa9.03□□□□□ -0.96
TPM1-217ENST00000559108 RASL12Q9NYN1 266 aa9.03□□□□□ -0.96
TPM1-217ENST00000559108 CKLFQ9UBR5 152 aa9.03□□□□□ -0.96
TPM1-217ENST00000559108 DNAJB11Q9UBS4 358 aa9.03□□□□□ -0.96
TPM1-217ENST00000559108 OR14J1Q9UGF5 321 aa9.03□□□□□ -0.96
TPM1-217ENST00000559108 MRPS28Q9Y2Q9 187 aaKnown RBP9.03□□□□□ -0.96
TPM1-217ENST00000559108 MTORP42345 2549 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms