RNA–Protein interactions for RNA: ENST00000558795.1

CPNE6-208, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 1,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-208ENST00000558795 MFGE8Q08431 387 aaPredicted RBP12.54□□□□□ -0.4
CPNE6-208ENST00000558795 IKZF1Q13422 519 aa12.54□□□□□ -0.4
CPNE6-208ENST00000558795 ALKBH1Q13686 389 aaKnown RBP12.54□□□□□ -0.4
CPNE6-208ENST00000558795 IRF3Q14653 427 aa12.54□□□□□ -0.4
CPNE6-208ENST00000558795 LRRC10Q5BKY1 277 aa12.54□□□□□ -0.4
CPNE6-208ENST00000558795 RPL22L1Q6P5R6 122 aaKnown RBP12.54□□□□□ -0.4
CPNE6-208ENST00000558795 C1orf122Q6ZSJ8 110 aa12.54□□□□□ -0.4
CPNE6-208ENST00000558795 ELMOD2Q8IZ81 293 aa12.54□□□□□ -0.4
CPNE6-208ENST00000558795 SVOPQ8N4V2 548 aa12.54□□□□□ -0.4
CPNE6-208ENST00000558795 OR2G2Q8NGZ5 317 aa12.54□□□□□ -0.4
CPNE6-208ENST00000558795 OR2T6Q8NHC8 308 aa12.54□□□□□ -0.4
CPNE6-208ENST00000558795 H1FXQ92522 213 aaKnown RBP12.54□□□□□ -0.4
CPNE6-208ENST00000558795 SPSB4Q96A44 273 aa12.54□□□□□ -0.4
CPNE6-208ENST00000558795 SGK3Q96BR1 496 aa12.54□□□□□ -0.4
CPNE6-208ENST00000558795 REEP6Q96HR9 211 aa12.54□□□□□ -0.4
CPNE6-208ENST00000558795 NR1H4Q96RI1 486 aaPredicted RBP12.54□□□□□ -0.4
CPNE6-208ENST00000558795 ZNF319Q9P2F9 582 aa12.54□□□□□ -0.4
CPNE6-208ENST00000558795 FOXJ3Q9UPW0 622 aa12.54□□□□□ -0.4
CPNE6-208ENST00000558795 H3BUX3 64 aa12.53□□□□□ -0.4
CPNE6-208ENST00000558795 EFNB2P52799 333 aa12.53□□□□□ -0.4
CPNE6-208ENST00000558795 DLX1P56177 255 aa12.53□□□□□ -0.4
CPNE6-208ENST00000558795 SPHARQ15513 63 aa12.53□□□□□ -0.4
CPNE6-208ENST00000558795 ZNF773Q6PK81 442 aa12.53□□□□□ -0.4
CPNE6-208ENST00000558795 PNKDQ8N490 385 aa12.53□□□□□ -0.4
CPNE6-208ENST00000558795 KLHDC1Q8N7A1 406 aa12.53□□□□□ -0.4
CPNE6-208ENST00000558795 Q8N7P7 452 aa12.53□□□□□ -0.4
CPNE6-208ENST00000558795 ZNF485Q8NCK3 441 aa12.53□□□□□ -0.4
CPNE6-208ENST00000558795 DCTN5Q9BTE1 182 aa12.53□□□□□ -0.4
CPNE6-208ENST00000558795 FAM234AQ9H0X4 552 aa12.53□□□□□ -0.4
CPNE6-208ENST00000558795 FRRS1LQ9P0K9 344 aa12.53□□□□□ -0.4
CPNE6-208ENST00000558795 TRBV2A0A0J9YWF9 115 aa12.52□□□□□ -0.41
CPNE6-208ENST00000558795 MTRF1O75570 445 aaKnown RBP12.52□□□□□ -0.41
CPNE6-208ENST00000558795 TTRP02766 147 aa12.52□□□□□ -0.41
CPNE6-208ENST00000558795 UBCP0CG48 685 aaKnown RBP12.52□□□□□ -0.41
CPNE6-208ENST00000558795 ATP6V1B1P15313 513 aa12.52□□□□□ -0.41
CPNE6-208ENST00000558795 DDOSTP39656 456 aa12.52□□□□□ -0.41
CPNE6-208ENST00000558795 KIR2DS4P43632 304 aa12.52□□□□□ -0.41
CPNE6-208ENST00000558795 UBE2E1P51965 193 aa12.52□□□□□ -0.41
CPNE6-208ENST00000558795 BDH1Q02338 343 aa12.52□□□□□ -0.41
CPNE6-208ENST00000558795 ACSM1Q08AH1 577 aa12.52□□□□□ -0.41
CPNE6-208ENST00000558795 MED22Q15528 200 aa12.52□□□□□ -0.41
CPNE6-208ENST00000558795 TBCEQ15813 527 aaPredicted RBP12.52□□□□□ -0.41
CPNE6-208ENST00000558795 LY6EQ16553 131 aa12.52□□□□□ -0.41
CPNE6-208ENST00000558795 GFOD2Q3B7J2 385 aa12.52□□□□□ -0.41
CPNE6-208ENST00000558795 TMEM244Q5VVB8 128 aa12.52□□□□□ -0.41
CPNE6-208ENST00000558795 NCR3LG1Q68D85 454 aa12.52□□□□□ -0.41
CPNE6-208ENST00000558795 COMMD2Q86X83 199 aa12.52□□□□□ -0.41
CPNE6-208ENST00000558795 C11orf53Q8IXP5 236 aa12.52□□□□□ -0.41
CPNE6-208ENST00000558795 SPARTQ8N0X7 666 aa12.52□□□□□ -0.41
CPNE6-208ENST00000558795 PRSS35Q8N3Z0 413 aa12.52□□□□□ -0.41
CPNE6-208ENST00000558795 BEND2Q8NDZ0 799 aa12.52□□□□□ -0.41
CPNE6-208ENST00000558795 CCDC54Q8NEL0 328 aa12.52□□□□□ -0.41
CPNE6-208ENST00000558795 OR51E1Q8TCB6 317 aa12.52□□□□□ -0.41
CPNE6-208ENST00000558795 CFHR4Q92496 578 aa12.52□□□□□ -0.41
CPNE6-208ENST00000558795 RNF166Q96A37 237 aaPredicted RBP12.52□□□□□ -0.41
CPNE6-208ENST00000558795 C12orf43Q96C57 262 aaKnown RBP12.52□□□□□ -0.41
CPNE6-208ENST00000558795 SSX3Q99909 188 aa12.52□□□□□ -0.41
CPNE6-208ENST00000558795 COMMD4Q9H0A8 199 aa12.52□□□□□ -0.41
CPNE6-208ENST00000558795 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.52□□□□□ -0.41
CPNE6-208ENST00000558795 NECAP2Q9NVZ3 263 aa12.52□□□□□ -0.41
CPNE6-208ENST00000558795 SLC22A13Q9Y226 551 aa12.52□□□□□ -0.41
CPNE6-208ENST00000558795 NKX6-3A6NJ46 265 aa12.51□□□□□ -0.41
CPNE6-208ENST00000558795 TMEM212A6NML5 194 aa12.51□□□□□ -0.41
CPNE6-208ENST00000558795 E9PI62 339 aa12.51□□□□□ -0.41
CPNE6-208ENST00000558795 OGG1O15527 345 aa12.51□□□□□ -0.41
CPNE6-208ENST00000558795 IGLV3-1P01715 115 aa12.51□□□□□ -0.41
CPNE6-208ENST00000558795 ISG15P05161 165 aa12.51□□□□□ -0.41
CPNE6-208ENST00000558795 VSIG10L2P0DP72 767 aa12.51□□□□□ -0.41
CPNE6-208ENST00000558795 ANOS1P23352 680 aa12.51□□□□□ -0.41
CPNE6-208ENST00000558795 NANOS3P60323 173 aaKnown RBP12.51□□□□□ -0.41
CPNE6-208ENST00000558795 FAM3AP98173 230 aa12.51□□□□□ -0.41
CPNE6-208ENST00000558795 EMX1Q04741 257 aaPredicted RBP12.51□□□□□ -0.41
CPNE6-208ENST00000558795 BLMHQ13867 455 aa12.51□□□□□ -0.41
CPNE6-208ENST00000558795 OXLD1Q5BKU9 147 aa12.51□□□□□ -0.41
CPNE6-208ENST00000558795 WDR82Q6UXN9 313 aa12.51□□□□□ -0.41
CPNE6-208ENST00000558795 ZNF676Q8N7Q3 588 aa12.51□□□□□ -0.41
CPNE6-208ENST00000558795 TSPAN14Q8NG11 270 aa12.51□□□□□ -0.41
CPNE6-208ENST00000558795 OR1M1Q8NGA1 313 aa12.51□□□□□ -0.41
CPNE6-208ENST00000558795 OR4S1Q8NGB4 309 aa12.51□□□□□ -0.41
CPNE6-208ENST00000558795 OR5AK2Q8NH90 309 aa12.51□□□□□ -0.41
CPNE6-208ENST00000558795 C8orf46Q8TAG6 207 aa12.51□□□□□ -0.41
CPNE6-208ENST00000558795 PPP1R35Q8TAP8 253 aa12.51□□□□□ -0.41
CPNE6-208ENST00000558795 TNFRSF14Q92956 283 aa12.51□□□□□ -0.41
CPNE6-208ENST00000558795 SEH1LQ96EE3 360 aa12.51□□□□□ -0.41
CPNE6-208ENST00000558795 RANBP3Q9H6Z4 567 aaPredicted RBP12.51□□□□□ -0.41
CPNE6-208ENST00000558795 METTL8Q9H825 291 aaKnown RBP12.51□□□□□ -0.41
CPNE6-208ENST00000558795 RAB18Q9NP72 206 aa12.51□□□□□ -0.41
CPNE6-208ENST00000558795 ISYNA1Q9NPH2 558 aa12.51□□□□□ -0.41
CPNE6-208ENST00000558795 ACOT13Q9NPJ3 140 aa12.51□□□□□ -0.41
CPNE6-208ENST00000558795 GPR84Q9NQS5 396 aa12.51□□□□□ -0.41
CPNE6-208ENST00000558795 LSM2Q9Y333 95 aaKnown RBP12.51□□□□□ -0.41
CPNE6-208ENST00000558795 MAB21L2Q9Y586 359 aa12.51□□□□□ -0.41
CPNE6-208ENST00000558795 A0A087WXM4 84 aa12.5□□□□□ -0.41
CPNE6-208ENST00000558795 hCG_38984A0A1B0GV85 526 aa12.5□□□□□ -0.41
CPNE6-208ENST00000558795 A0A1W2PQ09 198 aa12.5□□□□□ -0.41
CPNE6-208ENST00000558795 OR4C45A6NMZ5 311 aa12.5□□□□□ -0.41
CPNE6-208ENST00000558795 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.5□□□□□ -0.41
CPNE6-208ENST00000558795 M0R1W7 72 aa12.5□□□□□ -0.41
CPNE6-208ENST00000558795 KIR3DL2P43630 455 aa12.5□□□□□ -0.41
CPNE6-208ENST00000558795 MAP2K4P45985 399 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms