RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 ZSCAN4Q8NAM6 433 aaPredicted RBP7.01□□□□□ -1.29
TPM1-213ENST00000558400 BPIFB6Q8NFQ5 453 aa7.01□□□□□ -1.29
TPM1-213ENST00000558400 PPP1R35Q8TAP8 253 aa7.01□□□□□ -1.29
TPM1-213ENST00000558400 TSEN15Q8WW01 171 aaKnown RBP7.01□□□□□ -1.29
TPM1-213ENST00000558400 GATAD2BQ8WXI9 593 aa7.01□□□□□ -1.29
TPM1-213ENST00000558400 H1FXQ92522 213 aaKnown RBP7.01□□□□□ -1.29
TPM1-213ENST00000558400 THRSPQ92748 146 aa7.01□□□□□ -1.29
TPM1-213ENST00000558400 MYDGFQ969H8 173 aa7.01□□□□□ -1.29
TPM1-213ENST00000558400 GAFA1Q96PS6 74 aa7.01□□□□□ -1.29
TPM1-213ENST00000558400 PDCD1LG2Q9BQ51 273 aa7.01□□□□□ -1.29
TPM1-213ENST00000558400 PCGF1Q9BSM1 259 aa7.01□□□□□ -1.29
TPM1-213ENST00000558400 ZMAT3Q9HA38 289 aaKnown RBP7.01□□□□□ -1.29
TPM1-213ENST00000558400 MTCH1Q9NZJ7 389 aa7.01□□□□□ -1.29
TPM1-213ENST00000558400 ZNF222Q9UK12 451 aa7.01□□□□□ -1.29
TPM1-213ENST00000558400 ZNF281Q9Y2X9 895 aa7.01□□□□□ -1.29
TPM1-213ENST00000558400 MAB21L2Q9Y586 359 aa7.01□□□□□ -1.29
TPM1-213ENST00000558400 IGKV1-27A0A075B6S5 117 aa7□□□□□ -1.29
TPM1-213ENST00000558400 IGKV1-9A0A0C4DH69 117 aa7□□□□□ -1.29
TPM1-213ENST00000558400 M0R1W7 72 aa7□□□□□ -1.29
TPM1-213ENST00000558400 SH2D1BO14796 132 aa7□□□□□ -1.29
TPM1-213ENST00000558400 SULT1B1O43704 296 aa7□□□□□ -1.29
TPM1-213ENST00000558400 ALDOBP05062 364 aa7□□□□□ -1.29
TPM1-213ENST00000558400 CD1AP06126 327 aa7□□□□□ -1.29
TPM1-213ENST00000558400 MMP9P14780 707 aa7□□□□□ -1.29
TPM1-213ENST00000558400 RAB3AP20336 220 aa7□□□□□ -1.29
TPM1-213ENST00000558400 BMXP51813 675 aa7□□□□□ -1.29
TPM1-213ENST00000558400 GTF2A1P52655 376 aaPredicted RBP7□□□□□ -1.29
TPM1-213ENST00000558400 GUCA2AQ02747 115 aa7□□□□□ -1.29
TPM1-213ENST00000558400 CDK5R1Q15078 307 aa7□□□□□ -1.29
TPM1-213ENST00000558400 DGUOKQ16854 277 aa7□□□□□ -1.29
TPM1-213ENST00000558400 TUSC1Q2TAM9 212 aa7□□□□□ -1.29
TPM1-213ENST00000558400 YIF1BQ5BJH7 314 aa7□□□□□ -1.29
TPM1-213ENST00000558400 SPIN3Q5JUX0 258 aa7□□□□□ -1.29
TPM1-213ENST00000558400 OR2G6Q5TZ20 316 aa7□□□□□ -1.29
TPM1-213ENST00000558400 DMKNQ6E0U4 476 aaPredicted RBP7□□□□□ -1.29
TPM1-213ENST00000558400 FAM58AQ8N1B3 248 aa7□□□□□ -1.29
TPM1-213ENST00000558400 CD177Q8N6Q3 437 aa7□□□□□ -1.29
TPM1-213ENST00000558400 ZNRF1Q8ND25 227 aa7□□□□□ -1.29
TPM1-213ENST00000558400 TMEM185AQ8NFB2 350 aa7□□□□□ -1.29
TPM1-213ENST00000558400 OR51A4Q8NGJ6 313 aa7□□□□□ -1.29
TPM1-213ENST00000558400 OR13C9Q8NGT0 318 aa7□□□□□ -1.29
TPM1-213ENST00000558400 OR10AC1Q8NH08 325 aa7□□□□□ -1.29
TPM1-213ENST00000558400 RPS4Y2Q8TD47 263 aa7□□□□□ -1.29
TPM1-213ENST00000558400 FAM216AQ8WUB2 273 aa7□□□□□ -1.29
TPM1-213ENST00000558400 GHSRQ92847 366 aa7□□□□□ -1.29
TPM1-213ENST00000558400 SMIM19Q96E16 107 aa7□□□□□ -1.29
TPM1-213ENST00000558400 SIRPDQ9H106 197 aa7□□□□□ -1.29
TPM1-213ENST00000558400 METTL8Q9H825 291 aaKnown RBP7□□□□□ -1.29
TPM1-213ENST00000558400 UNKLQ9H9P5 680 aaKnown RBP7□□□□□ -1.29
TPM1-213ENST00000558400 NOX4Q9NPH5 578 aa7□□□□□ -1.29
TPM1-213ENST00000558400 PCDHB16Q9NRJ7 776 aa7□□□□□ -1.29
TPM1-213ENST00000558400 ZNF69Q9UC07 566 aa7□□□□□ -1.29
TPM1-213ENST00000558400 CLEC2DQ9UHP7 191 aa7□□□□□ -1.29
TPM1-213ENST00000558400 TPRKBQ9Y3C4 175 aa7□□□□□ -1.29
TPM1-213ENST00000558400 TRAV40A0A0B4J280 105 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 CENPVL3A0A0U1RRI6 287 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 A0A1W2PQ09 198 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 FUOMA2VDF0 154 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 PTGES3LE9PB15 166 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 CLDN34H7C241 214 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 K7N7A8 449 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 MYL12BO14950 172 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 XPNPEP2O43895 674 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 FCN3O75636 299 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 VENTXO95231 258 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 TK1P04183 234 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 HCKP08631 526 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 IGHV4-38-2P0DP08 117 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 PRTN3P24158 256 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 EEF1B2P24534 225 aaKnown RBP6.99□□□□□ -1.29
TPM1-213ENST00000558400 C21orf33P30042 268 aaPredicted RBP6.99□□□□□ -1.29
TPM1-213ENST00000558400 POU3F4P49335 361 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 WNT4P56705 351 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 RPL31P62899 125 aaKnown RBP6.99□□□□□ -1.29
TPM1-213ENST00000558400 PPP3R1P63098 170 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 BDH1Q02338 343 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 ZNF146Q15072 292 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 KISS1Q15726 138 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 KRTAP24-1Q3LI83 254 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 NCR3LG1Q68D85 454 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 AHSA2Q719I0 299 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 NANOGP1Q8N7R0 232 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 ZNF485Q8NCK3 441 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 NRG4Q8WWG1 115 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 C22orf15Q8WYQ4 148 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 EMG1Q92979 244 aaKnown RBP6.99□□□□□ -1.29
TPM1-213ENST00000558400 TMEM106AQ96A25 262 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 SLAMF9Q96A28 289 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 SNX22Q96L94 193 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 ZNF488Q96MN9 340 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 TBX15Q96SF7 602 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 SLC6A7Q99884 636 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 CDCA4Q9BXL8 241 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 PRDM13Q9H4Q3 707 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 HEXA-AS1Q9H8Q6 139 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 TMEM138Q9NPI0 162 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 FKBP14Q9NWM8 211 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 PAK1IP1Q9NWT1 392 aaPredicted RBP6.99□□□□□ -1.29
TPM1-213ENST00000558400 ONECUT1Q9UBC0 465 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 CKLFQ9UBR5 152 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms