RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 SH2D1BO14796 132 aa10.48□□□□□ -0.73
TPM1-209ENST00000558072 ANGPTL7O43827 346 aa10.48□□□□□ -0.73
TPM1-209ENST00000558072 PAHP00439 452 aa10.48□□□□□ -0.73
TPM1-209ENST00000558072 F12P00748 615 aaPredicted RBP10.48□□□□□ -0.73
TPM1-209ENST00000558072 KNG1P01042 644 aa10.48□□□□□ -0.73
TPM1-209ENST00000558072 CSF3P09919 207 aa10.48□□□□□ -0.73
TPM1-209ENST00000558072 PITPNBP48739 271 aa10.48□□□□□ -0.73
TPM1-209ENST00000558072 EFNA4P52798 201 aa10.48□□□□□ -0.73
TPM1-209ENST00000558072 CLDN12P56749 244 aa10.48□□□□□ -0.73
TPM1-209ENST00000558072 ERVK11-1P61568 191 aa10.48□□□□□ -0.73
TPM1-209ENST00000558072 MRPS10P82664 201 aaKnown RBP10.48□□□□□ -0.73
TPM1-209ENST00000558072 QRFPP83859 136 aa10.48□□□□□ -0.73
TPM1-209ENST00000558072 MICBQ29980 383 aa10.48□□□□□ -0.73
TPM1-209ENST00000558072 DMRTC1Q5HYR2 192 aa10.48□□□□□ -0.73
TPM1-209ENST00000558072 PRAMEF6Q5VXH4 476 aa10.48□□□□□ -0.73
TPM1-209ENST00000558072 WDR86Q86TI4 376 aa10.48□□□□□ -0.73
TPM1-209ENST00000558072 CHST4Q8NCG5 386 aa10.48□□□□□ -0.73
TPM1-209ENST00000558072 PPP1R35Q8TAP8 253 aa10.48□□□□□ -0.73
TPM1-209ENST00000558072 LRRC29Q8WV35 223 aa10.48□□□□□ -0.73
TPM1-209ENST00000558072 NEDD4LQ96PU5 975 aa10.48□□□□□ -0.73
TPM1-209ENST00000558072 SELENOIQ9C0D9 397 aa10.48□□□□□ -0.73
TPM1-209ENST00000558072 WDR12Q9GZL7 423 aaKnown RBP10.48□□□□□ -0.73
TPM1-209ENST00000558072 FGF23Q9GZV9 251 aaPredicted RBP10.48□□□□□ -0.73
TPM1-209ENST00000558072 UFSP2Q9NUQ7 469 aa10.48□□□□□ -0.73
TPM1-209ENST00000558072 MTCH1Q9NZJ7 389 aa10.48□□□□□ -0.73
TPM1-209ENST00000558072 DNAJB11Q9UBS4 358 aa10.48□□□□□ -0.73
TPM1-209ENST00000558072 ST3GAL6Q9Y274 331 aa10.48□□□□□ -0.73
TPM1-209ENST00000558072 FABP12A6NFH5 140 aa10.47□□□□□ -0.73
TPM1-209ENST00000558072 OVOL3O00110 214 aa10.47□□□□□ -0.73
TPM1-209ENST00000558072 CTDSP2O14595 271 aa10.47□□□□□ -0.73
TPM1-209ENST00000558072 XRCC3O43542 346 aa10.47□□□□□ -0.73
TPM1-209ENST00000558072 SYNGR1O43759 233 aa10.47□□□□□ -0.73
TPM1-209ENST00000558072 HPGDSO60760 199 aa10.47□□□□□ -0.73
TPM1-209ENST00000558072 PRKACAP17612 351 aa10.47□□□□□ -0.73
TPM1-209ENST00000558072 PMELP40967 661 aa10.47□□□□□ -0.73
TPM1-209ENST00000558072 ETV6P41212 452 aa10.47□□□□□ -0.73
TPM1-209ENST00000558072 MNDAP41218 407 aa10.47□□□□□ -0.73
TPM1-209ENST00000558072 KCNJ3P48549 501 aa10.47□□□□□ -0.73
TPM1-209ENST00000558072 RBM11P57052 281 aaKnown RBP10.47□□□□□ -0.73
TPM1-209ENST00000558072 TMEM33P57088 247 aa10.47□□□□□ -0.73
TPM1-209ENST00000558072 RBM39Q14498 530 aaKnown RBP10.47□□□□□ -0.73
TPM1-209ENST00000558072 ZNF146Q15072 292 aa10.47□□□□□ -0.73
TPM1-209ENST00000558072 MPPED2Q15777 294 aa10.47□□□□□ -0.73
TPM1-209ENST00000558072 CRIP3Q6Q6R5 217 aa10.47□□□□□ -0.73
TPM1-209ENST00000558072 C11orf53Q8IXP5 236 aa10.47□□□□□ -0.73
TPM1-209ENST00000558072 FAM89BQ8N5H3 189 aa10.47□□□□□ -0.73
TPM1-209ENST00000558072 RAB1CQ92928 201 aa10.47□□□□□ -0.73
TPM1-209ENST00000558072 C1orf147Q96MC9 270 aaPredicted RBP10.47□□□□□ -0.73
TPM1-209ENST00000558072 GAL3ST1Q99999 423 aa10.47□□□□□ -0.73
TPM1-209ENST00000558072 DNTTIP1Q9H147 329 aa10.47□□□□□ -0.73
TPM1-209ENST00000558072 IFT22Q9H7X7 185 aa10.47□□□□□ -0.73
TPM1-209ENST00000558072 HES4Q9HCC6 221 aa10.47□□□□□ -0.73
TPM1-209ENST00000558072 TMEM106BQ9NUM4 274 aa10.47□□□□□ -0.73
TPM1-209ENST00000558072 USP9YO00507 2555 aaPredicted RBP10.46□□□□□ -0.73
TPM1-209ENST00000558072 FBN2P35556 2912 aa10.46□□□□□ -0.73
TPM1-209ENST00000558072 PPIAL4EA0A075B759 164 aa10.46□□□□□ -0.73
TPM1-209ENST00000558072 IGKV1-12A0A0C4DH73 117 aa10.46□□□□□ -0.73
TPM1-209ENST00000558072 POM121CA8CG34 1229 aa10.46□□□□□ -0.73
TPM1-209ENST00000558072 CLDN25C9JDP6 229 aa10.46□□□□□ -0.73
TPM1-209ENST00000558072 PPIAL4DF5H284 164 aa10.46□□□□□ -0.73
TPM1-209ENST00000558072 H7C1Q1 480 aa10.46□□□□□ -0.73
TPM1-209ENST00000558072 LHBP01229 141 aa10.46□□□□□ -0.73
TPM1-209ENST00000558072 IGKV1D-12P01611 117 aa10.46□□□□□ -0.73
TPM1-209ENST00000558072 SFTPBP07988 381 aa10.46□□□□□ -0.73
TPM1-209ENST00000558072 PPIAL4FP0DN26 164 aa10.46□□□□□ -0.73
TPM1-209ENST00000558072 DAOP14920 347 aa10.46□□□□□ -0.73
TPM1-209ENST00000558072 PAX1P15863 534 aa10.46□□□□□ -0.73
TPM1-209ENST00000558072 BCL3P20749 454 aa10.46□□□□□ -0.73
TPM1-209ENST00000558072 TNFSF8P32971 234 aa10.46□□□□□ -0.73
TPM1-209ENST00000558072 DSCR9P59020 149 aa10.46□□□□□ -0.73
TPM1-209ENST00000558072 MRPS15P82914 257 aaKnown RBP10.46□□□□□ -0.73
TPM1-209ENST00000558072 ZNF846Q147U1 533 aa10.46□□□□□ -0.73
TPM1-209ENST00000558072 TMEM69Q5SWH9 247 aa10.46□□□□□ -0.73
TPM1-209ENST00000558072 PYHIN1Q6K0P9 492 aa10.46□□□□□ -0.73
TPM1-209ENST00000558072 ACP7Q6ZNF0 438 aa10.46□□□□□ -0.73
TPM1-209ENST00000558072 C1QL2Q7Z5L3 287 aa10.46□□□□□ -0.73
TPM1-209ENST00000558072 ZCCHC24Q8N2G6 241 aaKnown RBP10.46□□□□□ -0.73
TPM1-209ENST00000558072 MUC20Q8N307 709 aaPredicted RBP10.46□□□□□ -0.73
TPM1-209ENST00000558072 OR5H6Q8NGV6 325 aa10.46□□□□□ -0.73
TPM1-209ENST00000558072 OR10R2Q8NGX6 335 aa10.46□□□□□ -0.73
TPM1-209ENST00000558072 CCL17Q92583 94 aa10.46□□□□□ -0.73
TPM1-209ENST00000558072 Q96M66 194 aa10.46□□□□□ -0.73
TPM1-209ENST00000558072 CHODLQ9H9P2 273 aa10.46□□□□□ -0.73
TPM1-209ENST00000558072 EXTL2Q9UBQ6 330 aa10.46□□□□□ -0.73
TPM1-209ENST00000558072 HSF4Q9ULV5 492 aa10.46□□□□□ -0.73
TPM1-209ENST00000558072 PPIAL4AQ9Y536 164 aa10.46□□□□□ -0.73
TPM1-209ENST00000558072 FASNP49327 2511 aaKnown RBP10.45□□□□□ -0.74
TPM1-209ENST00000558072 ARFGEF3Q5TH69 2177 aa10.45□□□□□ -0.74
TPM1-209ENST00000558072 IGHV3-64DA0A0J9YX35 117 aa10.45□□□□□ -0.74
TPM1-209ENST00000558072 FUOMA2VDF0 154 aa10.45□□□□□ -0.74
TPM1-209ENST00000558072 OOEPA6NGQ2 149 aa10.45□□□□□ -0.74
TPM1-209ENST00000558072 NKX6-3A6NJ46 265 aa10.45□□□□□ -0.74
TPM1-209ENST00000558072 SERPINE3A8MV23 424 aa10.45□□□□□ -0.74
TPM1-209ENST00000558072 TMEM178BH3BS89 294 aa10.45□□□□□ -0.74
TPM1-209ENST00000558072 LGALS8O00214 317 aa10.45□□□□□ -0.74
TPM1-209ENST00000558072 DEGS1O15121 323 aa10.45□□□□□ -0.74
TPM1-209ENST00000558072 CA11O75493 328 aa10.45□□□□□ -0.74
TPM1-209ENST00000558072 RHBDL1O75783 438 aa10.45□□□□□ -0.74
TPM1-209ENST00000558072 OR7C1O76099 320 aaPredicted RBP10.45□□□□□ -0.74
TPM1-209ENST00000558072 GSTP1P09211 210 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms