RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 hADV38S2A0JD32 116 aa11.03□□□□□ -0.64
SNRPA1-204ENST00000558020 MITFO75030 526 aaPredicted RBP11.03□□□□□ -0.64
SNRPA1-204ENST00000558020 HTR1FP30939 366 aa11.03□□□□□ -0.64
SNRPA1-204ENST00000558020 BMXP51813 675 aa11.03□□□□□ -0.64
SNRPA1-204ENST00000558020 DYNC1I2Q13409 638 aaKnown RBP11.03□□□□□ -0.64
SNRPA1-204ENST00000558020 ZNF273Q14593 569 aa11.03□□□□□ -0.64
SNRPA1-204ENST00000558020 FAM189A2Q15884 450 aa11.03□□□□□ -0.64
SNRPA1-204ENST00000558020 ODF4Q2M2E3 257 aa11.03□□□□□ -0.64
SNRPA1-204ENST00000558020 CRIP3Q6Q6R5 217 aa11.03□□□□□ -0.64
SNRPA1-204ENST00000558020 ZNF782Q6ZMW2 699 aaPredicted RBP11.03□□□□□ -0.64
SNRPA1-204ENST00000558020 ZBTB49Q6ZSB9 765 aa11.03□□□□□ -0.64
SNRPA1-204ENST00000558020 FAM220AQ7Z4H9 259 aa11.03□□□□□ -0.64
SNRPA1-204ENST00000558020 CATSPERDQ86XM0 798 aa11.03□□□□□ -0.64
SNRPA1-204ENST00000558020 OR8H2Q8N162 312 aa11.03□□□□□ -0.64
SNRPA1-204ENST00000558020 OR10H4Q8NGA5 316 aa11.03□□□□□ -0.64
SNRPA1-204ENST00000558020 OR11H6Q8NGC7 330 aa11.03□□□□□ -0.64
SNRPA1-204ENST00000558020 OR8J1Q8NGP2 316 aa11.03□□□□□ -0.64
SNRPA1-204ENST00000558020 PP6455Q8WZ26 134 aa11.03□□□□□ -0.64
SNRPA1-204ENST00000558020 BORCS8Q96FH0 119 aa11.03□□□□□ -0.64
SNRPA1-204ENST00000558020 SNX22Q96L94 193 aa11.03□□□□□ -0.64
SNRPA1-204ENST00000558020 TBX5Q99593 518 aa11.03□□□□□ -0.64
SNRPA1-204ENST00000558020 PRSS22Q9GZN4 317 aa11.03□□□□□ -0.64
SNRPA1-204ENST00000558020 SEBOXQ9HB31 216 aaPredicted RBP11.03□□□□□ -0.64
SNRPA1-204ENST00000558020 M0R129 80 aa11.02□□□□□ -0.65
SNRPA1-204ENST00000558020 ATP5HO75947 161 aa11.02□□□□□ -0.65
SNRPA1-204ENST00000558020 UBCP0CG48 685 aaKnown RBP11.02□□□□□ -0.65
SNRPA1-204ENST00000558020 PEX2P28328 305 aa11.02□□□□□ -0.65
SNRPA1-204ENST00000558020 EPHA2P29317 976 aa11.02□□□□□ -0.65
SNRPA1-204ENST00000558020 RBP2P50120 134 aa11.02□□□□□ -0.65
SNRPA1-204ENST00000558020 ATP1B3P54709 279 aa11.02□□□□□ -0.65
SNRPA1-204ENST00000558020 CNN3Q15417 329 aaKnown RBP11.02□□□□□ -0.65
SNRPA1-204ENST00000558020 UBE2V2Q15819 145 aa11.02□□□□□ -0.65
SNRPA1-204ENST00000558020 SSX2Q16385 188 aa11.02□□□□□ -0.65
SNRPA1-204ENST00000558020 ARSJQ5FYB0 599 aaPredicted RBP11.02□□□□□ -0.65
SNRPA1-204ENST00000558020 SLC25A26Q70HW3 274 aa11.02□□□□□ -0.65
SNRPA1-204ENST00000558020 KCTD20Q7Z5Y7 419 aa11.02□□□□□ -0.65
SNRPA1-204ENST00000558020 C1QL4Q86Z23 238 aa11.02□□□□□ -0.65
SNRPA1-204ENST00000558020 BATF2Q8N1L9 274 aa11.02□□□□□ -0.65
SNRPA1-204ENST00000558020 C11orf44Q8N8P7 122 aa11.02□□□□□ -0.65
SNRPA1-204ENST00000558020 DNAAF1Q8NEP3 725 aa11.02□□□□□ -0.65
SNRPA1-204ENST00000558020 OR4S1Q8NGB4 309 aa11.02□□□□□ -0.65
SNRPA1-204ENST00000558020 PIFOQ8TCI5 191 aa11.02□□□□□ -0.65
SNRPA1-204ENST00000558020 ZNF714Q96N38 554 aa11.02□□□□□ -0.65
SNRPA1-204ENST00000558020 OSBPL10Q9BXB5 764 aa11.02□□□□□ -0.65
SNRPA1-204ENST00000558020 CADM1Q9BY67 442 aaKnown RBP11.02□□□□□ -0.65
SNRPA1-204ENST00000558020 CHST5Q9GZS9 411 aa11.02□□□□□ -0.65
SNRPA1-204ENST00000558020 GABARAPL1Q9H0R8 117 aa11.02□□□□□ -0.65
SNRPA1-204ENST00000558020 MTCH1Q9NZJ7 389 aa11.02□□□□□ -0.65
SNRPA1-204ENST00000558020 FOXJ3Q9UPW0 622 aa11.02□□□□□ -0.65
SNRPA1-204ENST00000558020 ZNF737O75373 536 aa11.01□□□□□ -0.65
SNRPA1-204ENST00000558020 ALDOBP05062 364 aa11.01□□□□□ -0.65
SNRPA1-204ENST00000558020 OCM2P0CE71 109 aa11.01□□□□□ -0.65
SNRPA1-204ENST00000558020 OCMP0CE72 109 aaPredicted RBP11.01□□□□□ -0.65
SNRPA1-204ENST00000558020 IGHV1-8P0DP01 117 aa11.01□□□□□ -0.65
SNRPA1-204ENST00000558020 PRKACBP22694 351 aa11.01□□□□□ -0.65
SNRPA1-204ENST00000558020 PAX6P26367 422 aa11.01□□□□□ -0.65
SNRPA1-204ENST00000558020 DYNLT3P51808 116 aa11.01□□□□□ -0.65
SNRPA1-204ENST00000558020 DLX6P56179 175 aa11.01□□□□□ -0.65
SNRPA1-204ENST00000558020 MTCP1P56278 107 aa11.01□□□□□ -0.65
SNRPA1-204ENST00000558020 MINOS1Q5TGZ0 78 aa11.01□□□□□ -0.65
SNRPA1-204ENST00000558020 TMEM244Q5VVB8 128 aa11.01□□□□□ -0.65
SNRPA1-204ENST00000558020 C1orf146Q5VVC0 180 aa11.01□□□□□ -0.65
SNRPA1-204ENST00000558020 ZNF626Q68DY1 528 aa11.01□□□□□ -0.65
SNRPA1-204ENST00000558020 LHFPL4Q7Z7J7 247 aa11.01□□□□□ -0.65
SNRPA1-204ENST00000558020 EMG1Q92979 244 aaKnown RBP11.01□□□□□ -0.65
SNRPA1-204ENST00000558020 SLAMF9Q96A28 289 aa11.01□□□□□ -0.65
SNRPA1-204ENST00000558020 MYCBPQ99417 103 aaPredicted RBP11.01□□□□□ -0.65
SNRPA1-204ENST00000558020 CIB1Q99828 191 aa11.01□□□□□ -0.65
SNRPA1-204ENST00000558020 TCF19Q9Y242 345 aa11.01□□□□□ -0.65
SNRPA1-204ENST00000558020 MINOS1-NBL1R4GNA1 71 aa11.01□□□□□ -0.65
SNRPA1-204ENST00000558020 FUOMA2VDF0 154 aa11□□□□□ -0.65
SNRPA1-204ENST00000558020 F2RL2O00254 374 aa11□□□□□ -0.65
SNRPA1-204ENST00000558020 XPNPEP2O43895 674 aa11□□□□□ -0.65
SNRPA1-204ENST00000558020 CHST1O43916 411 aa11□□□□□ -0.65
SNRPA1-204ENST00000558020 FBXO24O75426 580 aa11□□□□□ -0.65
SNRPA1-204ENST00000558020 INMTO95050 263 aa11□□□□□ -0.65
SNRPA1-204ENST00000558020 GABRR1P24046 479 aa11□□□□□ -0.65
SNRPA1-204ENST00000558020 RAB13P51153 203 aa11□□□□□ -0.65
SNRPA1-204ENST00000558020 CDC42P60953 191 aa11□□□□□ -0.65
SNRPA1-204ENST00000558020 ACTA2P62736 377 aa11□□□□□ -0.65
SNRPA1-204ENST00000558020 ACTG2P63267 376 aa11□□□□□ -0.65
SNRPA1-204ENST00000558020 ACTC1P68032 377 aa11□□□□□ -0.65
SNRPA1-204ENST00000558020 ACTA1P68133 377 aa11□□□□□ -0.65
SNRPA1-204ENST00000558020 BNIP1Q12981 228 aa11□□□□□ -0.65
SNRPA1-204ENST00000558020 IL18R1Q13478 541 aa11□□□□□ -0.65
SNRPA1-204ENST00000558020 EDDM3AQ14507 147 aa11□□□□□ -0.65
SNRPA1-204ENST00000558020 GRK1Q15835 563 aa11□□□□□ -0.65
SNRPA1-204ENST00000558020 PLA1AQ53H76 456 aa11□□□□□ -0.65
SNRPA1-204ENST00000558020 OR52W1Q6IF63 320 aa11□□□□□ -0.65
SNRPA1-204ENST00000558020 SSX6Q7RTT6 188 aa11□□□□□ -0.65
SNRPA1-204ENST00000558020 REC114Q7Z4M0 266 aa11□□□□□ -0.65
SNRPA1-204ENST00000558020 AMIGO2Q86SJ2 522 aa11□□□□□ -0.65
SNRPA1-204ENST00000558020 Q8N2B8 174 aa11□□□□□ -0.65
SNRPA1-204ENST00000558020 ZNF676Q8N7Q3 588 aa11□□□□□ -0.65
SNRPA1-204ENST00000558020 TRUB1Q8WWH5 349 aaKnown RBP11□□□□□ -0.65
SNRPA1-204ENST00000558020 CENPNQ96H22 339 aaPredicted RBP11□□□□□ -0.65
SNRPA1-204ENST00000558020 NEK6Q9HC98 313 aa11□□□□□ -0.65
SNRPA1-204ENST00000558020 IMPAD1Q9NX62 359 aa11□□□□□ -0.65
SNRPA1-204ENST00000558020 GNG8Q9UK08 70 aa11□□□□□ -0.65
SNRPA1-204ENST00000558020 PCDHGB5Q9Y5G0 923 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms