RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 SIGIRRQ6IA17 410 aa10.65□□□□□ -0.71
SHMT2-233ENST00000557529 C6orf201Q7Z4U5 140 aa10.65□□□□□ -0.71
SHMT2-233ENST00000557529 RTN4RL2Q86UN3 420 aa10.65□□□□□ -0.71
SHMT2-233ENST00000557529 HOGA1Q86XE5 327 aa10.65□□□□□ -0.71
SHMT2-233ENST00000557529 GVQW1Q8N7I0 195 aa10.65□□□□□ -0.71
SHMT2-233ENST00000557529 OR4S1Q8NGB4 309 aa10.65□□□□□ -0.71
SHMT2-233ENST00000557529 OR4D10Q8NGI6 311 aa10.65□□□□□ -0.71
SHMT2-233ENST00000557529 OR51S1Q8NGJ8 323 aa10.65□□□□□ -0.71
SHMT2-233ENST00000557529 OR13G1Q8NGZ3 307 aa10.65□□□□□ -0.71
SHMT2-233ENST00000557529 HPS1Q92902 700 aa10.65□□□□□ -0.71
SHMT2-233ENST00000557529 EMG1Q92979 244 aaKnown RBP10.65□□□□□ -0.71
SHMT2-233ENST00000557529 PRRT1Q99946 306 aa10.65□□□□□ -0.71
SHMT2-233ENST00000557529 SLC25A21Q9BQT8 299 aaPredicted RBP10.65□□□□□ -0.71
SHMT2-233ENST00000557529 CXXC4Q9H2H0 198 aa10.65□□□□□ -0.71
SHMT2-233ENST00000557529 NGBQ9NPG2 151 aa10.65□□□□□ -0.71
SHMT2-233ENST00000557529 NPDC1Q9NQX5 325 aaPredicted RBP10.65□□□□□ -0.71
SHMT2-233ENST00000557529 CHD8Q9HCK8 2581 aa10.64□□□□□ -0.71
SHMT2-233ENST00000557529 A0A1B0GWJ7 208 aa10.64□□□□□ -0.71
SHMT2-233ENST00000557529 M0QYG6 137 aa10.64□□□□□ -0.71
SHMT2-233ENST00000557529 SYNGR1O43759 233 aa10.64□□□□□ -0.71
SHMT2-233ENST00000557529 FCER2P06734 321 aa10.64□□□□□ -0.71
SHMT2-233ENST00000557529 ACAA1P09110 424 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-233ENST00000557529 ZNF250P15622 560 aa10.64□□□□□ -0.71
SHMT2-233ENST00000557529 DTYMKP23919 212 aa10.64□□□□□ -0.71
SHMT2-233ENST00000557529 MECP2P51608 486 aaKnown RBP10.64□□□□□ -0.71
SHMT2-233ENST00000557529 TAS2R46P59540 309 aa10.64□□□□□ -0.71
SHMT2-233ENST00000557529 IL13RA2Q14627 380 aa10.64□□□□□ -0.71
SHMT2-233ENST00000557529 BPIFB2Q8N4F0 458 aa10.64□□□□□ -0.71
SHMT2-233ENST00000557529 SCCPDHQ8NBX0 429 aa10.64□□□□□ -0.71
SHMT2-233ENST00000557529 OR10AD1Q8NGE0 317 aa10.64□□□□□ -0.71
SHMT2-233ENST00000557529 OR4K15Q8NH41 348 aa10.64□□□□□ -0.71
SHMT2-233ENST00000557529 FBXW5Q969U6 566 aa10.64□□□□□ -0.71
SHMT2-233ENST00000557529 GINS4Q9BRT9 223 aa10.64□□□□□ -0.71
SHMT2-233ENST00000557529 TINAGL1Q9GZM7 467 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-233ENST00000557529 CHST6Q9GZX3 395 aa10.64□□□□□ -0.71
SHMT2-233ENST00000557529 SPACA1Q9HBV2 294 aa10.64□□□□□ -0.71
SHMT2-233ENST00000557529 SLC2A8Q9NY64 477 aa10.64□□□□□ -0.71
SHMT2-233ENST00000557529 COQ3Q9NZJ6 369 aa10.64□□□□□ -0.71
SHMT2-233ENST00000557529 EDARQ9UNE0 448 aa10.64□□□□□ -0.71
SHMT2-233ENST00000557529 A0A1B0GUH1 482 aa10.63□□□□□ -0.71
SHMT2-233ENST00000557529 ATP6V1G2-DDX39BF2Z307 99 aa10.63□□□□□ -0.71
SHMT2-233ENST00000557529 ARPC1BO15143 372 aaKnown RBP10.63□□□□□ -0.71
SHMT2-233ENST00000557529 CCNKO75909 580 aa10.63□□□□□ -0.71
SHMT2-233ENST00000557529 OR7C1O76099 320 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-233ENST00000557529 IGHV3-13P01766 116 aa10.63□□□□□ -0.71
SHMT2-233ENST00000557529 IFNA6P05013 189 aa10.63□□□□□ -0.71
SHMT2-233ENST00000557529 ZNF735P0CB33 412 aa10.63□□□□□ -0.71
SHMT2-233ENST00000557529 AMY2BP19961 511 aa10.63□□□□□ -0.71
SHMT2-233ENST00000557529 KLF3P57682 345 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-233ENST00000557529 SELENOVP59797 346 aa10.63□□□□□ -0.71
SHMT2-233ENST00000557529 C11orf91Q3C1V1 193 aa10.63□□□□□ -0.71
SHMT2-233ENST00000557529 FBXL19-AS1Q494R0 122 aa10.63□□□□□ -0.71
SHMT2-233ENST00000557529 VAX1Q5SQQ9 334 aa10.63□□□□□ -0.71
SHMT2-233ENST00000557529 OR52W1Q6IF63 320 aa10.63□□□□□ -0.71
SHMT2-233ENST00000557529 IDO2Q6ZQW0 420 aa10.63□□□□□ -0.71
SHMT2-233ENST00000557529 WDR86Q86TI4 376 aa10.63□□□□□ -0.71
SHMT2-233ENST00000557529 WFDC8Q8IUA0 241 aa10.63□□□□□ -0.71
SHMT2-233ENST00000557529 FAM58AQ8N1B3 248 aa10.63□□□□□ -0.71
SHMT2-233ENST00000557529 NUP37Q8NFH4 326 aa10.63□□□□□ -0.71
SHMT2-233ENST00000557529 BEST4Q8NFU0 473 aa10.63□□□□□ -0.71
SHMT2-233ENST00000557529 SNAPC3Q92966 411 aa10.63□□□□□ -0.71
SHMT2-233ENST00000557529 LRRC46Q96FV0 321 aa10.63□□□□□ -0.71
SHMT2-233ENST00000557529 RADILQ96JH8 1075 aa10.63□□□□□ -0.71
SHMT2-233ENST00000557529 CMSS1Q9BQ75 279 aaKnown RBP10.63□□□□□ -0.71
SHMT2-233ENST00000557529 SULT4A1Q9BR01 284 aa10.63□□□□□ -0.71
SHMT2-233ENST00000557529 FAAP24Q9BTP7 215 aa10.63□□□□□ -0.71
SHMT2-233ENST00000557529 AK3Q9UIJ7 227 aa10.63□□□□□ -0.71
SHMT2-233ENST00000557529 FZR1Q9UM11 496 aa10.63□□□□□ -0.71
SHMT2-233ENST00000557529 IGLV3-9A0A075B6K5 115 aa10.62□□□□□ -0.71
SHMT2-233ENST00000557529 A0A0A6YYJ9 748 aa10.62□□□□□ -0.71
SHMT2-233ENST00000557529 H0YL77 283 aa10.62□□□□□ -0.71
SHMT2-233ENST00000557529 MLNRO43193 412 aa10.62□□□□□ -0.71
SHMT2-233ENST00000557529 IL5P05113 134 aa10.62□□□□□ -0.71
SHMT2-233ENST00000557529 GLAP06280 429 aa10.62□□□□□ -0.71
SHMT2-233ENST00000557529 PRKACAP17612 351 aa10.62□□□□□ -0.71
SHMT2-233ENST00000557529 HRH1P35367 487 aa10.62□□□□□ -0.71
SHMT2-233ENST00000557529 SNU13P55769 128 aaKnown RBP10.62□□□□□ -0.71
SHMT2-233ENST00000557529 RRAS2P62070 204 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-233ENST00000557529 ZNF154Q13106 437 aa10.62□□□□□ -0.71
SHMT2-233ENST00000557529 ATAD3CQ5T2N8 411 aa10.62□□□□□ -0.71
SHMT2-233ENST00000557529 METTL11BQ5VVY1 283 aa10.62□□□□□ -0.71
SHMT2-233ENST00000557529 C22orf34Q6ZV56 151 aa10.62□□□□□ -0.71
SHMT2-233ENST00000557529 ARRDC1Q8N5I2 433 aa10.62□□□□□ -0.71
SHMT2-233ENST00000557529 OR5H2Q8NGV7 314 aa10.62□□□□□ -0.71
SHMT2-233ENST00000557529 TMEM171Q8WVE6 324 aa10.62□□□□□ -0.71
SHMT2-233ENST00000557529 GIMAP1Q8WWP7 306 aa10.62□□□□□ -0.71
SHMT2-233ENST00000557529 MED30Q96HR3 178 aa10.62□□□□□ -0.71
SHMT2-233ENST00000557529 SLC6A7Q99884 636 aa10.62□□□□□ -0.71
SHMT2-233ENST00000557529 ST6GALNAC5Q9BVH7 336 aa10.62□□□□□ -0.71
SHMT2-233ENST00000557529 OR51J1Q9H342 316 aa10.62□□□□□ -0.71
SHMT2-233ENST00000557529 GHITMQ9H3K2 345 aa10.62□□□□□ -0.71
SHMT2-233ENST00000557529 ZNF442Q9H7R0 627 aa10.62□□□□□ -0.71
SHMT2-233ENST00000557529 GPN1Q9HCN4 374 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-233ENST00000557529 RCC2Q9P258 522 aaKnown RBP10.62□□□□□ -0.71
SHMT2-233ENST00000557529 DUSP13Q9UII6 198 aa10.62□□□□□ -0.71
SHMT2-233ENST00000557529 FLVCR2Q9UPI3 526 aa10.62□□□□□ -0.71
SHMT2-233ENST00000557529 POLEQ07864 2286 aa10.61□□□□□ -0.71
SHMT2-233ENST00000557529 BOD1L1Q8NFC6 3051 aa10.61□□□□□ -0.71
SHMT2-233ENST00000557529 PLSCR5A0PG75 271 aa10.61□□□□□ -0.71
SHMT2-233ENST00000557529 F8VVB4 439 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms