RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 FAM90A5PA8MXJ8 464 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 EVPLLA8MZ36 301 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 RFPL4AL1F8VTS6 287 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 H3BNX3 289 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 M0R135 149 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 AP4M1O00189 453 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 PSMD9O00233 223 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 SDHDO14521 159 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 AKR7A2O43488 359 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 MTRF1O75570 445 aaKnown RBP3.63□□□□□ -1.83
SCFD1-223ENST00000557076 TOMM40O96008 361 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 IGHG2P01859 326 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 TFF1P04155 84 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 FAM90A15PP0C7V4 464 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 FAM90A14PP0C7W9 464 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 FAM106CPP0CH98 169 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 ZNF823P16415 610 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 CD24P25063 80 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 HTR1DP28221 377 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 CRABP1P29762 137 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 CASQ1P31415 396 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 PRDX2P32119 198 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 KIR3DL2P43630 455 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 SLC9A3P48764 834 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 ARHGDIBP52566 201 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 CAPZA1P52907 286 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 TAS2R41P59536 307 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 GMFBP60983 142 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 FAM3AP98173 230 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 ZNF91Q05481 1191 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 DEFB136Q30KP8 78 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 RFX4Q33E94 735 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 SLC36A3Q495N2 470 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 MESTQ5EB52 335 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 C9orf152Q5JTZ5 239 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 GLYATL3Q5SZD4 288 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 AGBL2Q5U5Z8 902 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 ZBTB49Q6ZSB9 765 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 PATL1Q86TB9 770 aaKnown RBP3.63□□□□□ -1.83
SCFD1-223ENST00000557076 MSRB3Q8IXL7 192 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 RNF113BQ8IZP6 322 aaKnown RBP3.63□□□□□ -1.83
SCFD1-223ENST00000557076 ZNF561Q8N587 486 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 DPP10Q8N608 796 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 C11orf65Q8NCR3 313 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 TMEM185AQ8NFB2 350 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 OR4M1Q8NGD0 313 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 OR2AJ1Q8NGZ0 328 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 OR2AE1Q8NHA4 323 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 ZNF671Q8TAW3 534 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 BCAS4Q8TDM0 211 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 RASSF5Q8WWW0 418 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 ST6GALNAC6Q969X2 333 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 ZNF799Q96GE5 643 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 Q96M85 177 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 NOL4LQ96MY1 436 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-223ENST00000557076 SORT1Q99523 831 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 MICU1Q9BPX6 476 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 GON7Q9BXV9 100 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 C1orf21Q9H246 121 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 SYT4Q9H2B2 425 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 RERGLQ9H628 205 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 YY1AP1Q9H869 796 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 PAPOLBQ9NRJ5 636 aaKnown RBP3.63□□□□□ -1.83
SCFD1-223ENST00000557076 VAPAQ9P0L0 249 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 DPM3Q9P2X0 92 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 KCNG2Q9UJ96 466 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 ADAM18Q9Y3Q7 739 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 SRRM2Q9UQ35 2752 aaKnown RBP3.62□□□□□ -1.83
SCFD1-223ENST00000557076 TRAV27A0A087WT01 109 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 TRBV5-3A0A0A0MS03 114 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 IGHV2-26A0A0B4J1V2 119 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 MAGEA13PA6NCF6 341 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 SH2D7A6NKC9 451 aaPredicted RBP3.62□□□□□ -1.83
SCFD1-223ENST00000557076 TRPC5OSA6NMA1 111 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 ANXA2P2A6NMY6 339 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 SERPINE3A8MV23 424 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 SLC1A7O00341 560 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 DCTN6O00399 190 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 SLC22A2O15244 555 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 BIRC5O15392 142 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 XRCC2O43543 280 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 TYROBPO43914 113 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 SPAG7O75391 227 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 INMTO95050 263 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 TXNDC12O95881 172 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 SHBGP04278 402 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 OR8U8P0C7N1 319 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 PSG1P11464 419 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 IFI30P13284 250 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 GLRA1P23415 457 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 CFL1P23528 166 aaKnown RBP3.62□□□□□ -1.83
SCFD1-223ENST00000557076 DCTDP32321 178 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 CDKN2AP42771 156 aaKnown RBP3.62□□□□□ -1.83
SCFD1-223ENST00000557076 SLC1A6P48664 564 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 CENPAP49450 140 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 ACTA2P62736 377 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 ACTG2P63267 376 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 ACTC1P68032 377 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 ACTA1P68133 377 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 RUNX1Q01196 453 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms