RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 CSF3P09919 207 aa20.1■□□□□ 0.81
SIX4-203ENST00000556952 IL7P13232 177 aa20.1■□□□□ 0.81
SIX4-203ENST00000556952 DAZAP2Q15038 168 aaPredicted RBP20.1■□□□□ 0.81
SIX4-203ENST00000556952 BAK1Q16611 211 aa20.1■□□□□ 0.81
SIX4-203ENST00000556952 SMIM4Q8WVI0 70 aa20.1■□□□□ 0.81
SIX4-203ENST00000556952 MEGF10Q96KG7 1140 aa20.1■□□□□ 0.81
SIX4-203ENST00000556952 OR2V2Q96R30 315 aa20.1■□□□□ 0.81
SIX4-203ENST00000556952 GABARAPH6UMI1 98 aa20.09■□□□□ 0.81
SIX4-203ENST00000556952 RHBDL1O75783 438 aa20.09■□□□□ 0.81
SIX4-203ENST00000556952 PGA5P0DJD9 388 aa20.09■□□□□ 0.81
SIX4-203ENST00000556952 SSTR2P30874 369 aa20.09■□□□□ 0.81
SIX4-203ENST00000556952 RBM11P57052 281 aaKnown RBP20.09■□□□□ 0.81
SIX4-203ENST00000556952 KRTAP10-9P60411 292 aa20.09■□□□□ 0.81
SIX4-203ENST00000556952 PRAMEF6Q5VXH4 476 aa20.09■□□□□ 0.81
SIX4-203ENST00000556952 FBXL14Q8N1E6 418 aa20.09■□□□□ 0.81
SIX4-203ENST00000556952 RBFOX1Q9NWB1 397 aaKnown RBP20.09■□□□□ 0.81
SIX4-203ENST00000556952 CSMD2Q7Z408 3487 aa20.09■□□□□ 0.81
SIX4-203ENST00000556952 POLQO75417 2590 aa20.09■□□□□ 0.81
SIX4-203ENST00000556952 FAM221AA4D161 298 aa20.08■□□□□ 0.81
SIX4-203ENST00000556952 FAM90A10PA6NDY2 464 aa20.08■□□□□ 0.81
SIX4-203ENST00000556952 FAM90A18PA6NE21 464 aa20.08■□□□□ 0.81
SIX4-203ENST00000556952 FAM90A16PA6NEW6 464 aa20.08■□□□□ 0.81
SIX4-203ENST00000556952 FAM90A20PA6NIJ5 464 aa20.08■□□□□ 0.81
SIX4-203ENST00000556952 FAM90A8PA6NJQ4 464 aa20.08■□□□□ 0.81
SIX4-203ENST00000556952 FAM90A7PA6NKC0 464 aa20.08■□□□□ 0.81
SIX4-203ENST00000556952 A6NLC8 198 aa20.08■□□□□ 0.81
SIX4-203ENST00000556952 FOXI3A8MTJ6 420 aaPredicted RBP20.08■□□□□ 0.81
SIX4-203ENST00000556952 C17orf100A8MU93 164 aa20.08■□□□□ 0.81
SIX4-203ENST00000556952 FAM90A22PA8MWA6 464 aa20.08■□□□□ 0.81
SIX4-203ENST00000556952 FAM90A12PA8MX19 464 aa20.08■□□□□ 0.81
SIX4-203ENST00000556952 FAM90A5PA8MXJ8 464 aa20.08■□□□□ 0.81
SIX4-203ENST00000556952 FAM90A23PA8MXZ1 464 aa20.08■□□□□ 0.81
SIX4-203ENST00000556952 NOS1APO75052 506 aaPredicted RBP20.08■□□□□ 0.81
SIX4-203ENST00000556952 CD55P08174 381 aa20.08■□□□□ 0.81
SIX4-203ENST00000556952 FAM90A15PP0C7V4 464 aa20.08■□□□□ 0.81
SIX4-203ENST00000556952 FAM90A13PP0C7W8 464 aa20.08■□□□□ 0.81
SIX4-203ENST00000556952 FAM90A14PP0C7W9 464 aa20.08■□□□□ 0.81
SIX4-203ENST00000556952 FAM90A24PP0C7X0 464 aa20.08■□□□□ 0.81
SIX4-203ENST00000556952 GATA4P43694 442 aa20.08■□□□□ 0.81
SIX4-203ENST00000556952 IFITM3Q01628 133 aa20.08■□□□□ 0.81
SIX4-203ENST00000556952 ARL6IP1Q15041 203 aa20.08■□□□□ 0.81
SIX4-203ENST00000556952 TRIQKQ629K1 86 aa20.08■□□□□ 0.81
SIX4-203ENST00000556952 C11orf53Q8IXP5 236 aa20.08■□□□□ 0.81
SIX4-203ENST00000556952 POC1AQ8NBT0 407 aa20.08■□□□□ 0.81
SIX4-203ENST00000556952 RAB3CQ96E17 227 aa20.08■□□□□ 0.81
SIX4-203ENST00000556952 AUNIPQ9H7T9 357 aa20.08■□□□□ 0.81
SIX4-203ENST00000556952 ST3GAL6Q9Y274 331 aa20.08■□□□□ 0.81
SIX4-203ENST00000556952 CHD3Q12873 2000 aaKnown RBP20.08■□□□□ 0.8
SIX4-203ENST00000556952 ISPDA4D126 451 aa20.08■□□□□ 0.8
SIX4-203ENST00000556952 SOCS1O15524 211 aa20.08■□□□□ 0.8
SIX4-203ENST00000556952 ERVK11-1P61568 191 aa20.08■□□□□ 0.8
SIX4-203ENST00000556952 TNFAIP6P98066 277 aaPredicted RBP20.08■□□□□ 0.8
SIX4-203ENST00000556952 ZNF260Q3ZCT1 412 aa20.08■□□□□ 0.8
SIX4-203ENST00000556952 FAM209AQ5JX71 171 aa20.08■□□□□ 0.8
SIX4-203ENST00000556952 HACD4Q5VWC8 232 aa20.08■□□□□ 0.8
SIX4-203ENST00000556952 STEAP3Q658P3 488 aa20.08■□□□□ 0.8
SIX4-203ENST00000556952 LINC00596Q86U02 117 aa20.08■□□□□ 0.8
SIX4-203ENST00000556952 LYSMD2Q8IV50 215 aa20.08■□□□□ 0.8
SIX4-203ENST00000556952 MUC15Q8N387 334 aa20.08■□□□□ 0.8
SIX4-203ENST00000556952 CHST4Q8NCG5 386 aa20.08■□□□□ 0.8
SIX4-203ENST00000556952 NRIP2Q9BQI9 281 aa20.08■□□□□ 0.8
SIX4-203ENST00000556952 CSMD1Q96PZ7 3565 aa20.07■□□□□ 0.8
SIX4-203ENST00000556952 GSTP1P09211 210 aaKnown RBP20.07■□□□□ 0.8
SIX4-203ENST00000556952 HIST1H1DP16402 221 aaKnown RBP20.07■□□□□ 0.8
SIX4-203ENST00000556952 GABRR1P24046 479 aa20.07■□□□□ 0.8
SIX4-203ENST00000556952 MPPED2Q15777 294 aa20.07■□□□□ 0.8
SIX4-203ENST00000556952 PIGYQ3MUY2 71 aa20.07■□□□□ 0.8
SIX4-203ENST00000556952 WDR82Q6UXN9 313 aa20.07■□□□□ 0.8
SIX4-203ENST00000556952 DNM1P46Q6ZS02 220 aa20.07■□□□□ 0.8
SIX4-203ENST00000556952 FAM58AQ8N1B3 248 aa20.07■□□□□ 0.8
SIX4-203ENST00000556952 FCAMRQ8WWV6 532 aa20.07■□□□□ 0.8
SIX4-203ENST00000556952 EMG1Q92979 244 aaKnown RBP20.07■□□□□ 0.8
SIX4-203ENST00000556952 FBXW5Q969U6 566 aa20.07■□□□□ 0.8
SIX4-203ENST00000556952 ERGIC1Q969X5 290 aa20.07■□□□□ 0.8
SIX4-203ENST00000556952 THAP7Q9BT49 309 aaPredicted RBP20.07■□□□□ 0.8
SIX4-203ENST00000556952 MS4A5Q9H3V2 200 aa20.07■□□□□ 0.8
SIX4-203ENST00000556952 FN3KRPQ9HA64 309 aa20.07■□□□□ 0.8
SIX4-203ENST00000556952 DYNLRB1Q9NP97 96 aa20.07■□□□□ 0.8
SIX4-203ENST00000556952 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.07■□□□□ 0.8
SIX4-203ENST00000556952 FBXO9Q9UK97 447 aaPredicted RBP20.07■□□□□ 0.8
SIX4-203ENST00000556952 IGHV3-64DA0A0J9YX35 117 aa20.06■□□□□ 0.8
SIX4-203ENST00000556952 F8VVB4 439 aa20.06■□□□□ 0.8
SIX4-203ENST00000556952 F8VWA3 439 aa20.06■□□□□ 0.8
SIX4-203ENST00000556952 SULT1C2O00338 296 aa20.06■□□□□ 0.8
SIX4-203ENST00000556952 BLVRBP30043 206 aaPredicted RBP20.06■□□□□ 0.8
SIX4-203ENST00000556952 PRSS3P35030 304 aa20.06■□□□□ 0.8
SIX4-203ENST00000556952 DGCR2P98153 550 aa20.06■□□□□ 0.8
SIX4-203ENST00000556952 SCN1BQ07699 218 aa20.06■□□□□ 0.8
SIX4-203ENST00000556952 TESK1Q15569 626 aa20.06■□□□□ 0.8
SIX4-203ENST00000556952 TAF9Q16594 264 aa20.06■□□□□ 0.8
SIX4-203ENST00000556952 MST1LQ2TV78 715 aa20.06■□□□□ 0.8
SIX4-203ENST00000556952 OR10Z1Q8NGY1 313 aa20.06■□□□□ 0.8
SIX4-203ENST00000556952 ITLN1Q8WWA0 313 aa20.06■□□□□ 0.8
SIX4-203ENST00000556952 YIPF5Q969M3 257 aa20.06■□□□□ 0.8
SIX4-203ENST00000556952 TRIM63Q969Q1 353 aa20.06■□□□□ 0.8
SIX4-203ENST00000556952 ZNF488Q96MN9 340 aa20.06■□□□□ 0.8
SIX4-203ENST00000556952 SCPEP1Q9HB40 452 aa20.06■□□□□ 0.8
SIX4-203ENST00000556952 NOTCH2Q04721 2471 aa20.06■□□□□ 0.8
SIX4-203ENST00000556952 AKAP6Q13023 2319 aa20.05■□□□□ 0.8
SIX4-203ENST00000556952 A0A1W2PPR1 153 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms