RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 SPHARQ15513 63 aa3.9□□□□□ -1.79
HIF1A-209ENST00000556827 C9orf66Q5T8R8 295 aa3.9□□□□□ -1.79
HIF1A-209ENST00000556827 LEMD1Q68G75 181 aa3.9□□□□□ -1.79
HIF1A-209ENST00000556827 REEP3Q6NUK4 255 aa3.9□□□□□ -1.79
HIF1A-209ENST00000556827 TTC33Q6PID6 262 aaPredicted RBP3.9□□□□□ -1.79
HIF1A-209ENST00000556827 BTNL3Q6UXE8 466 aa3.9□□□□□ -1.79
HIF1A-209ENST00000556827 ZNF730Q6ZMV8 503 aa3.9□□□□□ -1.79
HIF1A-209ENST00000556827 SLC35D2Q76EJ3 337 aa3.9□□□□□ -1.79
HIF1A-209ENST00000556827 SKA3Q8IX90 412 aa3.9□□□□□ -1.79
HIF1A-209ENST00000556827 SIGLECL1Q8N7X8 197 aa3.9□□□□□ -1.79
HIF1A-209ENST00000556827 ZDHHC22Q8N966 263 aa3.9□□□□□ -1.79
HIF1A-209ENST00000556827 CCDC197Q8NCU1 140 aa3.9□□□□□ -1.79
HIF1A-209ENST00000556827 ZNRF1Q8ND25 227 aa3.9□□□□□ -1.79
HIF1A-209ENST00000556827 OR4K5Q8NGD3 323 aa3.9□□□□□ -1.79
HIF1A-209ENST00000556827 C8orf46Q8TAG6 207 aa3.9□□□□□ -1.79
HIF1A-209ENST00000556827 GGHQ92820 318 aa3.9□□□□□ -1.79
HIF1A-209ENST00000556827 SLC41A3Q96GZ6 507 aa3.9□□□□□ -1.79
HIF1A-209ENST00000556827 SLC25A44Q96H78 314 aaPredicted RBP3.9□□□□□ -1.79
HIF1A-209ENST00000556827 TEX37Q96LM6 180 aa3.9□□□□□ -1.79
HIF1A-209ENST00000556827 CCT8L2Q96SF2 557 aa3.9□□□□□ -1.79
HIF1A-209ENST00000556827 SH3GL3Q99963 347 aa3.9□□□□□ -1.79
HIF1A-209ENST00000556827 SLC30A2Q9BRI3 323 aa3.9□□□□□ -1.79
HIF1A-209ENST00000556827 TMEM43Q9BTV4 400 aa3.9□□□□□ -1.79
HIF1A-209ENST00000556827 ELOVL3Q9HB03 270 aa3.9□□□□□ -1.79
HIF1A-209ENST00000556827 BEX1Q9HBH7 125 aa3.9□□□□□ -1.79
HIF1A-209ENST00000556827 NANSQ9NR45 359 aa3.9□□□□□ -1.79
HIF1A-209ENST00000556827 PLEK2Q9NYT0 353 aa3.9□□□□□ -1.79
HIF1A-209ENST00000556827 MYEF2Q9P2K5 600 aaKnown RBP3.9□□□□□ -1.79
HIF1A-209ENST00000556827 STX18Q9P2W9 335 aaKnown RBP3.9□□□□□ -1.79
HIF1A-209ENST00000556827 SEC14L4Q9UDX3 406 aa3.9□□□□□ -1.79
HIF1A-209ENST00000556827 OR5V1Q9UGF6 321 aa3.9□□□□□ -1.79
HIF1A-209ENST00000556827 UBQLN2Q9UHD9 624 aa3.9□□□□□ -1.79
HIF1A-209ENST00000556827 CR1P17927 2039 aa3.9□□□□□ -1.79
HIF1A-209ENST00000556827 ABCA1O95477 2261 aa3.9□□□□□ -1.79
HIF1A-209ENST00000556827 C13orf42A0A1B0GVH6 325 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 C5orf49A4QMS7 147 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 TIMM8AO60220 97 aaPredicted RBP3.89□□□□□ -1.79
HIF1A-209ENST00000556827 FMO6PO60774 539 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 SNAP29O95721 258 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 IGHV1-46P01743 117 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 IGHMP01871 453 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 BGLAPP02818 100 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 IGFBP1P08833 259 aaPredicted RBP3.89□□□□□ -1.79
HIF1A-209ENST00000556827 CCL2P13500 99 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 BGNP21810 368 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 TUBG1P23258 451 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 IL12AP29459 219 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 FHITP49789 147 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 DAP3P51398 398 aaKnown RBP3.89□□□□□ -1.79
HIF1A-209ENST00000556827 RIDAP52758 137 aaKnown RBP3.89□□□□□ -1.79
HIF1A-209ENST00000556827 SNU13P55769 128 aaKnown RBP3.89□□□□□ -1.79
HIF1A-209ENST00000556827 TNFAIP6P98066 277 aaPredicted RBP3.89□□□□□ -1.79
HIF1A-209ENST00000556827 CDK6Q00534 326 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 GLO1Q04760 184 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 BST1Q10588 318 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 OR1Q1Q15612 314 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 SGCAQ16586 387 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 PHYHD1Q5SRE7 291 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 THEM4Q5T1C6 240 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 C11orf88Q6PI97 169 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 DHRS4L2Q6PKH6 230 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 NANOGNBQ7Z5D8 188 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 LAX1Q8IWV1 398 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 LRRC18Q8N456 261 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 OR52E2Q8NGJ4 325 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 OR4F5Q8NH21 305 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 TMEM54Q969K7 222 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 MAL2Q969L2 176 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 TOMM40LQ969M1 308 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 PLEKHA8Q96JA3 519 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 ZNF75AQ96N20 296 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 RBP7Q96R05 134 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 TMEM109Q9BVC6 243 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 SLITRK2Q9H156 845 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 WDR55Q9H6Y2 383 aaPredicted RBP3.89□□□□□ -1.79
HIF1A-209ENST00000556827 SIAEQ9HAT2 523 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 RNPEPL1Q9HAU8 725 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 TUBG2Q9NRH3 451 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 TMEM38BQ9NVV0 291 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 NKIRAS1Q9NYS0 192 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 IL20RAQ9UHF4 553 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 LEF1Q9UJU2 399 aaPredicted RBP3.89□□□□□ -1.79
HIF1A-209ENST00000556827 PURGQ9UJV8 347 aaKnown RBP3.89□□□□□ -1.79
HIF1A-209ENST00000556827 ZNF229Q9UJW7 825 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 ANGPT4Q9Y264 503 aa3.89□□□□□ -1.79
HIF1A-209ENST00000556827 ROS1P08922 2347 aa3.88□□□□□ -1.79
HIF1A-209ENST00000556827 IGKV1D-42A0A075B6H8 117 aa3.88□□□□□ -1.79
HIF1A-209ENST00000556827 A0A0B4J2E0 115 aa3.88□□□□□ -1.79
HIF1A-209ENST00000556827 A0A1B0GX12 115 aa3.88□□□□□ -1.79
HIF1A-209ENST00000556827 LRRC30A6NM36 301 aa3.88□□□□□ -1.79
HIF1A-209ENST00000556827 CENPBD1B2RD01 187 aa3.88□□□□□ -1.79
HIF1A-209ENST00000556827 H3BSA7 217 aa3.88□□□□□ -1.79
HIF1A-209ENST00000556827 CLDN34H7C241 214 aa3.88□□□□□ -1.79
HIF1A-209ENST00000556827 SDHDO14521 159 aa3.88□□□□□ -1.79
HIF1A-209ENST00000556827 CHP2O43745 196 aa3.88□□□□□ -1.79
HIF1A-209ENST00000556827 SRSF10O75494 262 aaKnown RBP3.88□□□□□ -1.79
HIF1A-209ENST00000556827 MFN2O95140 757 aa3.88□□□□□ -1.79
HIF1A-209ENST00000556827 C1QCP02747 245 aa3.88□□□□□ -1.79
HIF1A-209ENST00000556827 HTR2AP28223 471 aa3.88□□□□□ -1.79
HIF1A-209ENST00000556827 AQP1P29972 269 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms