RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 DUS3LQ96G46 650 aaKnown RBP8.1□□□□□ -1.11
SCFD1-220ENST00000556486 RNF170Q96K19 258 aa8.1□□□□□ -1.11
SCFD1-220ENST00000556486 LYZL4Q96KX0 146 aa8.1□□□□□ -1.11
SCFD1-220ENST00000556486 OR5M11Q96RB7 305 aa8.1□□□□□ -1.11
SCFD1-220ENST00000556486 CITED2Q99967 270 aaPredicted RBP8.1□□□□□ -1.11
SCFD1-220ENST00000556486 NIPSNAP1Q9BPW8 284 aa8.1□□□□□ -1.11
SCFD1-220ENST00000556486 MED20Q9H944 212 aa8.1□□□□□ -1.11
SCFD1-220ENST00000556486 RAB18Q9NP72 206 aa8.1□□□□□ -1.11
SCFD1-220ENST00000556486 RASL12Q9NYN1 266 aa8.1□□□□□ -1.11
SCFD1-220ENST00000556486 DNAJC27Q9NZQ0 273 aa8.1□□□□□ -1.11
SCFD1-220ENST00000556486 ARL2BPQ9Y2Y0 163 aa8.1□□□□□ -1.11
SCFD1-220ENST00000556486 PCDHGB5Q9Y5G0 923 aa8.1□□□□□ -1.11
SCFD1-220ENST00000556486 U3KQV3 271 aa8.1□□□□□ -1.11
SCFD1-220ENST00000556486 TENM2Q9NT68 2774 aa8.1□□□□□ -1.11
SCFD1-220ENST00000556486 PGPEP1LA6NFU8 196 aa8.09□□□□□ -1.11
SCFD1-220ENST00000556486 VGLL3A8MV65 326 aa8.09□□□□□ -1.11
SCFD1-220ENST00000556486 ATP8B1O43520 1251 aa8.09□□□□□ -1.11
SCFD1-220ENST00000556486 CHST1O43916 411 aa8.09□□□□□ -1.11
SCFD1-220ENST00000556486 MTRF1O75570 445 aaKnown RBP8.09□□□□□ -1.11
SCFD1-220ENST00000556486 DCTN3O75935 186 aa8.09□□□□□ -1.11
SCFD1-220ENST00000556486 PLA2G1BP04054 148 aaKnown RBP8.09□□□□□ -1.11
SCFD1-220ENST00000556486 TFF1P04155 84 aa8.09□□□□□ -1.11
SCFD1-220ENST00000556486 PSG2P11465 335 aa8.09□□□□□ -1.11
SCFD1-220ENST00000556486 HOXB6P17509 224 aaKnown RBP8.09□□□□□ -1.11
SCFD1-220ENST00000556486 ALOX5APP20292 161 aa8.09□□□□□ -1.11
SCFD1-220ENST00000556486 SLC2A5P22732 501 aa8.09□□□□□ -1.11
SCFD1-220ENST00000556486 GLRA1P23415 457 aa8.09□□□□□ -1.11
SCFD1-220ENST00000556486 HOXD3P31249 432 aaPredicted RBP8.09□□□□□ -1.11
SCFD1-220ENST00000556486 PPP1R8Q12972 351 aaKnown RBP8.09□□□□□ -1.11
SCFD1-220ENST00000556486 LRRC75BQ2VPJ9 315 aa8.09□□□□□ -1.11
SCFD1-220ENST00000556486 CEACAM21Q3KPI0 293 aa8.09□□□□□ -1.11
SCFD1-220ENST00000556486 FAM98BQ52LJ0 330 aaKnown RBP8.09□□□□□ -1.11
SCFD1-220ENST00000556486 SLC35D3Q5M8T2 416 aa8.09□□□□□ -1.11
SCFD1-220ENST00000556486 LCN1P1Q5VSP4 162 aa8.09□□□□□ -1.11
SCFD1-220ENST00000556486 TRPM8Q7Z2W7 1104 aa8.09□□□□□ -1.11
SCFD1-220ENST00000556486 CPLX4Q7Z7G2 160 aa8.09□□□□□ -1.11
SCFD1-220ENST00000556486 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.09□□□□□ -1.11
SCFD1-220ENST00000556486 C11orf42Q8N5U0 333 aa8.09□□□□□ -1.11
SCFD1-220ENST00000556486 OR5A2Q8NGI9 324 aa8.09□□□□□ -1.11
SCFD1-220ENST00000556486 OR2T6Q8NHC8 308 aa8.09□□□□□ -1.11
SCFD1-220ENST00000556486 H1FXQ92522 213 aaKnown RBP8.09□□□□□ -1.11
SCFD1-220ENST00000556486 FEVQ99581 238 aa8.09□□□□□ -1.11
SCFD1-220ENST00000556486 SSX3Q99909 188 aa8.09□□□□□ -1.11
SCFD1-220ENST00000556486 SPATA25Q9BR10 227 aa8.09□□□□□ -1.11
SCFD1-220ENST00000556486 CDCA4Q9BXL8 241 aa8.09□□□□□ -1.11
SCFD1-220ENST00000556486 SLC25A32Q9H2D1 315 aa8.09□□□□□ -1.11
SCFD1-220ENST00000556486 SNTG1Q9NSN8 517 aa8.09□□□□□ -1.11
SCFD1-220ENST00000556486 DYNC2H1Q8NCM8 4307 aaKnown RBP8.09□□□□□ -1.11
SCFD1-220ENST00000556486 A0A1W2PQ09 198 aa8.08□□□□□ -1.12
SCFD1-220ENST00000556486 FAM90A8PA6NJQ4 464 aa8.08□□□□□ -1.12
SCFD1-220ENST00000556486 PRR23D1E9PI22 279 aaPredicted RBP8.08□□□□□ -1.12
SCFD1-220ENST00000556486 NOS1APO75052 506 aaPredicted RBP8.08□□□□□ -1.12
SCFD1-220ENST00000556486 E2F6O75461 281 aa8.08□□□□□ -1.12
SCFD1-220ENST00000556486 RHBDL1O75783 438 aa8.08□□□□□ -1.12
SCFD1-220ENST00000556486 HMGN1P05114 100 aa8.08□□□□□ -1.12
SCFD1-220ENST00000556486 PRR23D2P0DMB1 279 aaPredicted RBP8.08□□□□□ -1.12
SCFD1-220ENST00000556486 NDUFB7P17568 137 aa8.08□□□□□ -1.12
SCFD1-220ENST00000556486 GPM6AP51674 278 aa8.08□□□□□ -1.12
SCFD1-220ENST00000556486 GMFBP60983 142 aa8.08□□□□□ -1.12
SCFD1-220ENST00000556486 CDK5Q00535 292 aa8.08□□□□□ -1.12
SCFD1-220ENST00000556486 MS4A2Q01362 244 aa8.08□□□□□ -1.12
SCFD1-220ENST00000556486 PLBD1Q6P4A8 553 aa8.08□□□□□ -1.12
SCFD1-220ENST00000556486 DHFR2Q86XF0 187 aa8.08□□□□□ -1.12
SCFD1-220ENST00000556486 Q8N2B8 174 aa8.08□□□□□ -1.12
SCFD1-220ENST00000556486 IQCF1Q8N6M8 205 aa8.08□□□□□ -1.12
SCFD1-220ENST00000556486 ZNRF1Q8ND25 227 aa8.08□□□□□ -1.12
SCFD1-220ENST00000556486 OR51G2Q8NGK0 314 aa8.08□□□□□ -1.12
SCFD1-220ENST00000556486 ZNF671Q8TAW3 534 aa8.08□□□□□ -1.12
SCFD1-220ENST00000556486 PIFOQ8TCI5 191 aa8.08□□□□□ -1.12
SCFD1-220ENST00000556486 AQP3Q92482 292 aa8.08□□□□□ -1.12
SCFD1-220ENST00000556486 PIGCQ92535 297 aa8.08□□□□□ -1.12
SCFD1-220ENST00000556486 HIST1H2AAQ96QV6 131 aa8.08□□□□□ -1.12
SCFD1-220ENST00000556486 KRTAP17-1Q9BYP8 105 aa8.08□□□□□ -1.12
SCFD1-220ENST00000556486 KRTAP9-2Q9BYQ4 174 aa8.08□□□□□ -1.12
SCFD1-220ENST00000556486 YIPF3Q9GZM5 350 aa8.08□□□□□ -1.12
SCFD1-220ENST00000556486 FAM107BQ9H098 131 aa8.08□□□□□ -1.12
SCFD1-220ENST00000556486 OR51V1Q9H2C8 321 aa8.08□□□□□ -1.12
SCFD1-220ENST00000556486 FAM206AQ9NX38 181 aa8.08□□□□□ -1.12
SCFD1-220ENST00000556486 KLHDC2Q9Y2U9 406 aa8.08□□□□□ -1.12
SCFD1-220ENST00000556486 SACSQ9NZJ4 4579 aa8.08□□□□□ -1.12
SCFD1-220ENST00000556486 UBE2QL1A1L167 161 aa8.07□□□□□ -1.12
SCFD1-220ENST00000556486 FAM90A18PA6NE21 464 aa8.07□□□□□ -1.12
SCFD1-220ENST00000556486 FAM90A16PA6NEW6 464 aa8.07□□□□□ -1.12
SCFD1-220ENST00000556486 FAM90A9PA6NNJ1 464 aa8.07□□□□□ -1.12
SCFD1-220ENST00000556486 FAM90A5PA8MXJ8 464 aa8.07□□□□□ -1.12
SCFD1-220ENST00000556486 H0YAE9 185 aa8.07□□□□□ -1.12
SCFD1-220ENST00000556486 H3BN98 237 aa8.07□□□□□ -1.12
SCFD1-220ENST00000556486 SELENOFO60613 162 aa8.07□□□□□ -1.12
SCFD1-220ENST00000556486 ZNF254O75437 659 aa8.07□□□□□ -1.12
SCFD1-220ENST00000556486 FAM90A15PP0C7V4 464 aa8.07□□□□□ -1.12
SCFD1-220ENST00000556486 FAM90A14PP0C7W9 464 aa8.07□□□□□ -1.12
SCFD1-220ENST00000556486 PGA5P0DJD9 388 aa8.07□□□□□ -1.12
SCFD1-220ENST00000556486 BMXP51813 675 aa8.07□□□□□ -1.12
SCFD1-220ENST00000556486 SMIM21Q3B7S5 101 aa8.07□□□□□ -1.12
SCFD1-220ENST00000556486 TMEM42Q69YG0 159 aa8.07□□□□□ -1.12
SCFD1-220ENST00000556486 KCTD18Q6PI47 426 aaPredicted RBP8.07□□□□□ -1.12
SCFD1-220ENST00000556486 Q6ZSR3 168 aa8.07□□□□□ -1.12
SCFD1-220ENST00000556486 KCTD8Q6ZWB6 473 aa8.07□□□□□ -1.12
SCFD1-220ENST00000556486 CALHM1Q8IU99 346 aa8.07□□□□□ -1.12
SCFD1-220ENST00000556486 ZNF561Q8N587 486 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms