RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 SDSLQ96GA7 329 aa8□□□□□ -1.13
SRP54-210ENST00000556380 CNBD2Q96M20 576 aa8□□□□□ -1.13
SRP54-210ENST00000556380 OPALINQ96PE5 141 aa8□□□□□ -1.13
SRP54-210ENST00000556380 GAFA1Q96PS6 74 aa8□□□□□ -1.13
SRP54-210ENST00000556380 OR5M11Q96RB7 305 aa8□□□□□ -1.13
SRP54-210ENST00000556380 SHARPINQ9H0F6 387 aa8□□□□□ -1.13
SRP54-210ENST00000556380 SNTG1Q9NSN8 517 aa8□□□□□ -1.13
SRP54-210ENST00000556380 DHDHQ9UQ10 334 aa8□□□□□ -1.13
SRP54-210ENST00000556380 ERGIC3Q9Y282 383 aa8□□□□□ -1.13
SRP54-210ENST00000556380 MAB21L2Q9Y586 359 aa8□□□□□ -1.13
SRP54-210ENST00000556380 TRBV5-7A0A0A0MS05 114 aa7.99□□□□□ -1.13
SRP54-210ENST00000556380 IGHV2-70DA0A0C4DH43 119 aa7.99□□□□□ -1.13
SRP54-210ENST00000556380 IGKV1-12A0A0C4DH73 117 aa7.99□□□□□ -1.13
SRP54-210ENST00000556380 MYL12BO14950 172 aa7.99□□□□□ -1.13
SRP54-210ENST00000556380 SIGLEC5O15389 551 aa7.99□□□□□ -1.13
SRP54-210ENST00000556380 TMPRSS2O15393 492 aa7.99□□□□□ -1.13
SRP54-210ENST00000556380 RGS10O43665 173 aa7.99□□□□□ -1.13
SRP54-210ENST00000556380 IGKV1D-12P01611 117 aa7.99□□□□□ -1.13
SRP54-210ENST00000556380 SELLP14151 372 aa7.99□□□□□ -1.13
SRP54-210ENST00000556380 IGFBP3P17936 291 aaPredicted RBP7.99□□□□□ -1.13
SRP54-210ENST00000556380 CELP19835 753 aa7.99□□□□□ -1.13
SRP54-210ENST00000556380 SOX2P48431 317 aa7.99□□□□□ -1.13
SRP54-210ENST00000556380 MTCP1P56278 107 aa7.99□□□□□ -1.13
SRP54-210ENST00000556380 SPHARQ15513 63 aa7.99□□□□□ -1.13
SRP54-210ENST00000556380 LHFPL2Q6ZUX7 228 aa7.99□□□□□ -1.13
SRP54-210ENST00000556380 SLC25A26Q70HW3 274 aa7.99□□□□□ -1.13
SRP54-210ENST00000556380 PRSS48Q7RTY5 328 aa7.99□□□□□ -1.13
SRP54-210ENST00000556380 SLC36A1Q7Z2H8 476 aa7.99□□□□□ -1.13
SRP54-210ENST00000556380 CD177Q8N6Q3 437 aa7.99□□□□□ -1.13
SRP54-210ENST00000556380 LY6G5BQ8NDX9 201 aa7.99□□□□□ -1.13
SRP54-210ENST00000556380 OR51A2Q8NGJ7 313 aa7.99□□□□□ -1.13
SRP54-210ENST00000556380 TMEM106AQ96A25 262 aa7.99□□□□□ -1.13
SRP54-210ENST00000556380 TMIGD2Q96BF3 282 aa7.99□□□□□ -1.13
SRP54-210ENST00000556380 MND1Q9BWT6 205 aa7.99□□□□□ -1.13
SRP54-210ENST00000556380 Q9H521 79 aa7.99□□□□□ -1.13
SRP54-210ENST00000556380 C7orf69Q9H7B7 122 aa7.99□□□□□ -1.13
SRP54-210ENST00000556380 SEBOXQ9HB31 216 aaPredicted RBP7.99□□□□□ -1.13
SRP54-210ENST00000556380 OR5V1Q9UGF6 321 aa7.99□□□□□ -1.13
SRP54-210ENST00000556380 POLDIP2Q9Y2S7 368 aa7.99□□□□□ -1.13
SRP54-210ENST00000556380 RFPL4AA6NLU0 287 aa7.98□□□□□ -1.13
SRP54-210ENST00000556380 RFPL4AL1F8VTS6 287 aa7.98□□□□□ -1.13
SRP54-210ENST00000556380 PIN1P1O15428 100 aa7.98□□□□□ -1.13
SRP54-210ENST00000556380 SULT1B1O43704 296 aa7.98□□□□□ -1.13
SRP54-210ENST00000556380 NXPH2O95156 264 aa7.98□□□□□ -1.13
SRP54-210ENST00000556380 ECDO95905 644 aaPredicted RBP7.98□□□□□ -1.13
SRP54-210ENST00000556380 ALDOBP05062 364 aa7.98□□□□□ -1.13
SRP54-210ENST00000556380 OCM2P0CE71 109 aa7.98□□□□□ -1.13
SRP54-210ENST00000556380 PPIAL4GP0DN37 164 aa7.98□□□□□ -1.13
SRP54-210ENST00000556380 PRDX2P32119 198 aa7.98□□□□□ -1.13
SRP54-210ENST00000556380 NPBWR2P48146 333 aa7.98□□□□□ -1.13
SRP54-210ENST00000556380 ZP1P60852 638 aa7.98□□□□□ -1.13
SRP54-210ENST00000556380 TPBGQ13641 420 aa7.98□□□□□ -1.13
SRP54-210ENST00000556380 KISS1Q15726 138 aa7.98□□□□□ -1.13
SRP54-210ENST00000556380 SMIM21Q3B7S5 101 aa7.98□□□□□ -1.13
SRP54-210ENST00000556380 KRTAP21-3Q3LHN1 58 aa7.98□□□□□ -1.13
SRP54-210ENST00000556380 Q499Y3 187 aa7.98□□□□□ -1.13
SRP54-210ENST00000556380 CD276Q5ZPR3 534 aa7.98□□□□□ -1.13
SRP54-210ENST00000556380 UNQ9370/PRO34162Q6UXP9 181 aa7.98□□□□□ -1.13
SRP54-210ENST00000556380 ASCL4Q6XD76 172 aa7.98□□□□□ -1.13
SRP54-210ENST00000556380 BTN2A1Q7KYR7 527 aa7.98□□□□□ -1.13
SRP54-210ENST00000556380 C1QL2Q7Z5L3 287 aa7.98□□□□□ -1.13
SRP54-210ENST00000556380 ZSCAN4Q8NAM6 433 aaPredicted RBP7.98□□□□□ -1.13
SRP54-210ENST00000556380 TSEN15Q8WW01 171 aaKnown RBP7.98□□□□□ -1.13
SRP54-210ENST00000556380 SLAMF9Q96A28 289 aa7.98□□□□□ -1.13
SRP54-210ENST00000556380 MED30Q96HR3 178 aa7.98□□□□□ -1.13
SRP54-210ENST00000556380 CEP19Q96LK0 163 aa7.98□□□□□ -1.13
SRP54-210ENST00000556380 SPACA5Q96QH8 159 aa7.98□□□□□ -1.13
SRP54-210ENST00000556380 NUDT16L1Q9BRJ7 211 aaKnown RBP7.98□□□□□ -1.13
SRP54-210ENST00000556380 ISYNA1Q9NPH2 558 aa7.98□□□□□ -1.13
SRP54-210ENST00000556380 TAS2R4Q9NYW5 299 aa7.98□□□□□ -1.13
SRP54-210ENST00000556380 DNAJB11Q9UBS4 358 aa7.98□□□□□ -1.13
SRP54-210ENST00000556380 BLOC1S6Q9UL45 172 aa7.98□□□□□ -1.13
SRP54-210ENST00000556380 TRAV8-7A0A075B6U6 113 aa7.97□□□□□ -1.13
SRP54-210ENST00000556380 PNMA8CA0A1B0GUJ8 204 aa7.97□□□□□ -1.13
SRP54-210ENST00000556380 ZNF879B4DU55 563 aa7.97□□□□□ -1.13
SRP54-210ENST00000556380 SPRY1O43609 319 aaPredicted RBP7.97□□□□□ -1.13
SRP54-210ENST00000556380 NDUFB3O43676 98 aa7.97□□□□□ -1.13
SRP54-210ENST00000556380 ANGPTL7O43827 346 aa7.97□□□□□ -1.13
SRP54-210ENST00000556380 KDM4BO94953 1096 aa7.97□□□□□ -1.13
SRP54-210ENST00000556380 PLATP00750 562 aa7.97□□□□□ -1.13
SRP54-210ENST00000556380 KNG1P01042 644 aa7.97□□□□□ -1.13
SRP54-210ENST00000556380 CD2P06729 351 aa7.97□□□□□ -1.13
SRP54-210ENST00000556380 LIPFP07098 398 aa7.97□□□□□ -1.13
SRP54-210ENST00000556380 SRD5A1P18405 259 aa7.97□□□□□ -1.13
SRP54-210ENST00000556380 ADRA2CP18825 462 aa7.97□□□□□ -1.13
SRP54-210ENST00000556380 RAB3AP20336 220 aa7.97□□□□□ -1.13
SRP54-210ENST00000556380 BCL3P20749 454 aa7.97□□□□□ -1.13
SRP54-210ENST00000556380 HNF1AP20823 631 aa7.97□□□□□ -1.13
SRP54-210ENST00000556380 MAP2K4P45985 399 aa7.97□□□□□ -1.13
SRP54-210ENST00000556380 GP2P55259 537 aaKnown RBP7.97□□□□□ -1.13
SRP54-210ENST00000556380 CAV3P56539 151 aa7.97□□□□□ -1.13
SRP54-210ENST00000556380 IL13RA1P78552 427 aa7.97□□□□□ -1.13
SRP54-210ENST00000556380 IKZF1Q13422 519 aa7.97□□□□□ -1.13
SRP54-210ENST00000556380 GPR50Q13585 617 aa7.97□□□□□ -1.13
SRP54-210ENST00000556380 KLF17Q5JT82 389 aaPredicted RBP7.97□□□□□ -1.13
SRP54-210ENST00000556380 LYPD6Q86Y78 171 aa7.97□□□□□ -1.13
SRP54-210ENST00000556380 MKXQ8IYA7 352 aa7.97□□□□□ -1.13
SRP54-210ENST00000556380 SAXO1Q8IYX7 474 aa7.97□□□□□ -1.13
SRP54-210ENST00000556380 BATF2Q8N1L9 274 aa7.97□□□□□ -1.13
SRP54-210ENST00000556380 ZNRF1Q8ND25 227 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms