RNA–Protein interactions for RNA: ENST00000556378.5

NGDN-208, Transcript of neuroguidin, human

TSL 2

Gene NGDN, Length 803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NGDN-208	ENST00000556378	STUM	Q69YW2	141 aa		14.01	□□□□□ -0.17
NGDN-208	ENST00000556378	CRIP3	Q6Q6R5	217 aa		14.01	□□□□□ -0.17
NGDN-208	ENST00000556378	SLC36A1	Q7Z2H8	476 aa		14.01	□□□□□ -0.17
NGDN-208	ENST00000556378	CDH26	Q8IXH8	852 aa		14.01	□□□□□ -0.17
NGDN-208	ENST00000556378	NKAIN3	Q8N8D7	197 aa		14.01	□□□□□ -0.17
NGDN-208	ENST00000556378	ANGPTL6	Q8NI99	470 aa		14.01	□□□□□ -0.17
NGDN-208	ENST00000556378	CCL13	Q99616	98 aa		14.01	□□□□□ -0.17
NGDN-208	ENST00000556378	PPIL3	Q9H2H8	161 aa	Known RBP	14.01	□□□□□ -0.17
NGDN-208	ENST00000556378	HES4	Q9HCC6	221 aa		14.01	□□□□□ -0.17
NGDN-208	ENST00000556378	EXOSC4	Q9NPD3	245 aa	Known RBP	14.01	□□□□□ -0.17
NGDN-208	ENST00000556378	ING4	Q9UNL4	249 aa		14.01	□□□□□ -0.17
NGDN-208	ENST00000556378	IGKV1-12	A0A0C4DH73	117 aa		14	□□□□□ -0.17
NGDN-208	ENST00000556378	TRIM64C	A6NLI5	447 aa		14	□□□□□ -0.17
NGDN-208	ENST00000556378		F8VVB4	439 aa		14	□□□□□ -0.17
NGDN-208	ENST00000556378		F8VWA3	439 aa		14	□□□□□ -0.17
NGDN-208	ENST00000556378	CD5L	O43866	347 aa		14	□□□□□ -0.17
NGDN-208	ENST00000556378	FOXH1	O75593	365 aa		14	□□□□□ -0.17
NGDN-208	ENST00000556378	KNG1	P01042	644 aa		14	□□□□□ -0.17
NGDN-208	ENST00000556378	IGKV1D-12	P01611	117 aa		14	□□□□□ -0.17
NGDN-208	ENST00000556378	ZNF16	P17020	682 aa	Predicted RBP	14	□□□□□ -0.17
NGDN-208	ENST00000556378	PRKACA	P17612	351 aa		14	□□□□□ -0.17
NGDN-208	ENST00000556378	GAL	P22466	123 aa		14	□□□□□ -0.17
NGDN-208	ENST00000556378	PTGFR	P43088	359 aa		14	□□□□□ -0.17
NGDN-208	ENST00000556378	OR3A4P	P47883	348 aa		14	□□□□□ -0.17
NGDN-208	ENST00000556378	LCN2	P80188	198 aa		14	□□□□□ -0.17
NGDN-208	ENST00000556378	RSU1	Q15404	277 aa		14	□□□□□ -0.17
NGDN-208	ENST00000556378	ATPAF1	Q5TC12	328 aa	Predicted RBP	14	□□□□□ -0.17
NGDN-208	ENST00000556378	GLT8D1	Q68CQ7	371 aa		14	□□□□□ -0.17
NGDN-208	ENST00000556378	CD200R1L	Q6Q8B3	271 aa		14	□□□□□ -0.17
NGDN-208	ENST00000556378	FAM58A	Q8N1B3	248 aa		14	□□□□□ -0.17
NGDN-208	ENST00000556378	PXT1	Q8NFP0	134 aa		14	□□□□□ -0.17
NGDN-208	ENST00000556378	MED30	Q96HR3	178 aa		14	□□□□□ -0.17
NGDN-208	ENST00000556378	NKX3-1	Q99801	234 aa	Predicted RBP	14	□□□□□ -0.17
NGDN-208	ENST00000556378	SSBP3	Q9BWW4	388 aa	Predicted RBP	14	□□□□□ -0.17
NGDN-208	ENST00000556378	RHOF	Q9HBH0	211 aa		14	□□□□□ -0.17
NGDN-208	ENST00000556378	RBFOX1	Q9NWB1	397 aa	Known RBP	14	□□□□□ -0.17
NGDN-208	ENST00000556378	KAAG1	Q9UBP8	84 aa		14	□□□□□ -0.17
NGDN-208	ENST00000556378	CLN8	Q9UBY8	286 aa		14	□□□□□ -0.17
NGDN-208	ENST00000556378	OR14J1	Q9UGF5	321 aa		14	□□□□□ -0.17
NGDN-208	ENST00000556378	STUB1	Q9UNE7	303 aa		14	□□□□□ -0.17
NGDN-208	ENST00000556378	SSR3	Q9UNL2	185 aa		14	□□□□□ -0.17
NGDN-208	ENST00000556378	IGKV1D-17	A0A075B6S4	117 aa		13.99	□□□□□ -0.17
NGDN-208	ENST00000556378	RFPL4A	A6NLU0	287 aa		13.99	□□□□□ -0.17
NGDN-208	ENST00000556378	RFPL4AL1	F8VTS6	287 aa		13.99	□□□□□ -0.17
NGDN-208	ENST00000556378	KDM4B	O94953	1096 aa		13.99	□□□□□ -0.17
NGDN-208	ENST00000556378	MSMB	P08118	114 aa		13.99	□□□□□ -0.17
NGDN-208	ENST00000556378	CD36	P16671	472 aa		13.99	□□□□□ -0.17
NGDN-208	ENST00000556378	JUNB	P17275	347 aa	Predicted RBP	13.99	□□□□□ -0.17
NGDN-208	ENST00000556378	NPY4R	P50391	375 aa		13.99	□□□□□ -0.17
NGDN-208	ENST00000556378	SEC61A1	P61619	476 aa	Known RBP	13.99	□□□□□ -0.17
NGDN-208	ENST00000556378	IL13RA1	P78552	427 aa		13.99	□□□□□ -0.17
NGDN-208	ENST00000556378	ZNF788	Q6ZQV5	615 aa		13.99	□□□□□ -0.17
NGDN-208	ENST00000556378	LRRTM1	Q86UE6	522 aa		13.99	□□□□□ -0.17
NGDN-208	ENST00000556378	GLCCI1	Q86VQ1	547 aa		13.99	□□□□□ -0.17
NGDN-208	ENST00000556378	FOXRED1	Q96CU9	486 aa	Predicted RBP	13.99	□□□□□ -0.17
NGDN-208	ENST00000556378	METTL9	Q9H1A3	318 aa		13.99	□□□□□ -0.17
NGDN-208	ENST00000556378	GSX1	Q9H4S2	264 aa	Predicted RBP	13.99	□□□□□ -0.17
NGDN-208	ENST00000556378	GLS2	Q9UI32	602 aa		13.99	□□□□□ -0.17
NGDN-208	ENST00000556378	GSTK1	Q9Y2Q3	226 aa		13.99	□□□□□ -0.17
NGDN-208	ENST00000556378	TRAV20	A0A0B4J274	112 aa		13.98	□□□□□ -0.17
NGDN-208	ENST00000556378	DVL1	O14640	695 aa		13.98	□□□□□ -0.17
NGDN-208	ENST00000556378	PHF1	O43189	567 aa	Predicted RBP	13.98	□□□□□ -0.17
NGDN-208	ENST00000556378	NDUFB3	O43676	98 aa		13.98	□□□□□ -0.17
NGDN-208	ENST00000556378	CDRT1	O95170	752 aa		13.98	□□□□□ -0.17
NGDN-208	ENST00000556378	SFTPB	P07988	381 aa		13.98	□□□□□ -0.17
NGDN-208	ENST00000556378	CALCB	P10092	127 aa		13.98	□□□□□ -0.17
NGDN-208	ENST00000556378	ADRA2C	P18825	462 aa		13.98	□□□□□ -0.17
NGDN-208	ENST00000556378	MYL9	P24844	172 aa		13.98	□□□□□ -0.17
NGDN-208	ENST00000556378	PRDX2	P32119	198 aa		13.98	□□□□□ -0.17
NGDN-208	ENST00000556378	BMX	P51813	675 aa		13.98	□□□□□ -0.17
NGDN-208	ENST00000556378	SNU13	P55769	128 aa	Known RBP	13.98	□□□□□ -0.17
NGDN-208	ENST00000556378	KRTAP1-1	Q07627	177 aa		13.98	□□□□□ -0.17
NGDN-208	ENST00000556378	WDR25	Q64LD2	544 aa	Predicted RBP	13.98	□□□□□ -0.17
NGDN-208	ENST00000556378	C22orf42	Q6IC83	251 aa		13.98	□□□□□ -0.17
NGDN-208	ENST00000556378	FAM166A	Q6J272	317 aa		13.98	□□□□□ -0.17
NGDN-208	ENST00000556378	C1QL2	Q7Z5L3	287 aa		13.98	□□□□□ -0.17
NGDN-208	ENST00000556378	FAM216B	Q8N7L0	139 aa		13.98	□□□□□ -0.17
NGDN-208	ENST00000556378	GAFA1	Q96PS6	74 aa		13.98	□□□□□ -0.17
NGDN-208	ENST00000556378	UQCC2	Q9BRT2	126 aa		13.98	□□□□□ -0.17
NGDN-208	ENST00000556378	MRPS26	Q9BYN8	205 aa	Known RBP	13.98	□□□□□ -0.17
NGDN-208	ENST00000556378	CNTD2	Q9H8S5	307 aa		13.98	□□□□□ -0.17
NGDN-208	ENST00000556378	HMG20A	Q9NP66	347 aa		13.98	□□□□□ -0.17
NGDN-208	ENST00000556378	YAE1D1	Q9NRH1	226 aa		13.98	□□□□□ -0.17
NGDN-208	ENST00000556378	PCDHB16	Q9NRJ7	776 aa		13.98	□□□□□ -0.17
NGDN-208	ENST00000556378	CTSZ	Q9UBR2	303 aa		13.98	□□□□□ -0.17
NGDN-208	ENST00000556378	OR5V1	Q9UGF6	321 aa		13.98	□□□□□ -0.17
NGDN-208	ENST00000556378	MRPS28	Q9Y2Q9	187 aa	Known RBP	13.98	□□□□□ -0.17
NGDN-208	ENST00000556378	SIGLEC5	O15389	551 aa		13.97	□□□□□ -0.17
NGDN-208	ENST00000556378	HTR3B	O95264	441 aa		13.97	□□□□□ -0.17
NGDN-208	ENST00000556378	CSTB	P04080	98 aa	Known RBP	13.97	□□□□□ -0.17
NGDN-208	ENST00000556378	TFF1	P04155	84 aa		13.97	□□□□□ -0.17
NGDN-208	ENST00000556378	SMIM18	P0DKX4	95 aa		13.97	□□□□□ -0.17
NGDN-208	ENST00000556378	AMY2B	P19961	511 aa		13.97	□□□□□ -0.17
NGDN-208	ENST00000556378	ZFP36	P26651	326 aa	Known RBP	13.97	□□□□□ -0.17
NGDN-208	ENST00000556378	FGF9	P31371	208 aa	Predicted RBP	13.97	□□□□□ -0.17
NGDN-208	ENST00000556378	MTNR1B	P49286	362 aa		13.97	□□□□□ -0.17
NGDN-208	ENST00000556378	CEBPD	P49716	269 aa	Predicted RBP	13.97	□□□□□ -0.17
NGDN-208	ENST00000556378	CAPZA1	P52907	286 aa		13.97	□□□□□ -0.17
NGDN-208	ENST00000556378	IKZF1	Q13422	519 aa		13.97	□□□□□ -0.17
NGDN-208	ENST00000556378	LRRC10	Q5BKY1	277 aa		13.97	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms