RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 HIST1H1DP16402 221 aaKnown RBP3.84□□□□□ -1.79
ATXN3-241ENST00000556374 HLA-GP17693 338 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 CPT2P23786 658 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 FKBP2P26885 142 aaKnown RBP3.84□□□□□ -1.79
ATXN3-241ENST00000556374 PPIFP30405 207 aaKnown RBP3.84□□□□□ -1.79
ATXN3-241ENST00000556374 THBS4P35443 961 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 GABRA4P48169 554 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 CSNK1EP49674 416 aaKnown RBP3.84□□□□□ -1.79
ATXN3-241ENST00000556374 ZNF84P51523 738 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 AKR1D1P51857 326 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 CLDN6P56747 220 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 ACY1Q03154 408 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 FMODQ06828 376 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 LY6DQ14210 128 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 PPA1Q15181 289 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 SURF2Q15527 256 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-241ENST00000556374 SLC9A3R2Q15599 337 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 HMGN3Q15651 99 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 INPP5JQ15735 1006 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-241ENST00000556374 CHRFAM7AQ494W8 412 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 TMEM128Q5BJH2 165 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 BEX5Q5H9J7 111 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 LY6G6FQ5SQ64 297 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 THEM4Q5T1C6 240 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 OR52W1Q6IF63 320 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 OR10K2Q6IF99 312 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 PRSS54Q6PEW0 395 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 OPN5Q6U736 354 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 GLIPR1L1Q6UWM5 242 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 UNQ6126/PRO20091Q6UXV3 157 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 MOB3CQ70IA8 216 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 SYT13Q7L8C5 426 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 RABEPKQ7Z6M1 372 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 NAA40Q86UY6 237 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 ANGPTL5Q86XS5 388 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 SFTPA2Q8IWL1 248 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 BAP18Q8IXM2 172 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 OR4S1Q8NGB4 309 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 OR52N4Q8NGI2 321 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 OR4D6Q8NGJ1 314 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 OR52H1Q8NGJ2 320 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 OR51T1Q8NGJ9 327 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 OR13C8Q8NGS7 320 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 NUBPLQ8TB37 319 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 FNDC9Q8TBE3 224 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 MARCH1Q8TCQ1 289 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 ST7LQ8TDW4 575 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-241ENST00000556374 PIK3IP1Q96FE7 263 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 FAM71F1Q96KD3 344 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-241ENST00000556374 ZNF75AQ96N20 296 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 OR5B2Q96R09 309 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 C1QTNF6Q9BXI9 259 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 SELENOIQ9C0D9 397 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 OR11A1Q9GZK7 315 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 VN1R1Q9GZP7 353 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 MS4A7Q9GZW8 240 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-241ENST00000556374 CHST6Q9GZX3 395 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 SAV1Q9H4B6 383 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-241ENST00000556374 PTGES2Q9H7Z7 377 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 ELL3Q9HB65 397 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-241ENST00000556374 FSCN3Q9NQT6 498 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 BIN3Q9NQY0 253 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 ZFP57Q9NU63 452 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 ZNF701Q9NV72 531 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-241ENST00000556374 FAM206AQ9NX38 181 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 EHFQ9NZC4 300 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 DNAJB11Q9UBS4 358 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 ZNF629Q9UEG4 869 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-241ENST00000556374 PURGQ9UJV8 347 aaKnown RBP3.84□□□□□ -1.79
ATXN3-241ENST00000556374 FBXO9Q9UK97 447 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-241ENST00000556374 VDAC3Q9Y277 283 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 RPH3AQ9Y2J0 694 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-241ENST00000556374 ZNF175Q9Y473 711 aa3.84□□□□□ -1.79
ATXN3-241ENST00000556374 MRPS18BQ9Y676 258 aaKnown RBP3.84□□□□□ -1.79
ATXN3-241ENST00000556374 CACNA1DQ01668 2161 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 KNTC1P50748 2209 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 POLQO75417 2590 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 IGHV1OR21-1A0A087WYE8 117 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 A0A087WZY1 265 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 IGHV1OR15-9A0A0B4J2B8 117 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 TEX13DA0A0J9YY54 714 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-241ENST00000556374 TMEM218A2RU14 115 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 RNF222A6NCQ9 220 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 PRSS29PA6NIE9 313 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 LIPT2A6NK58 231 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 GJE1A6NN92 205 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 SERPINE3A8MV23 424 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 TMEM14DPA8MWL7 114 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 NPIPA2E9PIF3 369 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 NPIPA3F8WFD2 350 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 H7C1Q1 480 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 ABCD4O14678 606 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 TP53I11O14683 189 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 NUPL2O15504 423 aaKnown RBP3.83□□□□□ -1.8
ATXN3-241ENST00000556374 RRP8O43159 456 aaKnown RBP3.83□□□□□ -1.8
ATXN3-241ENST00000556374 MED6O75586 246 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 ZFAND5O76080 213 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 MPZL1O95297 269 aa3.83□□□□□ -1.8
ATXN3-241ENST00000556374 FARS2O95363 451 aaKnown RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms