RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 DBTP11182 482 aaKnown RBP9.67□□□□□ -0.86
VRK1-204ENST00000555351 OR12D2P58182 307 aa9.67□□□□□ -0.86
VRK1-204ENST00000555351 ERVFRD-1P60508 538 aa9.67□□□□□ -0.86
VRK1-204ENST00000555351 RELBQ01201 579 aa9.67□□□□□ -0.86
VRK1-204ENST00000555351 ZNF91Q05481 1191 aa9.67□□□□□ -0.86
VRK1-204ENST00000555351 RAB40BQ12829 278 aa9.67□□□□□ -0.86
VRK1-204ENST00000555351 ODF4Q2M2E3 257 aa9.67□□□□□ -0.86
VRK1-204ENST00000555351 ZIK1Q3SY52 487 aaPredicted RBP9.67□□□□□ -0.86
VRK1-204ENST00000555351 SPIN3Q5JUX0 258 aa9.67□□□□□ -0.86
VRK1-204ENST00000555351 LPCAT4Q643R3 524 aa9.67□□□□□ -0.86
VRK1-204ENST00000555351 HCP5Q6MZN7 132 aa9.67□□□□□ -0.86
VRK1-204ENST00000555351 LHFPL2Q6ZUX7 228 aa9.67□□□□□ -0.86
VRK1-204ENST00000555351 PDZD9Q8IXQ8 264 aa9.67□□□□□ -0.86
VRK1-204ENST00000555351 FAM185AQ8N0U4 392 aa9.67□□□□□ -0.86
VRK1-204ENST00000555351 C11orf42Q8N5U0 333 aa9.67□□□□□ -0.86
VRK1-204ENST00000555351 ZSCAN4Q8NAM6 433 aaPredicted RBP9.67□□□□□ -0.86
VRK1-204ENST00000555351 TRMT10AQ8TBZ6 339 aaKnown RBP9.67□□□□□ -0.86
VRK1-204ENST00000555351 WFDC12Q8WWY7 111 aa9.67□□□□□ -0.86
VRK1-204ENST00000555351 LGALS12Q96DT0 336 aa9.67□□□□□ -0.86
VRK1-204ENST00000555351 PELI1Q96FA3 418 aa9.67□□□□□ -0.86
VRK1-204ENST00000555351 JAM3Q9BX67 310 aa9.67□□□□□ -0.86
VRK1-204ENST00000555351 MEGF9Q9H1U4 602 aa9.67□□□□□ -0.86
VRK1-204ENST00000555351 C16orf95Q9H693 158 aa9.67□□□□□ -0.86
VRK1-204ENST00000555351 ELL3Q9HB65 397 aaPredicted RBP9.67□□□□□ -0.86
VRK1-204ENST00000555351 TRBV2A0A0J9YWF9 115 aa9.66□□□□□ -0.86
VRK1-204ENST00000555351 OR4C45A6NMZ5 311 aa9.66□□□□□ -0.86
VRK1-204ENST00000555351 C17orf98A8MV24 154 aa9.66□□□□□ -0.86
VRK1-204ENST00000555351 TSPAN9O75954 239 aa9.66□□□□□ -0.86
VRK1-204ENST00000555351 ZNF20P17024 532 aa9.66□□□□□ -0.86
VRK1-204ENST00000555351 ATF1P18846 271 aa9.66□□□□□ -0.86
VRK1-204ENST00000555351 TGFBR2P37173 567 aa9.66□□□□□ -0.86
VRK1-204ENST00000555351 NANOS3P60323 173 aaKnown RBP9.66□□□□□ -0.86
VRK1-204ENST00000555351 KLRD1Q13241 179 aa9.66□□□□□ -0.86
VRK1-204ENST00000555351 ALKBH1Q13686 389 aaKnown RBP9.66□□□□□ -0.86
VRK1-204ENST00000555351 ZNF146Q15072 292 aa9.66□□□□□ -0.86
VRK1-204ENST00000555351 TAF9Q16594 264 aa9.66□□□□□ -0.86
VRK1-204ENST00000555351 KLHL22Q53GT1 634 aa9.66□□□□□ -0.86
VRK1-204ENST00000555351 SLC25A26Q70HW3 274 aa9.66□□□□□ -0.86
VRK1-204ENST00000555351 SAXO1Q8IYX7 474 aa9.66□□□□□ -0.86
VRK1-204ENST00000555351 OR8H2Q8N162 312 aa9.66□□□□□ -0.86
VRK1-204ENST00000555351 DTX3Q8N9I9 347 aa9.66□□□□□ -0.86
VRK1-204ENST00000555351 ADAT3Q96EY9 351 aaPredicted RBP9.66□□□□□ -0.86
VRK1-204ENST00000555351 C4orf36Q96KX1 117 aa9.66□□□□□ -0.86
VRK1-204ENST00000555351 SNX22Q96L94 193 aa9.66□□□□□ -0.86
VRK1-204ENST00000555351 SLC29A1Q99808 456 aa9.66□□□□□ -0.86
VRK1-204ENST00000555351 C8orf4Q9NR00 106 aa9.66□□□□□ -0.86
VRK1-204ENST00000555351 FAM118AQ9NWS6 357 aa9.66□□□□□ -0.86
VRK1-204ENST00000555351 OR14J1Q9UGF5 321 aa9.66□□□□□ -0.86
VRK1-204ENST00000555351 RPL36Q9Y3U8 105 aaKnown RBP9.66□□□□□ -0.86
VRK1-204ENST00000555351 IGKV1-9A0A0C4DH69 117 aa9.65□□□□□ -0.86
VRK1-204ENST00000555351 TMEM212A6NML5 194 aa9.65□□□□□ -0.86
VRK1-204ENST00000555351 J3QLW9 94 aa9.65□□□□□ -0.86
VRK1-204ENST00000555351 CLPXO76031 633 aa9.65□□□□□ -0.86
VRK1-204ENST00000555351 CCDC159P0C7I6 412 aa9.65□□□□□ -0.86
VRK1-204ENST00000555351 ZNF19P17023 458 aa9.65□□□□□ -0.86
VRK1-204ENST00000555351 OMGP23515 440 aa9.65□□□□□ -0.86
VRK1-204ENST00000555351 AZGP1P25311 298 aaKnown RBP9.65□□□□□ -0.86
VRK1-204ENST00000555351 DLX6P56179 175 aa9.65□□□□□ -0.86
VRK1-204ENST00000555351 MTCP1P56278 107 aa9.65□□□□□ -0.86
VRK1-204ENST00000555351 COL10A1Q03692 680 aa9.65□□□□□ -0.86
VRK1-204ENST00000555351 PDZK1IP1Q13113 114 aa9.65□□□□□ -0.86
VRK1-204ENST00000555351 ZSCAN26Q16670 478 aa9.65□□□□□ -0.86
VRK1-204ENST00000555351 LIAT1Q6ZQX7 453 aa9.65□□□□□ -0.86
VRK1-204ENST00000555351 C17orf107Q6ZR85 190 aa9.65□□□□□ -0.86
VRK1-204ENST00000555351 GDPD3Q7L5L3 318 aa9.65□□□□□ -0.86
VRK1-204ENST00000555351 RDH10Q8IZV5 341 aa9.65□□□□□ -0.86
VRK1-204ENST00000555351 FAM58AQ8N1B3 248 aa9.65□□□□□ -0.86
VRK1-204ENST00000555351 LINC01006Q8NI28 216 aa9.65□□□□□ -0.86
VRK1-204ENST00000555351 SLAMF9Q96A28 289 aa9.65□□□□□ -0.86
VRK1-204ENST00000555351 FGGYQ96C11 551 aa9.65□□□□□ -0.86
VRK1-204ENST00000555351 OPALINQ96PE5 141 aa9.65□□□□□ -0.86
VRK1-204ENST00000555351 CITED1Q99966 193 aa9.65□□□□□ -0.86
VRK1-204ENST00000555351 ZNF649Q9BS31 505 aa9.65□□□□□ -0.86
VRK1-204ENST00000555351 ALG8Q9BVK2 526 aa9.65□□□□□ -0.86
VRK1-204ENST00000555351 TNFRSF19Q9NS68 423 aa9.65□□□□□ -0.86
VRK1-204ENST00000555351 ERVK13-1Q9NX77 482 aa9.65□□□□□ -0.86
VRK1-204ENST00000555351 GLS2Q9UI32 602 aa9.65□□□□□ -0.86
VRK1-204ENST00000555351 hADV38S2A0JD32 116 aa9.64□□□□□ -0.87
VRK1-204ENST00000555351 FAM90A8PA6NJQ4 464 aa9.64□□□□□ -0.87
VRK1-204ENST00000555351 F8VVB4 439 aa9.64□□□□□ -0.87
VRK1-204ENST00000555351 F8VWA3 439 aa9.64□□□□□ -0.87
VRK1-204ENST00000555351 ANGPTL7O43827 346 aa9.64□□□□□ -0.87
VRK1-204ENST00000555351 ZNF728P0DKX0 622 aa9.64□□□□□ -0.87
VRK1-204ENST00000555351 PEX2P28328 305 aa9.64□□□□□ -0.87
VRK1-204ENST00000555351 ERP29P30040 261 aaKnown RBP9.64□□□□□ -0.87
VRK1-204ENST00000555351 CEBPDP49716 269 aaPredicted RBP9.64□□□□□ -0.87
VRK1-204ENST00000555351 PROK1P58294 105 aa9.64□□□□□ -0.87
VRK1-204ENST00000555351 DHRS7BQ6IAN0 325 aaPredicted RBP9.64□□□□□ -0.87
VRK1-204ENST00000555351 C11orf88Q6PI97 169 aa9.64□□□□□ -0.87
VRK1-204ENST00000555351 SERPINA12Q8IW75 414 aa9.64□□□□□ -0.87
VRK1-204ENST00000555351 PARP16Q8N5Y8 322 aa9.64□□□□□ -0.87
VRK1-204ENST00000555351 ZNF676Q8N7Q3 588 aa9.64□□□□□ -0.87
VRK1-204ENST00000555351 ASCC1Q8N9N2 400 aaKnown RBP9.64□□□□□ -0.87
VRK1-204ENST00000555351 ZNF555Q8NEP9 628 aa9.64□□□□□ -0.87
VRK1-204ENST00000555351 OR11H6Q8NGC7 330 aa9.64□□□□□ -0.87
VRK1-204ENST00000555351 OR5D14Q8NGL3 314 aa9.64□□□□□ -0.87
VRK1-204ENST00000555351 OR13C3Q8NGS6 347 aa9.64□□□□□ -0.87
VRK1-204ENST00000555351 PPP1R35Q8TAP8 253 aa9.64□□□□□ -0.87
VRK1-204ENST00000555351 EMG1Q92979 244 aaKnown RBP9.64□□□□□ -0.87
VRK1-204ENST00000555351 FOXRED1Q96CU9 486 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms