RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 NR2C1P13056 603 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 SELLP14151 372 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 DUSP1P28562 367 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 PTGDSP41222 190 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 MYBPHQ13203 477 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 ZNF674Q2M3X9 581 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 ZNF385CQ66K41 422 aaPredicted RBP9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 DPPA3Q6W0C5 159 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 SLC16A14Q7RTX9 510 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 SLC38A9Q8NBW4 561 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 NOXO1Q8NFA2 376 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 SEMA6DQ8NFY4 1073 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 OR51T1Q8NGJ9 327 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 OR10D4PQ8NGN7 298 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 OR2AJ1Q8NGZ0 328 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 POC1BQ8TC44 478 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 MRPL24Q96A35 216 aaKnown RBP9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 S100PBPQ96BU1 408 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 TVP23CQ96ET8 276 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 B3GAT1Q9P2W7 334 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 PADI1Q9ULC6 663 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 PUS1Q9Y606 427 aaKnown RBP eCLIP9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 COL6A3P12111 3177 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 CEP192Q8TEP8 1941 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 NSG1A0A0A6YYJ2 146 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 IGKV1D-43A0A0B4J1Z2 117 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 LOC102725191A0A1B0GVB3 256 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 H3BML4 177 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 H3BQ15 152 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 K7ESF4 209 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 SDCBPO00560 298 aaPredicted RBP9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 ST8SIA3O43173 380 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 HIST1H2BKO60814 126 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 HIST1H2BJP06899 126 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 OR13C7P0DN81 318 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 HIST1H2BOP23527 126 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 HIST1H2BBP33778 126 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 TAGLN2P37802 199 aaKnown RBP9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 GLIPR1P48060 266 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 HIST1H2BDP58876 126 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 SPCS3P61009 180 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 HIST1H2BCP62807 126 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 FOXO1Q12778 655 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 RSU1Q15404 277 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 KCNMB1Q16558 191 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 HIST2H2BEQ16778 126 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 RTN4RL2Q86UN3 420 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 DEFB123Q8N688 67 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 OR2M3Q8NG83 312 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 OR6X1Q8NH79 312 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 OR51E1Q8TCB6 317 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 HIST1H2BHQ93079 126 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 RBMXL1Q96E39 390 aaKnown RBP9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 MARS2Q96GW9 593 aaKnown RBP9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 ABHD14BQ96IU4 210 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 OXGR1Q96P68 337 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 GPER1Q99527 375 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 SPSB2Q99619 263 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 HIST1H2BNQ99877 126 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 HIST1H2BMQ99879 126 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 BANF2Q9H503 90 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 NAA60Q9H7X0 242 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 WFDC1Q9HC57 220 aa9.34□□□□□ -0.91
MTHFD1-210ENST00000555252 A0A087WZY1 265 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 IGHV5-10-1A0A0J9YXX1 117 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 TP53I11O14683 189 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 EFNA2O43921 213 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 HPNP05981 417 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 SRP19P09132 144 aaKnown RBP9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 PGA4P0DJD7 388 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 PGA3P0DJD8 388 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 UBE2KP61086 200 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 CCL7P80098 99 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 TMEM187Q14656 261 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 ZNF506Q5JVG8 444 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 FAM69BQ5VUD6 431 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 SP5Q6BEB4 398 aaPredicted RBP9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 FIP1L1Q6UN15 594 aaKnown RBP9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 OR10S1Q8NGN2 331 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 Q8WTZ3 238 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 NAT6Q93015 286 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 RAB24Q969Q5 203 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 RAB39BQ96DA2 213 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 SPACA9Q96E40 222 aaPredicted RBP9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 RCC1LQ96I51 464 aaKnown RBP9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 SYT3Q9BQG1 590 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 ZNF2Q9BSG1 426 aaPredicted RBP9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 IER2Q9BTL4 223 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 DEFB126Q9BYW3 111 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 NXT1Q9UKK6 140 aaKnown RBP9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 TP53TG5Q9Y2B4 290 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 HSD17B6O14756 317 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 HSPA12AO43301 675 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 TLX3O43711 291 aaPredicted RBP9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 PITX3O75364 302 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 TIAF1O95411 115 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 HBE1P02100 147 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 BLVRBP30043 206 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms