RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 TMEM210A6NLX4 147 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 GEMIN2O14893 280 aaKnown RBP9.07□□□□□ -0.96
TDP1-211ENST00000555178 TMEM127O75204 238 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 CSTBP04080 98 aaKnown RBP9.07□□□□□ -0.96
TDP1-211ENST00000555178 UBBP0CG47 229 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 RAB6AP20340 208 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 COL8A2P25067 703 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 TALDO1P37837 337 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 TAS2R20P59543 309 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 IFITM3Q01628 133 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 ZNF846Q147U1 533 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 BRICD5Q6PL45 260 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 OR51T1Q8NGJ9 327 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 S100ZQ8WXG8 99 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 S100A16Q96FQ6 103 aaKnown RBP9.07□□□□□ -0.96
TDP1-211ENST00000555178 Q96M66 194 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 PKIBQ9C010 78 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 TLNRD1Q9H1K6 362 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 AUNIPQ9H7T9 357 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 FBLN5Q9UBX5 448 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 NOP16Q9Y3C1 178 aaKnown RBP9.07□□□□□ -0.96
TDP1-211ENST00000555178 MED13LQ71F56 2210 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 ARHGAP32A7KAX9 2087 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 TRAV18A0A075B6X5 111 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 MEIOCA2RUB1 952 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 TRAPPC2LH3BP13 241 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 HLA-DQB1P01920 261 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 PGA5P0DJD9 388 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 GNB3P16520 340 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 PRKACAP17612 351 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 TMEM50BP56557 158 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 BAK1Q16611 211 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 PYDC2Q56P42 97 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 PLAC9Q5JTB6 97 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 SIGIRRQ6IA17 410 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 OSR2Q8N2R0 312 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 ZSCAN4Q8NAM6 433 aaPredicted RBP9.07□□□□□ -0.96
TDP1-211ENST00000555178 RAB40AQ8WXH6 277 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 YIPF5Q969M3 257 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 WDR12Q9GZL7 423 aaKnown RBP9.07□□□□□ -0.96
TDP1-211ENST00000555178 GCM1Q9NP62 436 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 IL36GQ9NZH8 169 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 GHRLQ9UBU3 117 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 ST3GAL6Q9Y274 331 aa9.07□□□□□ -0.96
TDP1-211ENST00000555178 FLNBO75369 2602 aaKnown RBP9.07□□□□□ -0.96
TDP1-211ENST00000555178 SETXQ7Z333 2677 aaKnown RBP9.07□□□□□ -0.96
TDP1-211ENST00000555178 TMEM235A6NFC5 223 aa9.06□□□□□ -0.96
TDP1-211ENST00000555178 OVOL3O00110 214 aa9.06□□□□□ -0.96
TDP1-211ENST00000555178 TPD52L2O43399 206 aaKnown RBP9.06□□□□□ -0.96
TDP1-211ENST00000555178 LANCL1O43813 399 aa9.06□□□□□ -0.96
TDP1-211ENST00000555178 PTBP3O95758 552 aaKnown RBP9.06□□□□□ -0.96
TDP1-211ENST00000555178 CYB5R3P00387 301 aaPredicted RBP9.06□□□□□ -0.96
TDP1-211ENST00000555178 FCER2P06734 321 aa9.06□□□□□ -0.96
TDP1-211ENST00000555178 GTF2F2P13984 249 aa9.06□□□□□ -0.96
TDP1-211ENST00000555178 CD40LGP29965 261 aa9.06□□□□□ -0.96
TDP1-211ENST00000555178 PITPNBP48739 271 aa9.06□□□□□ -0.96
TDP1-211ENST00000555178 CEBPDP49716 269 aaPredicted RBP9.06□□□□□ -0.96
TDP1-211ENST00000555178 RBM11P57052 281 aaKnown RBP9.06□□□□□ -0.96
TDP1-211ENST00000555178 SNRPD2P62316 118 aaKnown RBP9.06□□□□□ -0.96
TDP1-211ENST00000555178 DGCR2P98153 550 aa9.06□□□□□ -0.96
TDP1-211ENST00000555178 ZNF45Q02386 682 aa9.06□□□□□ -0.96
TDP1-211ENST00000555178 GUCA2AQ02747 115 aa9.06□□□□□ -0.96
TDP1-211ENST00000555178 AGAP6Q5VW22 663 aa9.06□□□□□ -0.96
TDP1-211ENST00000555178 MKXQ8IYA7 352 aa9.06□□□□□ -0.96
TDP1-211ENST00000555178 BOLLQ8N9W6 283 aaKnown RBP9.06□□□□□ -0.96
TDP1-211ENST00000555178 SPERTQ8NA61 448 aa9.06□□□□□ -0.96
TDP1-211ENST00000555178 LRRC29Q8WV35 223 aa9.06□□□□□ -0.96
TDP1-211ENST00000555178 DYRK2Q92630 601 aa9.06□□□□□ -0.96
TDP1-211ENST00000555178 EMG1Q92979 244 aaKnown RBP9.06□□□□□ -0.96
TDP1-211ENST00000555178 PTX4Q96A99 478 aa9.06□□□□□ -0.96
TDP1-211ENST00000555178 CMTM3Q96MX0 182 aa9.06□□□□□ -0.96
TDP1-211ENST00000555178 NRIP2Q9BQI9 281 aa9.06□□□□□ -0.96
TDP1-211ENST00000555178 ZDHHC8Q9ULC8 765 aa9.06□□□□□ -0.96
TDP1-211ENST00000555178 PLEKHA6Q9Y2H5 1048 aa9.06□□□□□ -0.96
TDP1-211ENST00000555178 KCNK7Q9Y2U2 307 aa9.06□□□□□ -0.96
TDP1-211ENST00000555178 ZNF469Q96JG9 3925 aaPredicted RBP9.05□□□□□ -0.96
TDP1-211ENST00000555178 MEIS3P1A6NDR6 274 aa9.05□□□□□ -0.96
TDP1-211ENST00000555178 FOXI3A8MTJ6 420 aaPredicted RBP9.05□□□□□ -0.96
TDP1-211ENST00000555178 VSTM5A8MXK1 200 aa9.05□□□□□ -0.96
TDP1-211ENST00000555178 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.05□□□□□ -0.96
TDP1-211ENST00000555178 XRCC3O43542 346 aa9.05□□□□□ -0.96
TDP1-211ENST00000555178 CYB5AP00167 134 aa9.05□□□□□ -0.96
TDP1-211ENST00000555178 ERVK11-1P61568 191 aa9.05□□□□□ -0.96
TDP1-211ENST00000555178 NKAPLQ5M9Q1 402 aa9.05□□□□□ -0.96
TDP1-211ENST00000555178 DCDC5Q6ZRR9 648 aa9.05□□□□□ -0.96
TDP1-211ENST00000555178 SAXO1Q8IYX7 474 aa9.05□□□□□ -0.96
TDP1-211ENST00000555178 CHST4Q8NCG5 386 aa9.05□□□□□ -0.96
TDP1-211ENST00000555178 C14orf79Q96F83 325 aa9.05□□□□□ -0.96
TDP1-211ENST00000555178 ARHGAP5-AS1Q96IT6 56 aa9.05□□□□□ -0.96
TDP1-211ENST00000555178 TM2D1Q9BX74 207 aa9.05□□□□□ -0.96
TDP1-211ENST00000555178 IL19Q9UHD0 177 aa9.05□□□□□ -0.96
TDP1-211ENST00000555178 NAV2Q8IVL1 2488 aa9.05□□□□□ -0.96
TDP1-211ENST00000555178 AKAP9Q99996 3911 aa9.05□□□□□ -0.96
TDP1-211ENST00000555178 ZANQ9Y493 2812 aa9.05□□□□□ -0.96
TDP1-211ENST00000555178 IGHV3OR15-7A0A075B7D8 119 aa9.05□□□□□ -0.96
TDP1-211ENST00000555178 HSPB6O14558 160 aa9.05□□□□□ -0.96
TDP1-211ENST00000555178 NXPH2O95156 264 aa9.05□□□□□ -0.96
TDP1-211ENST00000555178 ADH4P08319 380 aa9.05□□□□□ -0.96
TDP1-211ENST00000555178 SRP9P49458 86 aaKnown RBP9.05□□□□□ -0.96
TDP1-211ENST00000555178 PPP5CP53041 499 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms