RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 NKX6-3A6NJ46 265 aa10.2□□□□□ -0.78
SYNE2-214ENST00000554928 NDUFB3O43676 98 aa10.2□□□□□ -0.78
SYNE2-214ENST00000554928 SULT1B1O43704 296 aa10.2□□□□□ -0.78
SYNE2-214ENST00000554928 OCM2P0CE71 109 aa10.2□□□□□ -0.78
SYNE2-214ENST00000554928 MMP9P14780 707 aa10.2□□□□□ -0.78
SYNE2-214ENST00000554928 GATA3P23771 443 aa10.2□□□□□ -0.78
SYNE2-214ENST00000554928 DUSP1P28562 367 aa10.2□□□□□ -0.78
SYNE2-214ENST00000554928 PRDX2P32119 198 aa10.2□□□□□ -0.78
SYNE2-214ENST00000554928 NPY4RP50391 375 aa10.2□□□□□ -0.78
SYNE2-214ENST00000554928 IL13RA1P78552 427 aa10.2□□□□□ -0.78
SYNE2-214ENST00000554928 PDZK1IP1Q13113 114 aa10.2□□□□□ -0.78
SYNE2-214ENST00000554928 MED21Q13503 144 aa10.2□□□□□ -0.78
SYNE2-214ENST00000554928 SMIM21Q3B7S5 101 aa10.2□□□□□ -0.78
SYNE2-214ENST00000554928 LHFPL2Q6ZUX7 228 aa10.2□□□□□ -0.78
SYNE2-214ENST00000554928 SLC36A1Q7Z2H8 476 aa10.2□□□□□ -0.78
SYNE2-214ENST00000554928 SERPINA12Q8IW75 414 aa10.2□□□□□ -0.78
SYNE2-214ENST00000554928 BCL6BQ8N143 479 aaPredicted RBP10.2□□□□□ -0.78
SYNE2-214ENST00000554928 LY6G5BQ8NDX9 201 aa10.2□□□□□ -0.78
SYNE2-214ENST00000554928 TMEM185AQ8NFB2 350 aa10.2□□□□□ -0.78
SYNE2-214ENST00000554928 OR52N4Q8NGI2 321 aa10.2□□□□□ -0.78
SYNE2-214ENST00000554928 HAVCR2Q8TDQ0 301 aa10.2□□□□□ -0.78
SYNE2-214ENST00000554928 MYDGFQ969H8 173 aa10.2□□□□□ -0.78
SYNE2-214ENST00000554928 TMEM106AQ96A25 262 aa10.2□□□□□ -0.78
SYNE2-214ENST00000554928 SDSLQ96GA7 329 aa10.2□□□□□ -0.78
SYNE2-214ENST00000554928 OR14A2Q96R54 314 aa10.2□□□□□ -0.78
SYNE2-214ENST00000554928 TBX15Q96SF7 602 aa10.2□□□□□ -0.78
SYNE2-214ENST00000554928 ZNF184Q99676 751 aaPredicted RBP10.2□□□□□ -0.78
SYNE2-214ENST00000554928 RASL12Q9NYN1 266 aa10.2□□□□□ -0.78
SYNE2-214ENST00000554928 SLC25A10Q9UBX3 287 aaPredicted RBP10.2□□□□□ -0.78
SYNE2-214ENST00000554928 RPUSD1Q9UJJ7 312 aaKnown RBP10.2□□□□□ -0.78
SYNE2-214ENST00000554928 ERGIC3Q9Y282 383 aa10.2□□□□□ -0.78
SYNE2-214ENST00000554928 TPRKBQ9Y3C4 175 aa10.2□□□□□ -0.78
SYNE2-214ENST00000554928 TRBV5-7A0A0A0MS05 114 aa10.19□□□□□ -0.78
SYNE2-214ENST00000554928 TMEM82A0PJX8 343 aa10.19□□□□□ -0.78
SYNE2-214ENST00000554928 MEX3AA1L020 520 aaKnown RBP10.19□□□□□ -0.78
SYNE2-214ENST00000554928 GABRPO00591 440 aa10.19□□□□□ -0.78
SYNE2-214ENST00000554928 LCE2BO14633 110 aa10.19□□□□□ -0.78
SYNE2-214ENST00000554928 RGS10O43665 173 aa10.19□□□□□ -0.78
SYNE2-214ENST00000554928 ENSAO43768 121 aaKnown RBP10.19□□□□□ -0.78
SYNE2-214ENST00000554928 HCKP08631 526 aa10.19□□□□□ -0.78
SYNE2-214ENST00000554928 IGFBP3P17936 291 aaPredicted RBP10.19□□□□□ -0.78
SYNE2-214ENST00000554928 EPHA1P21709 976 aa10.19□□□□□ -0.78
SYNE2-214ENST00000554928 ARF6P62330 175 aa10.19□□□□□ -0.78
SYNE2-214ENST00000554928 KISS1Q15726 138 aa10.19□□□□□ -0.78
SYNE2-214ENST00000554928 FAM27D1Q5T7N8 215 aa10.19□□□□□ -0.78
SYNE2-214ENST00000554928 BTNL3Q6UXE8 466 aa10.19□□□□□ -0.78
SYNE2-214ENST00000554928 OR5D14Q8NGL3 314 aa10.19□□□□□ -0.78
SYNE2-214ENST00000554928 H1FXQ92522 213 aaKnown RBP10.19□□□□□ -0.78
SYNE2-214ENST00000554928 EMG1Q92979 244 aaKnown RBP10.19□□□□□ -0.78
SYNE2-214ENST00000554928 UPRTQ96BW1 309 aa10.19□□□□□ -0.78
SYNE2-214ENST00000554928 MDFIQ99750 246 aa10.19□□□□□ -0.78
SYNE2-214ENST00000554928 DCTN5Q9BTE1 182 aa10.19□□□□□ -0.78
SYNE2-214ENST00000554928 MRI1Q9BV20 369 aa10.19□□□□□ -0.78
SYNE2-214ENST00000554928 MND1Q9BWT6 205 aa10.19□□□□□ -0.78
SYNE2-214ENST00000554928 CCDC90BQ9GZT6 254 aa10.19□□□□□ -0.78
SYNE2-214ENST00000554928 SIRPDQ9H106 197 aa10.19□□□□□ -0.78
SYNE2-214ENST00000554928 DNTTIP1Q9H147 329 aa10.19□□□□□ -0.78
SYNE2-214ENST00000554928 ZNF69Q9UC07 566 aa10.19□□□□□ -0.78
SYNE2-214ENST00000554928 TRAV40A0A0B4J280 105 aa10.18□□□□□ -0.78
SYNE2-214ENST00000554928 ALX3O95076 343 aa10.18□□□□□ -0.78
SYNE2-214ENST00000554928 KNG1P01042 644 aa10.18□□□□□ -0.78
SYNE2-214ENST00000554928 OCMP0CE72 109 aaPredicted RBP10.18□□□□□ -0.78
SYNE2-214ENST00000554928 NDUFB7P17568 137 aa10.18□□□□□ -0.78
SYNE2-214ENST00000554928 PRKACAP17612 351 aa10.18□□□□□ -0.78
SYNE2-214ENST00000554928 RAB3AP20336 220 aa10.18□□□□□ -0.78
SYNE2-214ENST00000554928 OR3A4PP47883 348 aa10.18□□□□□ -0.78
SYNE2-214ENST00000554928 GP2P55259 537 aaKnown RBP10.18□□□□□ -0.78
SYNE2-214ENST00000554928 TAS2R43P59537 309 aa10.18□□□□□ -0.78
SYNE2-214ENST00000554928 COL10A1Q03692 680 aa10.18□□□□□ -0.78
SYNE2-214ENST00000554928 ACSM1Q08AH1 577 aa10.18□□□□□ -0.78
SYNE2-214ENST00000554928 PDCD1Q15116 288 aa10.18□□□□□ -0.78
SYNE2-214ENST00000554928 SPHARQ15513 63 aa10.18□□□□□ -0.78
SYNE2-214ENST00000554928 MED22Q15528 200 aa10.18□□□□□ -0.78
SYNE2-214ENST00000554928 KRTAP21-3Q3LHN1 58 aa10.18□□□□□ -0.78
SYNE2-214ENST00000554928 Q499Y3 187 aa10.18□□□□□ -0.78
SYNE2-214ENST00000554928 YIF1BQ5BJH7 314 aa10.18□□□□□ -0.78
SYNE2-214ENST00000554928 LRRC10Q5BKY1 277 aa10.18□□□□□ -0.78
SYNE2-214ENST00000554928 CD276Q5ZPR3 534 aa10.18□□□□□ -0.78
SYNE2-214ENST00000554928 RUSC1-AS1Q66K80 236 aa10.18□□□□□ -0.78
SYNE2-214ENST00000554928 SATL1Q86VE3 508 aa10.18□□□□□ -0.78
SYNE2-214ENST00000554928 NANPQ8TBE9 248 aa10.18□□□□□ -0.78
SYNE2-214ENST00000554928 MED30Q96HR3 178 aa10.18□□□□□ -0.78
SYNE2-214ENST00000554928 DERL3Q96Q80 235 aa10.18□□□□□ -0.78
SYNE2-214ENST00000554928 SLC6A7Q99884 636 aa10.18□□□□□ -0.78
SYNE2-214ENST00000554928 PCGF1Q9BSM1 259 aa10.18□□□□□ -0.78
SYNE2-214ENST00000554928 PPIL3Q9H2H8 161 aaKnown RBP10.18□□□□□ -0.78
SYNE2-214ENST00000554928 NEK6Q9HC98 313 aa10.18□□□□□ -0.78
SYNE2-214ENST00000554928 C19orf12Q9NSK7 152 aa10.18□□□□□ -0.78
SYNE2-214ENST00000554928 ZNF581Q9P0T4 197 aa10.18□□□□□ -0.78
SYNE2-214ENST00000554928 DOCK11Q5JSL3 2073 aa10.18□□□□□ -0.78
SYNE2-214ENST00000554928 ZNF879B4DU55 563 aa10.17□□□□□ -0.78
SYNE2-214ENST00000554928 DENRO43583 198 aaKnown RBP10.17□□□□□ -0.78
SYNE2-214ENST00000554928 ZNF737O75373 536 aa10.17□□□□□ -0.78
SYNE2-214ENST00000554928 KDM4BO94953 1096 aa10.17□□□□□ -0.78
SYNE2-214ENST00000554928 VENTXO95231 258 aa10.17□□□□□ -0.78
SYNE2-214ENST00000554928 CD1AP06126 327 aa10.17□□□□□ -0.78
SYNE2-214ENST00000554928 PPIAL4GP0DN37 164 aa10.17□□□□□ -0.78
SYNE2-214ENST00000554928 TMEM225BP0DP42 221 aa10.17□□□□□ -0.78
SYNE2-214ENST00000554928 CAPZA1P52907 286 aa10.17□□□□□ -0.78
SYNE2-214ENST00000554928 CAV3P56539 151 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms