RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 TNFP01375 233 aa13.73□□□□□ -0.21
SYNE3-203ENST00000554873 ELLP55199 621 aaPredicted RBP13.73□□□□□ -0.21
SYNE3-203ENST00000554873 SLC37A1P57057 533 aa13.73□□□□□ -0.21
SYNE3-203ENST00000554873 QRFPP83859 136 aa13.73□□□□□ -0.21
SYNE3-203ENST00000554873 MFGE8Q08431 387 aaPredicted RBP13.73□□□□□ -0.21
SYNE3-203ENST00000554873 P2RY6Q15077 328 aa13.73□□□□□ -0.21
SYNE3-203ENST00000554873 LEMD1Q68G75 181 aa13.73□□□□□ -0.21
SYNE3-203ENST00000554873 ARMC6Q6NXE6 501 aa13.73□□□□□ -0.21
SYNE3-203ENST00000554873 FBXO46Q6PJ61 603 aaPredicted RBP13.73□□□□□ -0.21
SYNE3-203ENST00000554873 ZNF321PQ8N8H1 164 aa13.73□□□□□ -0.21
SYNE3-203ENST00000554873 OR10G4Q8NGN3 311 aa13.73□□□□□ -0.21
SYNE3-203ENST00000554873 EXTL1Q92935 676 aa13.73□□□□□ -0.21
SYNE3-203ENST00000554873 RTN4RQ9BZR6 473 aa13.73□□□□□ -0.21
SYNE3-203ENST00000554873 OR2J1Q9GZK6 312 aa13.73□□□□□ -0.21
SYNE3-203ENST00000554873 NAGKQ9UJ70 344 aa13.73□□□□□ -0.21
SYNE3-203ENST00000554873 TDRD6O60522 2096 aaKnown RBP13.73□□□□□ -0.21
SYNE3-203ENST00000554873 MYO9BQ13459 2157 aa13.73□□□□□ -0.21
SYNE3-203ENST00000554873 SCDO00767 359 aa13.73□□□□□ -0.21
SYNE3-203ENST00000554873 UTS2O95399 124 aa13.73□□□□□ -0.21
SYNE3-203ENST00000554873 BPNT1O95861 308 aa13.73□□□□□ -0.21
SYNE3-203ENST00000554873 ZNF880Q6PDB4 577 aa13.73□□□□□ -0.21
SYNE3-203ENST00000554873 SLC22A18ASQ8N1D0 253 aa13.73□□□□□ -0.21
SYNE3-203ENST00000554873 C11orf42Q8N5U0 333 aa13.73□□□□□ -0.21
SYNE3-203ENST00000554873 OR5L2Q8NGL0 311 aa13.73□□□□□ -0.21
SYNE3-203ENST00000554873 HAS2Q92819 552 aa13.73□□□□□ -0.21
SYNE3-203ENST00000554873 FAM122AQ96E09 287 aa13.73□□□□□ -0.21
SYNE3-203ENST00000554873 ZNF700Q9H0M5 742 aa13.73□□□□□ -0.21
SYNE3-203ENST00000554873 GSX1Q9H4S2 264 aaPredicted RBP13.73□□□□□ -0.21
SYNE3-203ENST00000554873 FBRSQ9HAH7 460 aa13.73□□□□□ -0.21
SYNE3-203ENST00000554873 HHLA2Q9UM44 414 aa13.73□□□□□ -0.21
SYNE3-203ENST00000554873 B9D1Q9UPM9 204 aa13.73□□□□□ -0.21
SYNE3-203ENST00000554873 MBPP02686 304 aaPredicted RBP13.72□□□□□ -0.21
SYNE3-203ENST00000554873 VSIG8P0DPA2 414 aa13.72□□□□□ -0.21
SYNE3-203ENST00000554873 PTGER4P35408 488 aa13.72□□□□□ -0.21
SYNE3-203ENST00000554873 YPEL5P62699 121 aa13.72□□□□□ -0.21
SYNE3-203ENST00000554873 COL5A1-AS1Q5SY13 56 aa13.72□□□□□ -0.21
SYNE3-203ENST00000554873 PTCRAQ6ISU1 281 aaPredicted RBP13.72□□□□□ -0.21
SYNE3-203ENST00000554873 RTN4RL2Q86UN3 420 aa13.72□□□□□ -0.21
SYNE3-203ENST00000554873 CATSPERDQ86XM0 798 aa13.72□□□□□ -0.21
SYNE3-203ENST00000554873 OR2G3Q8NGZ4 309 aa13.72□□□□□ -0.21
SYNE3-203ENST00000554873 MIEN1Q9BRT3 115 aa13.72□□□□□ -0.21
SYNE3-203ENST00000554873 CTDSP1Q9GZU7 261 aa13.72□□□□□ -0.21
SYNE3-203ENST00000554873 AK3Q9UIJ7 227 aa13.72□□□□□ -0.21
SYNE3-203ENST00000554873 HSF4Q9ULV5 492 aa13.72□□□□□ -0.21
SYNE3-203ENST00000554873 RANBP2P49792 3224 aaKnown RBP13.72□□□□□ -0.21
SYNE3-203ENST00000554873 KIR2DS5A0A0G2JLQ3 304 aa13.72□□□□□ -0.21
SYNE3-203ENST00000554873 A0A0G2JNG1 304 aa13.72□□□□□ -0.21
SYNE3-203ENST00000554873 CDC14CA4D256 554 aa13.72□□□□□ -0.21
SYNE3-203ENST00000554873 KIR2DS3K7RE56 304 aa13.72□□□□□ -0.21
SYNE3-203ENST00000554873 ATXN7O15265 892 aaPredicted RBP13.72□□□□□ -0.21
SYNE3-203ENST00000554873 KNG1P01042 644 aa13.72□□□□□ -0.21
SYNE3-203ENST00000554873 LCATP04180 440 aa13.72□□□□□ -0.21
SYNE3-203ENST00000554873 TNFSF10P50591 281 aa13.72□□□□□ -0.21
SYNE3-203ENST00000554873 IDH3GP51553 393 aaPredicted RBP13.72□□□□□ -0.21
SYNE3-203ENST00000554873 VAMP2P63027 116 aa13.72□□□□□ -0.21
SYNE3-203ENST00000554873 HHEXQ03014 270 aa13.72□□□□□ -0.21
SYNE3-203ENST00000554873 C1orf61Q13536 156 aa13.72□□□□□ -0.21
SYNE3-203ENST00000554873 KIR2DS5Q14953 304 aa13.72□□□□□ -0.21
SYNE3-203ENST00000554873 ZNF66Q6ZN08 573 aa13.72□□□□□ -0.21
SYNE3-203ENST00000554873 NUFIP2Q7Z417 695 aaKnown RBP13.72□□□□□ -0.21
SYNE3-203ENST00000554873 FAM160A2Q8N612 972 aaPredicted RBP13.72□□□□□ -0.21
SYNE3-203ENST00000554873 NXF5Q9H1B4 397 aaKnown RBP13.72□□□□□ -0.21
SYNE3-203ENST00000554873 MSL2Q9HCI7 577 aa13.72□□□□□ -0.21
SYNE3-203ENST00000554873 P4HTMQ9NXG6 502 aa13.72□□□□□ -0.21
SYNE3-203ENST00000554873 C14orf166Q9Y224 244 aaKnown RBP13.72□□□□□ -0.21
SYNE3-203ENST00000554873 FAM230AA0A1W2PPH8 454 aa13.72□□□□□ -0.21
SYNE3-203ENST00000554873 C17orf51A8MQB3 221 aa13.72□□□□□ -0.21
SYNE3-203ENST00000554873 WISP1O95388 367 aa13.72□□□□□ -0.21
SYNE3-203ENST00000554873 IL33O95760 270 aa13.72□□□□□ -0.21
SYNE3-203ENST00000554873 GSTP1P09211 210 aaKnown RBP13.72□□□□□ -0.21
SYNE3-203ENST00000554873 SP5Q6BEB4 398 aaPredicted RBP13.72□□□□□ -0.21
SYNE3-203ENST00000554873 ZNF100Q8IYN0 542 aa13.72□□□□□ -0.21
SYNE3-203ENST00000554873 ZFP62Q8NB50 900 aaPredicted RBP13.72□□□□□ -0.21
SYNE3-203ENST00000554873 TSLPQ969D9 159 aa13.72□□□□□ -0.21
SYNE3-203ENST00000554873 MMABQ96EY8 250 aaPredicted RBP13.72□□□□□ -0.21
SYNE3-203ENST00000554873 ABHD14AQ9BUJ0 271 aa13.72□□□□□ -0.21
SYNE3-203ENST00000554873 MRPL22Q9NWU5 206 aaKnown RBP13.72□□□□□ -0.21
SYNE3-203ENST00000554873 KIF26BQ2KJY2 2108 aa13.71□□□□□ -0.21
SYNE3-203ENST00000554873 C20orf202A1L168 122 aa13.71□□□□□ -0.21
SYNE3-203ENST00000554873 C17orf105B2RV13 164 aa13.71□□□□□ -0.21
SYNE3-203ENST00000554873 NXPH2O95156 264 aa13.71□□□□□ -0.21
SYNE3-203ENST00000554873 AHSA1O95433 338 aa13.71□□□□□ -0.21
SYNE3-203ENST00000554873 BGLAPP02818 100 aa13.71□□□□□ -0.21
SYNE3-203ENST00000554873 SELENOTP62341 195 aa13.71□□□□□ -0.21
SYNE3-203ENST00000554873 DEGS2Q6QHC5 323 aa13.71□□□□□ -0.21
SYNE3-203ENST00000554873 CLDND2Q8NHS1 167 aa13.71□□□□□ -0.21
SYNE3-203ENST00000554873 MRPL24Q96A35 216 aaKnown RBP13.71□□□□□ -0.21
SYNE3-203ENST00000554873 RBMXL1Q96E39 390 aaKnown RBP13.71□□□□□ -0.21
SYNE3-203ENST00000554873 SERINC1Q9NRX5 453 aa13.71□□□□□ -0.21
SYNE3-203ENST00000554873 SEC16AO15027 2179 aa13.71□□□□□ -0.22
SYNE3-203ENST00000554873 A8MVM7 634 aa13.71□□□□□ -0.22
SYNE3-203ENST00000554873 B4E171 279 aa13.71□□□□□ -0.22
SYNE3-203ENST00000554873 UMODP07911 640 aa13.71□□□□□ -0.22
SYNE3-203ENST00000554873 OR3A2P47893 321 aa13.71□□□□□ -0.22
SYNE3-203ENST00000554873 RPL23AP62750 156 aaKnown RBP13.71□□□□□ -0.22
SYNE3-203ENST00000554873 SLC18B1Q6NT16 456 aa13.71□□□□□ -0.22
SYNE3-203ENST00000554873 TMEM170AQ8WVE7 144 aa13.71□□□□□ -0.22
SYNE3-203ENST00000554873 ADOQ96SZ5 270 aa13.71□□□□□ -0.22
SYNE3-203ENST00000554873 C20orf144Q9BQM9 153 aa13.71□□□□□ -0.22
SYNE3-203ENST00000554873 PYGO2Q9BRQ0 406 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms