RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 AKR7LQ8NHP1 331 aa2.94□□□□□ -1.94
SEC23A-207ENST00000554615 CLDND2Q8NHS1 167 aa2.94□□□□□ -1.94
SEC23A-207ENST00000554615 CORO2AQ92828 525 aa2.94□□□□□ -1.94
SEC23A-207ENST00000554615 C11orf52Q96A22 123 aa2.94□□□□□ -1.94
SEC23A-207ENST00000554615 PLK3Q9H4B4 646 aa2.94□□□□□ -1.94
SEC23A-207ENST00000554615 CHMP1AQ9HD42 196 aaPredicted RBP2.94□□□□□ -1.94
SEC23A-207ENST00000554615 DEPPQ9NTK1 212 aa2.94□□□□□ -1.94
SEC23A-207ENST00000554615 MRPL15Q9P015 296 aaKnown RBP2.94□□□□□ -1.94
SEC23A-207ENST00000554615 JKAMPQ9P055 326 aa2.94□□□□□ -1.94
SEC23A-207ENST00000554615 KIAA1456Q9P272 454 aa2.94□□□□□ -1.94
SEC23A-207ENST00000554615 HSPB7Q9UBY9 170 aa2.94□□□□□ -1.94
SEC23A-207ENST00000554615 ZNF69Q9UC07 566 aa2.94□□□□□ -1.94
SEC23A-207ENST00000554615 ZNF629Q9UEG4 869 aaPredicted RBP2.94□□□□□ -1.94
SEC23A-207ENST00000554615 FREM3P0C091 2139 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 SAA2-SAA4A0A096LPE2 208 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 TRGV8A0A0C4DH27 118 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 LOC102723971A0A1B0GUV8 181 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 TMEM269A0A1B0GVZ9 245 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 DEGS1O15121 323 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 REG1AP05451 166 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 CD2P06729 351 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 HOXB5P09067 269 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 GTF2F2P13984 249 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 HOXA5P20719 270 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 CPT2P23786 658 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 TAGLN2P37802 199 aaKnown RBP2.93□□□□□ -1.94
SEC23A-207ENST00000554615 GNB2P62879 340 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 MRPS15P82914 257 aaKnown RBP2.93□□□□□ -1.94
SEC23A-207ENST00000554615 SORDQ00796 357 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 TESK1Q15569 626 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 CARTPTQ16568 116 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 SNAI3Q3KNW1 292 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 NKAIN1Q4KMZ8 207 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 FAAP20Q6NZ36 180 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 FAM219AQ8IW50 185 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 CCDC36Q8IYA8 594 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 IZUMO1Q8IYV9 350 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 TDHQ8IZJ6 230 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 ZNF439Q8NDP4 499 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 OR10AD1Q8NGE0 317 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 OR5A2Q8NGI9 324 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 OR5R1Q8NH85 324 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 Q8TCH9 128 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 CPNE4Q96A23 557 aaPredicted RBP2.93□□□□□ -1.94
SEC23A-207ENST00000554615 MMABQ96EY8 250 aaPredicted RBP2.93□□□□□ -1.94
SEC23A-207ENST00000554615 TBX5Q99593 518 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 SOX7Q9BT81 388 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 GGACTQ9BVM4 153 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 GPR35Q9HC97 309 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 MBD2Q9UBB5 411 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 CKLFQ9UBR5 152 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 C19orf25Q9UFG5 118 aaPredicted RBP2.93□□□□□ -1.94
SEC23A-207ENST00000554615 PFDN2Q9UHV9 154 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 AK3Q9UIJ7 227 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 SLC7A11Q9UPY5 501 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 ATP23Q9Y6H3 246 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 CEP350Q5VT06 3117 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 RALGAPA1Q6GYQ0 2036 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 USP34Q70CQ2 3546 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 A0A087X0M5 115 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 A0A1B0GX30 115 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 TMEM210A6NLX4 147 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 CDRT15L2A8MXV6 281 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 C21orf140B9A014 251 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 MEN1O00255 615 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 RBFOX2O43251 390 aaKnown RBP eCLIP2.93□□□□□ -1.942e-6■■■□□ 17.1
SEC23A-207ENST00000554615 DHHO43323 396 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 NME2P1O60361 137 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 PDCD6O75340 191 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 NEURL1O76050 574 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 SERPINA5P05154 406 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 CTXN2P0C2S0 81 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 TMEM225BP0DP42 221 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 PTHLHP12272 177 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 NME2P22392 152 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 RPL4P36578 427 aaKnown RBP2.93□□□□□ -1.94
SEC23A-207ENST00000554615 SERPINF1P36955 418 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 SELENOTP62341 195 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 ID2Q02363 134 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 ZNF726P1Q15940 193 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 ZNF343Q6P1L6 599 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 UEVLDQ8IX04 471 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 OR10K1Q8NGX5 313 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 OR1F12Q8NHA8 337 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 ZNF563Q8TA94 476 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 PHOSPHO1Q8TCT1 267 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 METTL21AQ8WXB1 218 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 BCL2L2Q92843 193 aaPredicted RBP2.93□□□□□ -1.94
SEC23A-207ENST00000554615 LRRC46Q96FV0 321 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 NARS2Q96I59 477 aaKnown RBP2.93□□□□□ -1.94
SEC23A-207ENST00000554615 ARHGAP5-AS1Q96IT6 56 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 CYYR1Q96J86 154 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 PRRX2Q99811 253 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 ATG5Q9H1Y0 275 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 RERGLQ9H628 205 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 CSAG2Q9Y5P2 127 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 CCDC187A0A096LP49 1063 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 A0A0J9YW62 118 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 C15orf65H3BRN8 121 aa2.93□□□□□ -1.94
SEC23A-207ENST00000554615 F2RL2O00254 374 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms