RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 SKA3Q8IX90 412 aa13.61□□□□□ -0.23
ARHGEF40-203ENST00000554514 SVBPQ8N300 66 aa13.61□□□□□ -0.23
ARHGEF40-203ENST00000554514 OR5T2Q8NGG2 359 aa13.61□□□□□ -0.23
ARHGEF40-203ENST00000554514 OR11L1Q8NGX0 322 aa13.61□□□□□ -0.23
ARHGEF40-203ENST00000554514 CNTNAP3Q9BZ76 1288 aa13.61□□□□□ -0.23
ARHGEF40-203ENST00000554514 PCDHB16Q9NRJ7 776 aa13.61□□□□□ -0.23
ARHGEF40-203ENST00000554514 TMEM100Q9NV29 134 aa13.61□□□□□ -0.23
ARHGEF40-203ENST00000554514 SHANK1Q9Y566 2161 aa13.61□□□□□ -0.23
ARHGEF40-203ENST00000554514 A0A096LPE4 126 aa13.61□□□□□ -0.23
ARHGEF40-203ENST00000554514 A0A1W2PPZ6 126 aa13.61□□□□□ -0.23
ARHGEF40-203ENST00000554514 CYC1P08574 325 aa13.61□□□□□ -0.23
ARHGEF40-203ENST00000554514 CST2P09228 141 aa13.61□□□□□ -0.23
ARHGEF40-203ENST00000554514 LPAR6P43657 344 aa13.61□□□□□ -0.23
ARHGEF40-203ENST00000554514 IGSF11Q5DX21 431 aa13.61□□□□□ -0.23
ARHGEF40-203ENST00000554514 TCEAL6Q6IPX3 200 aa13.61□□□□□ -0.23
ARHGEF40-203ENST00000554514 TCEAL3Q969E4 200 aa13.61□□□□□ -0.23
ARHGEF40-203ENST00000554514 WNT5BQ9H1J7 359 aa13.61□□□□□ -0.23
ARHGEF40-203ENST00000554514 NECAP2Q9NVZ3 263 aa13.61□□□□□ -0.23
ARHGEF40-203ENST00000554514 FBXL17Q9UF56 701 aa13.61□□□□□ -0.23
ARHGEF40-203ENST00000554514 FREM1Q5H8C1 2179 aa13.61□□□□□ -0.23
ARHGEF40-203ENST00000554514 CRYM-AS1A6NIL9 109 aa13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 ZNF587BE7ETH6 402 aa13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 CTSDP07339 412 aaPredicted RBP13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 SURF2Q15527 256 aaPredicted RBP13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 OSR2Q8N2R0 312 aa13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 OR2V1Q8NHB1 315 aa13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 SGCZQ96LD1 299 aa13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 CDX2Q99626 313 aaPredicted RBP13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 SF3B5Q9BWJ5 86 aaKnown RBP13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 OR2H1Q9GZK4 316 aa13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 LRRC3CA6NJW4 275 aa13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 LAMTOR5O43504 91 aa13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 OR7C1O76099 320 aaPredicted RBP13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 LYL1P12980 280 aa13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 DUSP3P51452 185 aaPredicted RBP13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 CLDN15P56746 228 aa13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 IL15RAQ13261 267 aa13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 ACER2Q5QJU3 275 aa13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 LYZL2Q7Z4W2 148 aa13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 RTN4IP1Q8WWV3 396 aaPredicted RBP13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 C10orf35Q96D05 121 aa13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 ZNF442Q9H7R0 627 aa13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 RHOFQ9HBH0 211 aa13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 MMP26Q9NRE1 261 aa13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 TCFL5Q9UL49 500 aa13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 TIMM10BQ9Y5J6 103 aa13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 MUC1P15941 1255 aaPredicted RBP13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 CHATP28329 748 aa13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 FAM3AP98173 230 aa13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 RTL6Q6ICC9 239 aa13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 CPT1CQ8TCG5 803 aa13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 ADAMTS17Q8TE56 1095 aa13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 BSCL2Q96G97 398 aaPredicted RBP13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 P4HTMQ9NXG6 502 aa13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 SLC7A11Q9UPY5 501 aa13.6□□□□□ -0.23
ARHGEF40-203ENST00000554514 HSPB6O14558 160 aa13.59□□□□□ -0.23
ARHGEF40-203ENST00000554514 NPBWR1P48145 328 aa13.59□□□□□ -0.23
ARHGEF40-203ENST00000554514 TMEM33P57088 247 aa13.59□□□□□ -0.23
ARHGEF40-203ENST00000554514 MEX3BQ6ZN04 569 aaKnown RBP13.59□□□□□ -0.23
ARHGEF40-203ENST00000554514 LHFPL2Q6ZUX7 228 aa13.59□□□□□ -0.23
ARHGEF40-203ENST00000554514 CALHM1Q8IU99 346 aa13.59□□□□□ -0.23
ARHGEF40-203ENST00000554514 SAV1Q9H4B6 383 aaPredicted RBP13.59□□□□□ -0.23
ARHGEF40-203ENST00000554514 GPR35Q9HC97 309 aa13.59□□□□□ -0.23
ARHGEF40-203ENST00000554514 UQCC1Q9NVA1 299 aa13.59□□□□□ -0.23
ARHGEF40-203ENST00000554514 OR6C6A6NF89 314 aa13.59□□□□□ -0.23
ARHGEF40-203ENST00000554514 NPBWR2P48146 333 aa13.59□□□□□ -0.23
ARHGEF40-203ENST00000554514 PJVKQ0ZLH3 352 aa13.59□□□□□ -0.23
ARHGEF40-203ENST00000554514 EIF3IQ13347 325 aaKnown RBP13.59□□□□□ -0.23
ARHGEF40-203ENST00000554514 PABPC1L2AQ5JQF8 200 aa13.59□□□□□ -0.23
ARHGEF40-203ENST00000554514 ERGIC1Q969X5 290 aa13.59□□□□□ -0.23
ARHGEF40-203ENST00000554514 PRRX2Q99811 253 aa13.59□□□□□ -0.23
ARHGEF40-203ENST00000554514 DNAJB11Q9UBS4 358 aa13.59□□□□□ -0.23
ARHGEF40-203ENST00000554514 KCNIP3Q9Y2W7 256 aa13.59□□□□□ -0.23
ARHGEF40-203ENST00000554514 FRYQ5TBA9 3013 aa13.58□□□□□ -0.23
ARHGEF40-203ENST00000554514 MED19A0JLT2 244 aaPredicted RBP13.58□□□□□ -0.24
ARHGEF40-203ENST00000554514 CER1O95813 267 aa13.58□□□□□ -0.24
ARHGEF40-203ENST00000554514 TRA2AQ13595 282 aaKnown RBP eCLIP13.58□□□□□ -0.24
ARHGEF40-203ENST00000554514 DCAF12Q5T6F0 453 aa13.58□□□□□ -0.24
ARHGEF40-203ENST00000554514 SLC25A26Q70HW3 274 aa13.58□□□□□ -0.24
ARHGEF40-203ENST00000554514 TIPARPQ7Z3E1 657 aaKnown RBP13.58□□□□□ -0.24
ARHGEF40-203ENST00000554514 TMEM105Q8N8V8 129 aa13.58□□□□□ -0.24
ARHGEF40-203ENST00000554514 CT55Q8WUE5 264 aa13.58□□□□□ -0.24
ARHGEF40-203ENST00000554514 KCNE4Q8WWG9 221 aa13.58□□□□□ -0.24
ARHGEF40-203ENST00000554514 DEDDO75618 318 aa13.58□□□□□ -0.24
ARHGEF40-203ENST00000554514 EDN3P14138 238 aa13.58□□□□□ -0.24
ARHGEF40-203ENST00000554514 NFYBP25208 207 aa13.58□□□□□ -0.24
ARHGEF40-203ENST00000554514 CYB561P49447 251 aa13.58□□□□□ -0.24
ARHGEF40-203ENST00000554514 PDZK1IP1Q13113 114 aa13.58□□□□□ -0.24
ARHGEF40-203ENST00000554514 PPA1Q15181 289 aa13.58□□□□□ -0.24
ARHGEF40-203ENST00000554514 WDR5BQ86VZ2 330 aa13.58□□□□□ -0.24
ARHGEF40-203ENST00000554514 GPHA2Q96T91 129 aa13.58□□□□□ -0.24
ARHGEF40-203ENST00000554514 AIFM2Q9BRQ8 373 aa13.58□□□□□ -0.24
ARHGEF40-203ENST00000554514 HES7Q9BYE0 225 aa13.58□□□□□ -0.24
ARHGEF40-203ENST00000554514 PURGQ9UJV8 347 aaKnown RBP13.58□□□□□ -0.24
ARHGEF40-203ENST00000554514 DOCK7Q96N67 2140 aa13.58□□□□□ -0.24
ARHGEF40-203ENST00000554514 NCOR1O75376 2440 aa13.57□□□□□ -0.24
ARHGEF40-203ENST00000554514 YKT6O15498 198 aa13.57□□□□□ -0.24
ARHGEF40-203ENST00000554514 RRP8O43159 456 aaKnown RBP13.57□□□□□ -0.24
ARHGEF40-203ENST00000554514 CELA3AP09093 270 aa13.57□□□□□ -0.24
ARHGEF40-203ENST00000554514 ASCL1P50553 236 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms