RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 VPS13DQ5THJ4 4388 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 A0A087X0M5 115 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 A0A0G2JND7 137 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 A0A1B0GX30 115 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 A0A1W2PPI3 338 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 hADV38S2A0JD32 116 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 PRR32B1ATL7 298 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 CCRL2O00421 344 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 FGF16O43320 207 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 PSPNO60542 156 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 NXPH2O95156 264 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 GADD45GO95257 159 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 IGHA1P01876 353 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 MAP2K3P46734 347 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 HAAOP46952 286 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 BLVRAP53004 296 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 EDDM3BP56851 147 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 RAB25P57735 213 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 HLA-DRB5Q30154 266 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 ZNF260Q3ZCT1 412 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 PRAMEF5Q5TYX0 476 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 LCN1P1Q5VSP4 162 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 PLCXD3Q63HM9 321 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 RPL13AP3Q6NVV1 102 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 Q6ZSR3 168 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 ZNF573Q86YE8 665 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 THNSL2Q86YJ6 484 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 ERI1Q8IV48 349 aaKnown RBP7.07□□□□□ -1.28
PRKCH-208ENST00000553846 ABHD12Q8N2K0 398 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 RNF148Q8N7C7 305 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 ASCC1Q8N9N2 400 aaKnown RBP7.07□□□□□ -1.28
PRKCH-208ENST00000553846 OR6N2Q8NGY6 317 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 GNPDA2Q8TDQ7 276 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 HIST1H2AAQ96QV6 131 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 NIPAL2Q9H841 368 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 MED20Q9H944 212 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 ZNF286AQ9HBT8 521 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 OR14J1Q9UGF5 321 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 POLDIP2Q9Y2S7 368 aa7.07□□□□□ -1.28
PRKCH-208ENST00000553846 FAM32AQ9Y421 112 aaKnown RBP7.07□□□□□ -1.28
PRKCH-208ENST00000553846 TRIM64CA6NLI5 447 aa7.06□□□□□ -1.28
PRKCH-208ENST00000553846 LEUTXA8MZ59 168 aa7.06□□□□□ -1.28
PRKCH-208ENST00000553846 OOSP1A8MZH6 123 aa7.06□□□□□ -1.28
PRKCH-208ENST00000553846 BUB1B-PAK6H3BSN5 160 aa7.06□□□□□ -1.28
PRKCH-208ENST00000553846 H3BUI4 141 aa7.06□□□□□ -1.28
PRKCH-208ENST00000553846 H2BFMP0C1H6 154 aa7.06□□□□□ -1.28
PRKCH-208ENST00000553846 ATP6V1B1P15313 513 aa7.06□□□□□ -1.28
PRKCH-208ENST00000553846 GSTT1P30711 240 aa7.06□□□□□ -1.28
PRKCH-208ENST00000553846 INSL3P51460 131 aa7.06□□□□□ -1.28
PRKCH-208ENST00000553846 HMGA2P52926 109 aa7.06□□□□□ -1.28
PRKCH-208ENST00000553846 ESRRGP62508 458 aa7.06□□□□□ -1.28
PRKCH-208ENST00000553846 IL24Q13007 206 aa7.06□□□□□ -1.28
PRKCH-208ENST00000553846 FOXE3Q13461 319 aa7.06□□□□□ -1.28
PRKCH-208ENST00000553846 KIAA0141Q14154 515 aaPredicted RBP7.06□□□□□ -1.28
PRKCH-208ENST00000553846 C9orf152Q5JTZ5 239 aa7.06□□□□□ -1.28
PRKCH-208ENST00000553846 CGB2Q6NT52 195 aa7.06□□□□□ -1.28
PRKCH-208ENST00000553846 HEPN1Q6WQI6 88 aa7.06□□□□□ -1.28
PRKCH-208ENST00000553846 RASSF6Q6ZTQ3 369 aa7.06□□□□□ -1.28
PRKCH-208ENST00000553846 MOB3CQ70IA8 216 aa7.06□□□□□ -1.28
PRKCH-208ENST00000553846 GDPD3Q7L5L3 318 aa7.06□□□□□ -1.28
PRKCH-208ENST00000553846 RTN4RL2Q86UN3 420 aa7.06□□□□□ -1.28
PRKCH-208ENST00000553846 DRAM1Q8N682 238 aa7.06□□□□□ -1.28
PRKCH-208ENST00000553846 OR9Q2Q8NGE9 314 aa7.06□□□□□ -1.28
PRKCH-208ENST00000553846 OR52L1Q8NGH7 329 aa7.06□□□□□ -1.28
PRKCH-208ENST00000553846 C4orf3Q8WVX3 66 aa7.06□□□□□ -1.28
PRKCH-208ENST00000553846 CAPSLQ8WWF8 208 aa7.06□□□□□ -1.28
PRKCH-208ENST00000553846 FAM162AQ96A26 154 aa7.06□□□□□ -1.28
PRKCH-208ENST00000553846 SNX22Q96L94 193 aa7.06□□□□□ -1.28
PRKCH-208ENST00000553846 TEAD3Q99594 435 aa7.06□□□□□ -1.28
PRKCH-208ENST00000553846 PKIBQ9C010 78 aa7.06□□□□□ -1.28
PRKCH-208ENST00000553846 ZMAT4Q9H898 229 aa7.06□□□□□ -1.28
PRKCH-208ENST00000553846 PAPOLBQ9NRJ5 636 aaKnown RBP7.06□□□□□ -1.28
PRKCH-208ENST00000553846 CMC2Q9NRP2 79 aa7.06□□□□□ -1.28
PRKCH-208ENST00000553846 C19orf73Q9NVV2 129 aa7.06□□□□□ -1.28
PRKCH-208ENST00000553846 MTCH1Q9NZJ7 389 aa7.06□□□□□ -1.28
PRKCH-208ENST00000553846 IL36RNQ9UBH0 155 aa7.06□□□□□ -1.28
PRKCH-208ENST00000553846 TNCP24821 2201 aa7.05□□□□□ -1.28
PRKCH-208ENST00000553846 DNAH6Q9C0G6 4158 aa7.05□□□□□ -1.28
PRKCH-208ENST00000553846 IGKV1-27A0A075B6S5 117 aa7.05□□□□□ -1.28
PRKCH-208ENST00000553846 ARRDC5A6NEK1 342 aa7.05□□□□□ -1.28
PRKCH-208ENST00000553846 ACOD1A6NK06 481 aa7.05□□□□□ -1.28
PRKCH-208ENST00000553846 FAM183AA6NL82 134 aa7.05□□□□□ -1.28
PRKCH-208ENST00000553846 SERPINE3A8MV23 424 aa7.05□□□□□ -1.28
PRKCH-208ENST00000553846 PSMD9O00233 223 aa7.05□□□□□ -1.28
PRKCH-208ENST00000553846 SELENOFO60613 162 aa7.05□□□□□ -1.28
PRKCH-208ENST00000553846 SRSF10O75494 262 aaKnown RBP7.05□□□□□ -1.28
PRKCH-208ENST00000553846 JTBO76095 146 aa7.05□□□□□ -1.28
PRKCH-208ENST00000553846 LYNP07948 512 aa7.05□□□□□ -1.28
PRKCH-208ENST00000553846 ERP29P30040 261 aaKnown RBP7.05□□□□□ -1.28
PRKCH-208ENST00000553846 OR3A1P47881 315 aa7.05□□□□□ -1.28
PRKCH-208ENST00000553846 SMIM11AP58511 58 aa7.05□□□□□ -1.28
PRKCH-208ENST00000553846 RIPPLY1Q0D2K3 151 aa7.05□□□□□ -1.28
PRKCH-208ENST00000553846 EDDM3AQ14507 147 aa7.05□□□□□ -1.28
PRKCH-208ENST00000553846 MAPRE2Q15555 327 aa7.05□□□□□ -1.28
PRKCH-208ENST00000553846 TEX38Q6PEX7 206 aa7.05□□□□□ -1.28
PRKCH-208ENST00000553846 SHFQ7M4L6 423 aa7.05□□□□□ -1.28
PRKCH-208ENST00000553846 Q8N6K4 173 aa7.05□□□□□ -1.28
PRKCH-208ENST00000553846 FAM81AQ8TBF8 368 aa7.05□□□□□ -1.28
PRKCH-208ENST00000553846 ZNF596Q8TC21 504 aa7.05□□□□□ -1.28
PRKCH-208ENST00000553846 CORO2AQ92828 525 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms