RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 ZNF610Q8N9Z0 462 aa10.73□□□□□ -0.69
SHMT2-207ENST00000553837 CCDC54Q8NEL0 328 aa10.73□□□□□ -0.69
SHMT2-207ENST00000553837 TMEM230Q96A57 120 aa10.73□□□□□ -0.69
SHMT2-207ENST00000553837 CDX2Q99626 313 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-207ENST00000553837 PTGES2Q9H7Z7 377 aa10.73□□□□□ -0.69
SHMT2-207ENST00000553837 LHFPL6Q9Y693 200 aa10.73□□□□□ -0.69
SHMT2-207ENST00000553837 DANCRP0C864 163 aa10.73□□□□□ -0.69
SHMT2-207ENST00000553837 PGA4P0DJD7 388 aa10.73□□□□□ -0.69
SHMT2-207ENST00000553837 PGA3P0DJD8 388 aa10.73□□□□□ -0.69
SHMT2-207ENST00000553837 CHATP28329 748 aa10.73□□□□□ -0.69
SHMT2-207ENST00000553837 FCGR2CP31995 323 aa10.73□□□□□ -0.69
SHMT2-207ENST00000553837 SFTPDP35247 375 aa10.73□□□□□ -0.69
SHMT2-207ENST00000553837 NPY4RP50391 375 aa10.73□□□□□ -0.69
SHMT2-207ENST00000553837 ZNF616Q08AN1 781 aa10.73□□□□□ -0.69
SHMT2-207ENST00000553837 CLINT1Q14677 625 aa10.73□□□□□ -0.69
SHMT2-207ENST00000553837 PCOLCEQ15113 449 aa10.73□□□□□ -0.69
SHMT2-207ENST00000553837 VAX1Q5SQQ9 334 aa10.73□□□□□ -0.69
SHMT2-207ENST00000553837 PMS2CLQ68D20 193 aa10.73□□□□□ -0.69
SHMT2-207ENST00000553837 OR2A2Q6IF42 318 aa10.73□□□□□ -0.69
SHMT2-207ENST00000553837 ZNF529Q6P280 563 aa10.73□□□□□ -0.69
SHMT2-207ENST00000553837 DEGS2Q6QHC5 323 aa10.73□□□□□ -0.69
SHMT2-207ENST00000553837 OR52N4Q8NGI2 321 aa10.73□□□□□ -0.69
SHMT2-207ENST00000553837 MAFAQ8NHW3 353 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-207ENST00000553837 SPACA9Q96E40 222 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-207ENST00000553837 GALNT14Q96FL9 552 aa10.73□□□□□ -0.69
SHMT2-207ENST00000553837 CYYR1Q96J86 154 aa10.73□□□□□ -0.69
SHMT2-207ENST00000553837 NUDT16L1Q9BRJ7 211 aaKnown RBP10.73□□□□□ -0.69
SHMT2-207ENST00000553837 CNTD2Q9H8S5 307 aa10.73□□□□□ -0.69
SHMT2-207ENST00000553837 FBXL17Q9UF56 701 aa10.73□□□□□ -0.69
SHMT2-207ENST00000553837 SLC5A6Q9Y289 635 aa10.73□□□□□ -0.69
SHMT2-207ENST00000553837 CHCHD2Q9Y6H1 151 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-207ENST00000553837 TMEM210A6NLX4 147 aa10.72□□□□□ -0.69
SHMT2-207ENST00000553837 A8MWP6 167 aa10.72□□□□□ -0.69
SHMT2-207ENST00000553837 MASP2O00187 686 aa10.72□□□□□ -0.69
SHMT2-207ENST00000553837 PPP1R2P9O14990 202 aa10.72□□□□□ -0.69
SHMT2-207ENST00000553837 NME2P1O60361 137 aa10.72□□□□□ -0.69
SHMT2-207ENST00000553837 SEC11BP0C7V7 166 aa10.72□□□□□ -0.69
SHMT2-207ENST00000553837 GNB3P16520 340 aa10.72□□□□□ -0.69
SHMT2-207ENST00000553837 THBS4P35443 961 aa10.72□□□□□ -0.69
SHMT2-207ENST00000553837 TMEM33P57088 247 aa10.72□□□□□ -0.69
SHMT2-207ENST00000553837 RPUSD3Q6P087 351 aaKnown RBP10.72□□□□□ -0.69
SHMT2-207ENST00000553837 UNQ6494/PRO21346Q6UXR6 183 aa10.72□□□□□ -0.69
SHMT2-207ENST00000553837 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-207ENST00000553837 DEFB126Q9BYW3 111 aa10.72□□□□□ -0.69
SHMT2-207ENST00000553837 PBOV1Q9GZY1 135 aa10.72□□□□□ -0.69
SHMT2-207ENST00000553837 PARP12Q9H0J9 701 aaKnown RBP10.72□□□□□ -0.69
SHMT2-207ENST00000553837 ZNF319Q9P2F9 582 aa10.72□□□□□ -0.69
SHMT2-207ENST00000553837 WDFY4Q6ZS81 3184 aa10.72□□□□□ -0.69
SHMT2-207ENST00000553837 FIGNL2A6NMB9 653 aa10.72□□□□□ -0.69
SHMT2-207ENST00000553837 PATE3B3GLJ2 98 aa10.72□□□□□ -0.69
SHMT2-207ENST00000553837 RPL36A-HNRNPH2H7BZ11 118 aa10.72□□□□□ -0.69
SHMT2-207ENST00000553837 DLEU1O43261 78 aa10.72□□□□□ -0.69
SHMT2-207ENST00000553837 BPNT1O95861 308 aa10.72□□□□□ -0.69
SHMT2-207ENST00000553837 SFTPBP07988 381 aa10.72□□□□□ -0.69
SHMT2-207ENST00000553837 FPR2P25090 351 aa10.72□□□□□ -0.69
SHMT2-207ENST00000553837 CAMLGP49069 296 aa10.72□□□□□ -0.69
SHMT2-207ENST00000553837 CLDN6P56747 220 aa10.72□□□□□ -0.69
SHMT2-207ENST00000553837 SUPT4H1P63272 117 aaKnown RBP10.72□□□□□ -0.69
SHMT2-207ENST00000553837 UNC119Q13432 240 aa10.72□□□□□ -0.69
SHMT2-207ENST00000553837 ZNF674Q2M3X9 581 aa10.72□□□□□ -0.69
SHMT2-207ENST00000553837 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.72□□□□□ -0.69
SHMT2-207ENST00000553837 PEG10Q86TG7 708 aaKnown RBP10.72□□□□□ -0.69
SHMT2-207ENST00000553837 FOXRED2Q8IWF2 684 aa10.72□□□□□ -0.69
SHMT2-207ENST00000553837 UEVLDQ8IX04 471 aa10.72□□□□□ -0.69
SHMT2-207ENST00000553837 FADS6Q8N9I5 356 aa10.72□□□□□ -0.69
SHMT2-207ENST00000553837 NOXO1Q8NFA2 376 aa10.72□□□□□ -0.69
SHMT2-207ENST00000553837 IFI44Q8TCB0 444 aa10.72□□□□□ -0.69
SHMT2-207ENST00000553837 MUCL1Q96DR8 90 aa10.72□□□□□ -0.69
SHMT2-207ENST00000553837 GNRHR2Q96P88 292 aa10.72□□□□□ -0.69
SHMT2-207ENST00000553837 SMDT1Q9H4I9 107 aa10.72□□□□□ -0.69
SHMT2-207ENST00000553837 PRR13Q9NZ81 148 aa10.72□□□□□ -0.69
SHMT2-207ENST00000553837 ZNF587BE7ETH6 402 aa10.71□□□□□ -0.69
SHMT2-207ENST00000553837 UMODP07911 640 aa10.71□□□□□ -0.69
SHMT2-207ENST00000553837 RAC2P15153 192 aa10.71□□□□□ -0.69
SHMT2-207ENST00000553837 ZNF708P17019 499 aa10.71□□□□□ -0.69
SHMT2-207ENST00000553837 TMEM11P17152 192 aa10.71□□□□□ -0.69
SHMT2-207ENST00000553837 GNALP38405 381 aa10.71□□□□□ -0.69
SHMT2-207ENST00000553837 SUCLG1P53597 346 aaKnown RBP10.71□□□□□ -0.69
SHMT2-207ENST00000553837 QRFPP83859 136 aa10.71□□□□□ -0.69
SHMT2-207ENST00000553837 TMEM176BQ3YBM2 270 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-207ENST00000553837 SOHLH1Q5JUK2 328 aa10.71□□□□□ -0.69
SHMT2-207ENST00000553837 SLC25A47Q6Q0C1 308 aa10.71□□□□□ -0.69
SHMT2-207ENST00000553837 GPR137CQ8N3F9 429 aa10.71□□□□□ -0.69
SHMT2-207ENST00000553837 RTBDNQ9BSG5 229 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-207ENST00000553837 ARV1Q9H2C2 271 aa10.71□□□□□ -0.69
SHMT2-207ENST00000553837 GAB2Q9UQC2 676 aa10.71□□□□□ -0.69
SHMT2-207ENST00000553837 STRAPQ9Y3F4 350 aaKnown RBP10.71□□□□□ -0.69
SHMT2-207ENST00000553837 PUS1Q9Y606 427 aaKnown RBP eCLIP10.71□□□□□ -0.69
SHMT2-207ENST00000553837 BORCS7-ASMTA0A0B4J1R7 106 aa10.7□□□□□ -0.7
SHMT2-207ENST00000553837 A0A1B0GW64 132 aa10.7□□□□□ -0.7
SHMT2-207ENST00000553837 C5orf63A6NC05 138 aa10.7□□□□□ -0.7
SHMT2-207ENST00000553837 SYT7O43581 403 aa10.7□□□□□ -0.7
SHMT2-207ENST00000553837 CHRM2P08172 466 aa10.7□□□□□ -0.7
SHMT2-207ENST00000553837 OR13C7P0DN81 318 aa10.7□□□□□ -0.7
SHMT2-207ENST00000553837 FGF5P12034 268 aa10.7□□□□□ -0.7
SHMT2-207ENST00000553837 CCL4P13236 92 aa10.7□□□□□ -0.7
SHMT2-207ENST00000553837 ZNF84P51523 738 aa10.7□□□□□ -0.7
SHMT2-207ENST00000553837 CLRN1P58418 232 aa10.7□□□□□ -0.7
SHMT2-207ENST00000553837 SLC35A1P78382 337 aa10.7□□□□□ -0.7
SHMT2-207ENST00000553837 SUMF2Q8NBJ7 301 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms