RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 COMMD3-BMI1R4GMX3 469 aa3.94□□□□□ -1.78
ATXN3-220ENST00000553491 TEP1Q99973 2627 aaKnown RBP3.94□□□□□ -1.78
ATXN3-220ENST00000553491 ANKRD30BLA7E2S9 258 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 ZNF878C9JN71 531 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 F5H5P2 479 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 TGFAP01135 160 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 IGHV1-46P01743 117 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 APOC1P02654 83 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 CSF3P09919 207 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 PSKH1P11801 424 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 IRF2P14316 349 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 ANPEPP15144 967 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 PAX1P15863 534 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 SLC25A16P16260 332 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 SELEP16581 610 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 ZNF12P17014 697 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 CA6P23280 308 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 ALDH3A2P51648 485 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 RIDAP52758 137 aaKnown RBP3.93□□□□□ -1.78
ATXN3-220ENST00000553491 PPP5CP53041 499 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 ZNF121P58317 390 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-220ENST00000553491 GMFBP60983 142 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 CXCR4P61073 352 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 HIST1H3AP68431 136 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 IL5RAQ01344 420 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 ZNF92Q03936 586 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 GK2Q14410 553 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-220ENST00000553491 RSPO1Q2MKA7 263 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-220ENST00000553491 SNAI3Q3KNW1 292 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 SPRNQ5BIV9 151 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 SLC35D3Q5M8T2 416 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 GLYATL3Q5SZD4 288 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 HIST2H3PS2Q5TEC6 136 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 LINC01590Q5TEZ4 76 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 SLX4IPQ5VYV7 408 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 CYB5R2Q6BCY4 276 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 DRAM2Q6UX65 266 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 KCTD8Q6ZWB6 473 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 HIST2H3AQ71DI3 136 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 BIVMQ86UB2 503 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 SLC35F2Q8IXU6 374 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 TIGD4Q8IY51 512 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 ZNF786Q8N393 782 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 ZNF114Q8NC26 417 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 DEFB108BQ8NET1 73 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 OR8G5Q8NG78 346 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 OR10AD1Q8NGE0 317 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 OR10S1Q8NGN2 331 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 OR8S1Q8NH09 359 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 OR5R1Q8NH85 324 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 C10orf105Q8TEF2 133 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 ITLN1Q8WWA0 313 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 PIGCQ92535 297 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 RAB1CQ92928 201 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 YIPF5Q969M3 257 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 SGK3Q96BR1 496 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 TIMD4Q96H15 378 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 REEP6Q96HR9 211 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 AMELYQ99218 206 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 CNN2Q99439 309 aaKnown RBP3.93□□□□□ -1.78
ATXN3-220ENST00000553491 MROQ9BYG7 248 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 YIPF3Q9GZM5 350 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 GABARAPL1Q9H0R8 117 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 AMBNQ9NP70 447 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 ZNF275Q9NSD4 429 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-220ENST00000553491 PPP1R3CQ9UQK1 317 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 LRP12Q9Y561 859 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 CACNG2Q9Y698 323 aa3.93□□□□□ -1.78
ATXN3-220ENST00000553491 HIVEP1P15822 2718 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 DSCAML1Q8TD84 2053 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 IGLV3-9A0A075B6K5 115 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 LOC100130705A0A1B0GUX0 176 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 TMEM269A0A1B0GVZ9 245 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 DAPL1A0PJW8 107 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 C5orf63A6NC05 138 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 A6NIN4 97 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 ZSCAN5BA6NJL1 495 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 SNTNA6NMZ2 147 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 CD300LBA8K4G0 201 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 CLDN25C9JDP6 229 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 J3QLW9 94 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 XRCC2O43543 280 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 ENTPD6O75354 484 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 KDM4BO94953 1096 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 CYB5R3P00387 301 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-220ENST00000553491 KRT8P05787 483 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 ZNF19P17023 458 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 SLC2A5P22732 501 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 TUBG1P23258 451 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 CALRP27797 417 aaKnown RBP3.92□□□□□ -1.78
ATXN3-220ENST00000553491 CRYBB2P43320 205 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 SRP9P49458 86 aaKnown RBP3.92□□□□□ -1.78
ATXN3-220ENST00000553491 MMP15P51511 669 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 TMEM33P57088 247 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 ELF3P78545 371 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-220ENST00000553491 DMRTC1Q5HYR2 192 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 TEX30Q5JUR7 227 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 NXNL2Q5VZ03 156 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 C12orf73Q69YU5 71 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 ZNF322Q6U7Q0 402 aaPredicted RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms