RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 PDFQ9HBH1 243 aa3.89□□□□□ -1.79
SCFD1-208ENST00000553278 LRRC42Q9Y546 428 aa3.89□□□□□ -1.79
SCFD1-208ENST00000553278 NRCAMQ92823 1304 aa3.89□□□□□ -1.79
SCFD1-208ENST00000553278 SMIM23A6NLE4 172 aa3.88□□□□□ -1.79
SCFD1-208ENST00000553278 EFCAB9A8MZ26 197 aa3.88□□□□□ -1.79
SCFD1-208ENST00000553278 F5H5K5 113 aa3.88□□□□□ -1.79
SCFD1-208ENST00000553278 SLC16A4O15374 487 aa3.88□□□□□ -1.79
SCFD1-208ENST00000553278 OR56A5P0C7T3 313 aa3.88□□□□□ -1.79
SCFD1-208ENST00000553278 ZNF19P17023 458 aa3.88□□□□□ -1.79
SCFD1-208ENST00000553278 ATF1P18846 271 aa3.88□□□□□ -1.79
SCFD1-208ENST00000553278 IL3RAP26951 378 aa3.88□□□□□ -1.79
SCFD1-208ENST00000553278 NDPQ00604 133 aa3.88□□□□□ -1.79
SCFD1-208ENST00000553278 MADCAM1Q13477 382 aa3.88□□□□□ -1.79
SCFD1-208ENST00000553278 YIF1BQ5BJH7 314 aa3.88□□□□□ -1.79
SCFD1-208ENST00000553278 COQ5Q5HYK3 327 aa3.88□□□□□ -1.79
SCFD1-208ENST00000553278 TMEM156Q8N614 296 aa3.88□□□□□ -1.79
SCFD1-208ENST00000553278 OR4K5Q8NGD3 323 aa3.88□□□□□ -1.79
SCFD1-208ENST00000553278 ZNF420Q8TAQ5 688 aaPredicted RBP3.88□□□□□ -1.79
SCFD1-208ENST00000553278 ITFG2Q969R8 447 aa3.88□□□□□ -1.79
SCFD1-208ENST00000553278 ZNF414Q96IQ9 312 aa3.88□□□□□ -1.79
SCFD1-208ENST00000553278 C18orf15Q96N68 181 aa3.88□□□□□ -1.79
SCFD1-208ENST00000553278 RBP7Q96R05 134 aa3.88□□□□□ -1.79
SCFD1-208ENST00000553278 UGT2B28Q9BY64 529 aa3.88□□□□□ -1.79
SCFD1-208ENST00000553278 TBL1XR1Q9BZK7 514 aa3.88□□□□□ -1.79
SCFD1-208ENST00000553278 SLC19A3Q9BZV2 496 aa3.88□□□□□ -1.79
SCFD1-208ENST00000553278 TPK1Q9H3S4 243 aa3.88□□□□□ -1.79
SCFD1-208ENST00000553278 ZNRD1Q9P1U0 126 aa3.88□□□□□ -1.79
SCFD1-208ENST00000553278 FARSAQ9Y285 508 aaKnown RBP3.88□□□□□ -1.79
SCFD1-208ENST00000553278 PRG3Q9Y2Y8 225 aaPredicted RBP3.88□□□□□ -1.79
SCFD1-208ENST00000553278 POLR3HQ9Y535 204 aaPredicted RBP3.88□□□□□ -1.79
SCFD1-208ENST00000553278 INSIG2Q9Y5U4 225 aa3.88□□□□□ -1.79
SCFD1-208ENST00000553278 GPATCH8Q9UKJ3 1502 aaKnown RBP3.88□□□□□ -1.79
SCFD1-208ENST00000553278 A0A0G2JMP0 313 aa3.87□□□□□ -1.79
SCFD1-208ENST00000553278 A0A0X1KG70 313 aa3.87□□□□□ -1.79
SCFD1-208ENST00000553278 CENPBD1B2RD01 187 aa3.87□□□□□ -1.79
SCFD1-208ENST00000553278 H0YJW9 148 aa3.87□□□□□ -1.79
SCFD1-208ENST00000553278 UPK1AO00322 258 aa3.87□□□□□ -1.79
SCFD1-208ENST00000553278 SPAG7O75391 227 aa3.87□□□□□ -1.79
SCFD1-208ENST00000553278 APOEP02649 317 aa3.87□□□□□ -1.79
SCFD1-208ENST00000553278 COX5BP10606 129 aa3.87□□□□□ -1.79
SCFD1-208ENST00000553278 SLC2A1P11166 492 aa3.87□□□□□ -1.79
SCFD1-208ENST00000553278 KIR3DL2P43630 455 aa3.87□□□□□ -1.79
SCFD1-208ENST00000553278 PSMD7P51665 324 aa3.87□□□□□ -1.79
SCFD1-208ENST00000553278 LOXL1Q08397 574 aaPredicted RBP3.87□□□□□ -1.79
SCFD1-208ENST00000553278 RNF212Q495C1 297 aa3.87□□□□□ -1.79
SCFD1-208ENST00000553278 DNAL1Q4LDG9 190 aa3.87□□□□□ -1.79
SCFD1-208ENST00000553278 PDZD11Q5EBL8 140 aa3.87□□□□□ -1.79
SCFD1-208ENST00000553278 RIMKLAQ8IXN7 391 aa3.87□□□□□ -1.79
SCFD1-208ENST00000553278 BLIDQ8IZY5 108 aa3.87□□□□□ -1.79
SCFD1-208ENST00000553278 TMEM256Q8N2U0 113 aa3.87□□□□□ -1.79
SCFD1-208ENST00000553278 OR2M7Q8NG81 312 aa3.87□□□□□ -1.79
SCFD1-208ENST00000553278 ORAOV1Q8WV07 137 aa3.87□□□□□ -1.79
SCFD1-208ENST00000553278 NEURL3Q96EH8 262 aa3.87□□□□□ -1.79
SCFD1-208ENST00000553278 ZNF799Q96GE5 643 aa3.87□□□□□ -1.79
SCFD1-208ENST00000553278 NUDT9Q9BW91 350 aa3.87□□□□□ -1.79
SCFD1-208ENST00000553278 SLC25A31Q9H0C2 315 aa3.87□□□□□ -1.79
SCFD1-208ENST00000553278 LHX9Q9NQ69 397 aa3.87□□□□□ -1.79
SCFD1-208ENST00000553278 RPS6KB2Q9UBS0 482 aa3.87□□□□□ -1.79
SCFD1-208ENST00000553278 ZNF222Q9UK12 451 aa3.87□□□□□ -1.79
SCFD1-208ENST00000553278 MTCH2Q9Y6C9 303 aa3.87□□□□□ -1.79
SCFD1-208ENST00000553278 MAP3K5Q99683 1374 aa3.87□□□□□ -1.79
SCFD1-208ENST00000553278 IGHV3-72A0A0B4J1Y9 119 aa3.86□□□□□ -1.79
SCFD1-208ENST00000553278 TRAV8-2A0A0B4J237 113 aa3.86□□□□□ -1.79
SCFD1-208ENST00000553278 IGHV7-4-1A0A0J9YVY3 117 aa3.86□□□□□ -1.79
SCFD1-208ENST00000553278 LOC389332A0A1B0GUA5 103 aa3.86□□□□□ -1.79
SCFD1-208ENST00000553278 A0A1B0GXF2 115 aa3.86□□□□□ -1.79
SCFD1-208ENST00000553278 CCRL2O00421 344 aa3.86□□□□□ -1.79
SCFD1-208ENST00000553278 IGLV2-8P01709 118 aa3.86□□□□□ -1.79
SCFD1-208ENST00000553278 NEFHP12036 1026 aa3.86□□□□□ -1.79
SCFD1-208ENST00000553278 AKR1C4P17516 323 aa3.86□□□□□ -1.79
SCFD1-208ENST00000553278 KRTAP10-7P60409 375 aaPredicted RBP3.86□□□□□ -1.79
SCFD1-208ENST00000553278 TBC1D28Q2M2D7 210 aa3.86□□□□□ -1.79
SCFD1-208ENST00000553278 Q499Y3 187 aa3.86□□□□□ -1.79
SCFD1-208ENST00000553278 KCTD16Q68DU8 428 aa3.86□□□□□ -1.79
SCFD1-208ENST00000553278 DGAT2L6Q6ZPD8 337 aa3.86□□□□□ -1.79
SCFD1-208ENST00000553278 FAM231DQ6ZW35 169 aa3.86□□□□□ -1.79
SCFD1-208ENST00000553278 ZNF584Q8IVC4 421 aa3.86□□□□□ -1.79
SCFD1-208ENST00000553278 RNF133Q8WVZ7 376 aa3.86□□□□□ -1.79
SCFD1-208ENST00000553278 FMC1Q96HJ9 113 aa3.86□□□□□ -1.79
SCFD1-208ENST00000553278 NARS2Q96I59 477 aaKnown RBP3.86□□□□□ -1.79
SCFD1-208ENST00000553278 CDX2Q99626 313 aaPredicted RBP3.86□□□□□ -1.79
SCFD1-208ENST00000553278 PLEKHF2Q9H8W4 249 aa3.86□□□□□ -1.79
SCFD1-208ENST00000553278 PARP11Q9NR21 331 aa3.86□□□□□ -1.79
SCFD1-208ENST00000553278 C8orf17Q9NRJ1 99 aa3.86□□□□□ -1.79
SCFD1-208ENST00000553278 TMEM14AQ9Y6G1 99 aa3.86□□□□□ -1.79
SCFD1-208ENST00000553278 AGRNO00468 2067 aa3.86□□□□□ -1.79
SCFD1-208ENST00000553278 DYSFO75923 2080 aa3.86□□□□□ -1.79
SCFD1-208ENST00000553278 SIGLEC1Q9BZZ2 1709 aa3.86□□□□□ -1.79
SCFD1-208ENST00000553278 BRD4O60885 1362 aaPredicted RBP3.86□□□□□ -1.79
SCFD1-208ENST00000553278 TDRD6O60522 2096 aaKnown RBP3.85□□□□□ -1.79
SCFD1-208ENST00000553278 TMEM223A0PJW6 202 aa3.85□□□□□ -1.79
SCFD1-208ENST00000553278 C5orf63A6NC05 138 aa3.85□□□□□ -1.79
SCFD1-208ENST00000553278 PGPA6NDG6 321 aa3.85□□□□□ -1.79
SCFD1-208ENST00000553278 CEACAM18A8MTB9 384 aa3.85□□□□□ -1.79
SCFD1-208ENST00000553278 TMX2-CTNND1H3BSU7 103 aa3.85□□□□□ -1.79
SCFD1-208ENST00000553278 GPR171O14626 319 aa3.85□□□□□ -1.79
SCFD1-208ENST00000553278 ZW10O43264 779 aa3.85□□□□□ -1.79
SCFD1-208ENST00000553278 PLIN3O60664 434 aa3.85□□□□□ -1.79
SCFD1-208ENST00000553278 SCO1O75880 301 aa3.85□□□□□ -1.79
SCFD1-208ENST00000553278 OR2A4O95047 310 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms