RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 BTBD17A6NE02 478 aa9.69□□□□□ -0.86
CKAP4-202ENST00000552828 TMEM210A6NLX4 147 aa9.69□□□□□ -0.86
CKAP4-202ENST00000552828 NPFFO15130 113 aa9.69□□□□□ -0.86
CKAP4-202ENST00000552828 NDUFB3O43676 98 aa9.69□□□□□ -0.86
CKAP4-202ENST00000552828 XPNPEP2O43895 674 aa9.69□□□□□ -0.86
CKAP4-202ENST00000552828 TNFAIP8O95379 198 aa9.69□□□□□ -0.86
CKAP4-202ENST00000552828 CSF1P09603 554 aa9.69□□□□□ -0.86
CKAP4-202ENST00000552828 FAHP16930 419 aa9.69□□□□□ -0.86
CKAP4-202ENST00000552828 MYF6P23409 242 aa9.69□□□□□ -0.86
CKAP4-202ENST00000552828 EEF1B2P24534 225 aaKnown RBP9.69□□□□□ -0.86
CKAP4-202ENST00000552828 KIR3DL2P43630 455 aa9.69□□□□□ -0.86
CKAP4-202ENST00000552828 ETV1P50549 477 aa9.69□□□□□ -0.86
CKAP4-202ENST00000552828 UBE2E1P51965 193 aa9.69□□□□□ -0.86
CKAP4-202ENST00000552828 NANOS3P60323 173 aaKnown RBP9.69□□□□□ -0.86
CKAP4-202ENST00000552828 ALKBH1Q13686 389 aaKnown RBP9.69□□□□□ -0.86
CKAP4-202ENST00000552828 CLVS2Q5SYC1 327 aa9.69□□□□□ -0.86
CKAP4-202ENST00000552828 C6orf141Q5SZD1 244 aa9.69□□□□□ -0.86
CKAP4-202ENST00000552828 KPRPQ5T749 579 aaPredicted RBP9.69□□□□□ -0.86
CKAP4-202ENST00000552828 STUMQ69YW2 141 aa9.69□□□□□ -0.86
CKAP4-202ENST00000552828 SLC35E4Q6ICL7 350 aa9.69□□□□□ -0.86
CKAP4-202ENST00000552828 Q6ZSR3 168 aa9.69□□□□□ -0.86
CKAP4-202ENST00000552828 KCTD8Q6ZWB6 473 aa9.69□□□□□ -0.86
CKAP4-202ENST00000552828 MOB3CQ70IA8 216 aa9.69□□□□□ -0.86
CKAP4-202ENST00000552828 STX19Q8N4C7 294 aa9.69□□□□□ -0.86
CKAP4-202ENST00000552828 FAM216BQ8N7L0 139 aa9.69□□□□□ -0.86
CKAP4-202ENST00000552828 RNF170Q96K19 258 aa9.69□□□□□ -0.86
CKAP4-202ENST00000552828 MRPS26Q9BYN8 205 aaKnown RBP9.69□□□□□ -0.86
CKAP4-202ENST00000552828 ANKRD60Q9BZ19 345 aa9.69□□□□□ -0.86
CKAP4-202ENST00000552828 PPP1R3EQ9H7J1 279 aa9.69□□□□□ -0.86
CKAP4-202ENST00000552828 PLEKHA1Q9HB21 404 aa9.69□□□□□ -0.86
CKAP4-202ENST00000552828 SCN3BQ9NY72 215 aa9.69□□□□□ -0.86
CKAP4-202ENST00000552828 PSORS1C1Q9UIG5 152 aa9.69□□□□□ -0.86
CKAP4-202ENST00000552828 LOC107986453A0A1B0GWG9 222 aa9.68□□□□□ -0.86
CKAP4-202ENST00000552828 H3BSH0 61 aa9.68□□□□□ -0.86
CKAP4-202ENST00000552828 NRASP01111 189 aa9.68□□□□□ -0.86
CKAP4-202ENST00000552828 ISG15P05161 165 aa9.68□□□□□ -0.86
CKAP4-202ENST00000552828 CCDC159P0C7I6 412 aa9.68□□□□□ -0.86
CKAP4-202ENST00000552828 RPL5P46777 297 aaKnown RBP9.68□□□□□ -0.86
CKAP4-202ENST00000552828 ACSM1Q08AH1 577 aa9.68□□□□□ -0.86
CKAP4-202ENST00000552828 DYNC1I2Q13409 638 aaKnown RBP9.68□□□□□ -0.86
CKAP4-202ENST00000552828 BEAN1Q3B7T3 259 aa9.68□□□□□ -0.86
CKAP4-202ENST00000552828 CEACAM21Q3KPI0 293 aa9.68□□□□□ -0.86
CKAP4-202ENST00000552828 LRRC10Q5BKY1 277 aa9.68□□□□□ -0.86
CKAP4-202ENST00000552828 FAM76BQ5HYJ3 339 aa9.68□□□□□ -0.86
CKAP4-202ENST00000552828 CEP78Q5JTW2 689 aa9.68□□□□□ -0.86
CKAP4-202ENST00000552828 PLCXD3Q63HM9 321 aa9.68□□□□□ -0.86
CKAP4-202ENST00000552828 AHSA2Q719I0 299 aa9.68□□□□□ -0.86
CKAP4-202ENST00000552828 RDH10Q8IZV5 341 aa9.68□□□□□ -0.86
CKAP4-202ENST00000552828 ZNF676Q8N7Q3 588 aa9.68□□□□□ -0.86
CKAP4-202ENST00000552828 OR5A2Q8NGI9 324 aa9.68□□□□□ -0.86
CKAP4-202ENST00000552828 OR10Z1Q8NGY1 313 aa9.68□□□□□ -0.86
CKAP4-202ENST00000552828 C10orf35Q96D05 121 aa9.68□□□□□ -0.86
CKAP4-202ENST00000552828 SEH1LQ96EE3 360 aa9.68□□□□□ -0.86
CKAP4-202ENST00000552828 VCX3AQ9NNX9 186 aa9.68□□□□□ -0.86
CKAP4-202ENST00000552828 SIRT7Q9NRC8 400 aa9.68□□□□□ -0.86
CKAP4-202ENST00000552828 HHLA2Q9UM44 414 aa9.68□□□□□ -0.86
CKAP4-202ENST00000552828 TRBV2A0A0J9YWF9 115 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 A6NIN4 97 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 OR5B21A6NL26 309 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 OR4C45A6NMZ5 311 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 ZNF732B4DXR9 585 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 PTGES3LE9PB15 166 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 E9PI62 339 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 M0R1W7 72 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 CDIPTO14735 213 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 SERPINA3P01011 423 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 OPN1MWP04001 364 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 SMIM18P0DKX4 95 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 OPN1MW2P0DN77 364 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 OPN1MW3P0DN78 364 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 SAA4P35542 130 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 GPM6AP51674 278 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 GNG3P63215 75 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 IKZF1Q13422 519 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 HERPUD1Q15011 391 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 CNPY1Q3B7I2 92 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 CCDC58Q4VC31 144 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 OR2G6Q5TZ20 316 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 NCR3LG1Q68D85 454 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 TMEM42Q69YG0 159 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 RPL22L1Q6P5R6 122 aaKnown RBP9.67□□□□□ -0.86
CKAP4-202ENST00000552828 C11orf88Q6PI97 169 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 ZNF788Q6ZQV5 615 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 BEND2Q8NDZ0 799 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 OR52N1Q8NH53 320 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 HPSE2Q8WWQ2 592 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 CFHR4Q92496 578 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 MYDGFQ969H8 173 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 COMMD4Q9H0A8 199 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 METTL8Q9H825 291 aaKnown RBP9.67□□□□□ -0.86
CKAP4-202ENST00000552828 FKBP14Q9NWM8 211 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 BABAM2Q9NXR7 383 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 CLEC2DQ9UHP7 191 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 TPRKBQ9Y3C4 175 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 NBEAL2Q6ZNJ1 2754 aa9.67□□□□□ -0.86
CKAP4-202ENST00000552828 MEIOCA2RUB1 952 aa9.66□□□□□ -0.86
CKAP4-202ENST00000552828 ANKRD61A6NGH8 418 aa9.66□□□□□ -0.86
CKAP4-202ENST00000552828 TMEM212A6NML5 194 aa9.66□□□□□ -0.86
CKAP4-202ENST00000552828 G3V4G9 280 aa9.66□□□□□ -0.86
CKAP4-202ENST00000552828 SLC1A7O00341 560 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms