RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 PKIBQ9C010 78 aa11.34□□□□□ -0.59
CHMP1A-210ENST00000551981 TMEM133Q9H2Q1 129 aa11.34□□□□□ -0.59
CHMP1A-210ENST00000551981 MOB1AQ9H8S9 216 aa11.34□□□□□ -0.59
CHMP1A-210ENST00000551981 DNAJB9Q9UBS3 223 aa11.34□□□□□ -0.59
CHMP1A-210ENST00000551981 ZMAT5Q9UDW3 170 aaKnown RBP11.34□□□□□ -0.59
CHMP1A-210ENST00000551981 TAGLN3Q9UI15 199 aa11.34□□□□□ -0.59
CHMP1A-210ENST00000551981 GTF2A1LQ9UNN4 478 aa11.34□□□□□ -0.59
CHMP1A-210ENST00000551981 LINC00312Q9Y6C7 94 aa11.34□□□□□ -0.59
CHMP1A-210ENST00000551981 TMEM14AQ9Y6G1 99 aa11.34□□□□□ -0.59
CHMP1A-210ENST00000551981 ARRDC5A6NEK1 342 aa11.33□□□□□ -0.6
CHMP1A-210ENST00000551981 E2F6O75461 281 aa11.33□□□□□ -0.6
CHMP1A-210ENST00000551981 LPLP06858 475 aa11.33□□□□□ -0.6
CHMP1A-210ENST00000551981 ROM1Q03395 351 aa11.33□□□□□ -0.6
CHMP1A-210ENST00000551981 EDDM3AQ14507 147 aa11.33□□□□□ -0.6
CHMP1A-210ENST00000551981 ABCA11PQ4W5N1 156 aa11.33□□□□□ -0.6
CHMP1A-210ENST00000551981 BCL2L15Q5TBC7 163 aa11.33□□□□□ -0.6
CHMP1A-210ENST00000551981 BBS1Q8NFJ9 593 aa11.33□□□□□ -0.6
CHMP1A-210ENST00000551981 SNX22Q96L94 193 aa11.33□□□□□ -0.6
CHMP1A-210ENST00000551981 SLC25A33Q9BSK2 321 aa11.33□□□□□ -0.6
CHMP1A-210ENST00000551981 MCRIP2Q9BUT9 160 aaKnown RBP11.33□□□□□ -0.6
CHMP1A-210ENST00000551981 CHID1Q9BWS9 393 aa11.33□□□□□ -0.6
CHMP1A-210ENST00000551981 IKZF2Q9UKS7 526 aa11.33□□□□□ -0.6
CHMP1A-210ENST00000551981 TCRBV5S2A0A599 114 aa11.32□□□□□ -0.6
CHMP1A-210ENST00000551981 DHRS7CA6NNS2 312 aa11.32□□□□□ -0.6
CHMP1A-210ENST00000551981 OR2F2O95006 317 aa11.32□□□□□ -0.6
CHMP1A-210ENST00000551981 TTRP02766 147 aa11.32□□□□□ -0.6
CHMP1A-210ENST00000551981 MRPL3P09001 348 aaKnown RBP11.32□□□□□ -0.6
CHMP1A-210ENST00000551981 NHLRC4P0CG21 123 aaPredicted RBP11.32□□□□□ -0.6
CHMP1A-210ENST00000551981 SLC2A5P22732 501 aa11.32□□□□□ -0.6
CHMP1A-210ENST00000551981 PEX2P28328 305 aa11.32□□□□□ -0.6
CHMP1A-210ENST00000551981 MFGE8Q08431 387 aaPredicted RBP11.32□□□□□ -0.6
CHMP1A-210ENST00000551981 APOFQ13790 326 aa11.32□□□□□ -0.6
CHMP1A-210ENST00000551981 SLX4IPQ5VYV7 408 aa11.32□□□□□ -0.6
CHMP1A-210ENST00000551981 TCF23Q7RTU1 214 aa11.32□□□□□ -0.6
CHMP1A-210ENST00000551981 ANGPTL5Q86XS5 388 aa11.32□□□□□ -0.6
CHMP1A-210ENST00000551981 CEP19Q96LK0 163 aa11.32□□□□□ -0.6
CHMP1A-210ENST00000551981 ZNF649Q9BS31 505 aa11.32□□□□□ -0.6
CHMP1A-210ENST00000551981 ZNF556Q9HAH1 456 aa11.32□□□□□ -0.6
CHMP1A-210ENST00000551981 DPM3Q9P2X0 92 aa11.32□□□□□ -0.6
CHMP1A-210ENST00000551981 SLC7A11Q9UPY5 501 aa11.32□□□□□ -0.6
CHMP1A-210ENST00000551981 V9GYS6 101 aa11.32□□□□□ -0.6
CHMP1A-210ENST00000551981 FAM230AA0A1W2PPH8 454 aa11.31□□□□□ -0.6
CHMP1A-210ENST00000551981 LOC110117498-PIK3R3F6TDL0 507 aa11.31□□□□□ -0.6
CHMP1A-210ENST00000551981 M0QZK8 103 aa11.31□□□□□ -0.6
CHMP1A-210ENST00000551981 CD24P25063 80 aa11.31□□□□□ -0.6
CHMP1A-210ENST00000551981 MNAT1P51948 309 aa11.31□□□□□ -0.6
CHMP1A-210ENST00000551981 ACTR3P61158 418 aa11.31□□□□□ -0.6
CHMP1A-210ENST00000551981 GRK1Q15835 563 aa11.31□□□□□ -0.6
CHMP1A-210ENST00000551981 OR52W1Q6IF63 320 aa11.31□□□□□ -0.6
CHMP1A-210ENST00000551981 UNQ9370/PRO34162Q6UXP9 181 aa11.31□□□□□ -0.6
CHMP1A-210ENST00000551981 RNF144BQ7Z419 303 aa11.31□□□□□ -0.6
CHMP1A-210ENST00000551981 TRAPPC6BQ86SZ2 158 aa11.31□□□□□ -0.6
CHMP1A-210ENST00000551981 RTN4RL2Q86UN3 420 aa11.31□□□□□ -0.6
CHMP1A-210ENST00000551981 DHFR2Q86XF0 187 aa11.31□□□□□ -0.6
CHMP1A-210ENST00000551981 MRPL41Q8IXM3 137 aaKnown RBP11.31□□□□□ -0.6
CHMP1A-210ENST00000551981 OSR2Q8N2R0 312 aa11.31□□□□□ -0.6
CHMP1A-210ENST00000551981 OR4P4Q8NGL7 312 aa11.31□□□□□ -0.6
CHMP1A-210ENST00000551981 TRMT10AQ8TBZ6 339 aaKnown RBP11.31□□□□□ -0.6
CHMP1A-210ENST00000551981 ZNF596Q8TC21 504 aa11.31□□□□□ -0.6
CHMP1A-210ENST00000551981 RBM14Q96PK6 669 aaKnown RBP11.31□□□□□ -0.6
CHMP1A-210ENST00000551981 TTTY10Q9BZA0 68 aa11.31□□□□□ -0.6
CHMP1A-210ENST00000551981 FAM107BQ9H098 131 aa11.31□□□□□ -0.6
CHMP1A-210ENST00000551981 PAPOLBQ9NRJ5 636 aaKnown RBP11.31□□□□□ -0.6
CHMP1A-210ENST00000551981 STAB2Q8WWQ8 2551 aa11.3□□□□□ -0.6
CHMP1A-210ENST00000551981 TMEM82A0PJX8 343 aa11.3□□□□□ -0.6
CHMP1A-210ENST00000551981 A6NIN4 97 aa11.3□□□□□ -0.6
CHMP1A-210ENST00000551981 LEUTXA8MZ59 168 aa11.3□□□□□ -0.6
CHMP1A-210ENST00000551981 PRR32B1ATL7 298 aa11.3□□□□□ -0.6
CHMP1A-210ENST00000551981 RAP2AP10114 183 aa11.3□□□□□ -0.6
CHMP1A-210ENST00000551981 OSMP13725 252 aa11.3□□□□□ -0.6
CHMP1A-210ENST00000551981 GABRR1P24046 479 aa11.3□□□□□ -0.6
CHMP1A-210ENST00000551981 CDK5Q00535 292 aa11.3□□□□□ -0.6
CHMP1A-210ENST00000551981 BDH1Q02338 343 aa11.3□□□□□ -0.6
CHMP1A-210ENST00000551981 C9orf152Q5JTZ5 239 aa11.3□□□□□ -0.6
CHMP1A-210ENST00000551981 EGFL6Q8IUX8 553 aa11.3□□□□□ -0.6
CHMP1A-210ENST00000551981 ENTHD1Q8IYW4 607 aa11.3□□□□□ -0.6
CHMP1A-210ENST00000551981 ELMOD2Q8IZ81 293 aa11.3□□□□□ -0.6
CHMP1A-210ENST00000551981 ABHD12Q8N2K0 398 aa11.3□□□□□ -0.6
CHMP1A-210ENST00000551981 TPRX1Q8N7U7 411 aa11.3□□□□□ -0.6
CHMP1A-210ENST00000551981 OR14K1Q8NGZ2 314 aa11.3□□□□□ -0.6
CHMP1A-210ENST00000551981 BCAS4Q8TDM0 211 aa11.3□□□□□ -0.6
CHMP1A-210ENST00000551981 CREB3L1Q96BA8 519 aa11.3□□□□□ -0.6
CHMP1A-210ENST00000551981 CNN2Q99439 309 aaKnown RBP11.3□□□□□ -0.6
CHMP1A-210ENST00000551981 CADM1Q9BY67 442 aaKnown RBP11.3□□□□□ -0.6
CHMP1A-210ENST00000551981 GAL3ST2Q9H3Q3 398 aa11.3□□□□□ -0.6
CHMP1A-210ENST00000551981 PLEKHA1Q9HB21 404 aa11.3□□□□□ -0.6
CHMP1A-210ENST00000551981 ARL8BQ9NVJ2 186 aa11.3□□□□□ -0.6
CHMP1A-210ENST00000551981 MTCH1Q9NZJ7 389 aa11.3□□□□□ -0.6
CHMP1A-210ENST00000551981 GLS2Q9UI32 602 aa11.3□□□□□ -0.6
CHMP1A-210ENST00000551981 OR52A1Q9UKL2 312 aa11.3□□□□□ -0.6
CHMP1A-210ENST00000551981 UBE2J1Q9Y385 318 aaPredicted RBP11.3□□□□□ -0.6
CHMP1A-210ENST00000551981 PCDHGB5Q9Y5G0 923 aa11.3□□□□□ -0.6
CHMP1A-210ENST00000551981 SNX5Q9Y5X3 404 aa11.3□□□□□ -0.6
CHMP1A-210ENST00000551981 R4GMQ9 66 aa11.3□□□□□ -0.6
CHMP1A-210ENST00000551981 PSMB11A5LHX3 300 aa11.29□□□□□ -0.6
CHMP1A-210ENST00000551981 F8VVB4 439 aa11.29□□□□□ -0.6
CHMP1A-210ENST00000551981 F8VWA3 439 aa11.29□□□□□ -0.6
CHMP1A-210ENST00000551981 GNGT2O14610 69 aa11.29□□□□□ -0.6
CHMP1A-210ENST00000551981 SNX3O60493 162 aa11.29□□□□□ -0.6
CHMP1A-210ENST00000551981 HAND1O96004 215 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms