RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 MARCOQ9UEW3 520 aaPredicted RBP1.69□□□□□ -2.14
PTCH1-223ENST00000551623 BTNL2Q9UIR0 455 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 KIAA2026Q5HYC2 2103 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 MYCBP2O75592 4640 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 KMT2AQ03164 3969 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 FLG2Q5D862 2391 aaPredicted RBP1.68□□□□□ -2.14
PTCH1-223ENST00000551623 IGHV3OR15-7A0A075B7D8 119 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 A0A087X0M5 115 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 IGHV2-26A0A0B4J1V2 119 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 TEX13CA0A0J9YWL9 993 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 A0A1B0GX30 115 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 A0A1W2PRG6 482 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 HTR3EA5X5Y0 456 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 OR2AT4A6NND4 320 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 SERPINE3A8MV23 424 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 EPM2AB3EWF7 344 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 C11orf98E9PRG8 122 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 LY6LH3BQJ8 138 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 LGALS9O00182 355 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 BHLHE40O14503 412 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 AZIN1O14977 448 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 CFLARO15519 480 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 RNF13O43567 381 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 MTRF1O75570 445 aaKnown RBP1.68□□□□□ -2.14
PTCH1-223ENST00000551623 RGS11O94810 467 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 CH25HO95992 272 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 ARG1P05089 322 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 GSTA1P08263 222 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 ACSM4P0C7M7 580 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 ZNF728P0DKX0 622 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 NR2F1P10589 423 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 CTLA4P16410 223 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 HTR1DP28221 377 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 SOAT1P35610 550 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 CHI3L1P36222 383 aaPredicted RBP1.68□□□□□ -2.14
PTCH1-223ENST00000551623 POU3F4P49335 361 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 FUT6P51993 359 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 ARHGDIBP52566 201 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 RAB25P57735 213 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 RPL31P62899 125 aaKnown RBP1.68□□□□□ -2.14
PTCH1-223ENST00000551623 HOXC5Q00444 222 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 DR1Q01658 176 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 EMX2Q04743 252 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 ECH1Q13011 328 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 MAD2L1Q13257 205 aaPredicted RBP1.68□□□□□ -2.14
PTCH1-223ENST00000551623 GPR50Q13585 617 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 ALKBH1Q13686 389 aaKnown RBP1.68□□□□□ -2.14
PTCH1-223ENST00000551623 ZNF273Q14593 569 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 SNAPC1Q16533 368 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 SGCAQ16586 387 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 ANKDD1AQ495B1 522 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 CCDC92Q53HC0 331 aaPredicted RBP1.68□□□□□ -2.14
PTCH1-223ENST00000551623 CFAP157Q5JU67 520 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 GPR139Q6DWJ6 353 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 OR4F3Q6IEY1 312 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 ZYG11AQ6WRX3 759 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 ACP7Q6ZNF0 438 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 ZBTB49Q6ZSB9 765 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 PGAP1Q75T13 922 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 TCF23Q7RTU1 214 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 NANOGNBQ7Z5D8 188 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 SLC35E3Q7Z769 313 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 DHDDSQ86SQ9 333 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 TGIF2LXQ8IUE1 241 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 FOXRED2Q8IWF2 684 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 SLC30A8Q8IWU4 369 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 TRIML2Q8N7C3 387 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 ZNF491Q8N8L2 437 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 SETD9Q8NE22 299 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 OR1M1Q8NGA1 313 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 OR4A15Q8NGL6 344 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 OR1N2Q8NGR9 330 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 OR2K2Q8NGT1 345 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 ACMSDQ8TDX5 336 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 AENQ8WTP8 325 aaKnown RBP1.68□□□□□ -2.14
PTCH1-223ENST00000551623 PHLDA1Q8WV24 401 aaPredicted RBP1.68□□□□□ -2.14
PTCH1-223ENST00000551623 LRRC29Q8WV35 223 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 SECTM1Q8WVN6 248 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 H1FXQ92522 213 aaKnown RBP1.68□□□□□ -2.14
PTCH1-223ENST00000551623 SLC7A6Q92536 515 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 DCUN1D4Q92564 292 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 DLX4Q92988 240 aaPredicted RBP1.68□□□□□ -2.14
PTCH1-223ENST00000551623 ITFG2Q969R8 447 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 CREB3L1Q96BA8 519 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 RNF183Q96D59 192 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 SEH1LQ96EE3 360 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 SGTBQ96EQ0 304 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 NAPGQ99747 312 aaPredicted RBP1.68□□□□□ -2.14
PTCH1-223ENST00000551623 ERP44Q9BS26 406 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 SLC35A5Q9BS91 424 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 ABCG5Q9H222 651 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 RABEP2Q9H5N1 569 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 IKZF5Q9H5V7 419 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 PLEKHA2Q9HB19 425 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 MEPEQ9NQ76 525 aaPredicted RBP1.68□□□□□ -2.14
PTCH1-223ENST00000551623 PCDHB16Q9NRJ7 776 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 INIPQ9NRY2 104 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 THAP1Q9NVV9 213 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 NDE1Q9NXR1 346 aa1.68□□□□□ -2.14
PTCH1-223ENST00000551623 PTTG3PQ9NZH4 202 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms