RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 CCDC54Q8NEL0 328 aa10.6□□□□□ -0.71
NPAS3-209ENST00000551008 LINC01006Q8NI28 216 aa10.6□□□□□ -0.71
NPAS3-209ENST00000551008 TBC1D15Q8TC07 691 aa10.6□□□□□ -0.71
NPAS3-209ENST00000551008 C10orf35Q96D05 121 aa10.6□□□□□ -0.71
NPAS3-209ENST00000551008 CEP19Q96LK0 163 aa10.6□□□□□ -0.71
NPAS3-209ENST00000551008 AMBNQ9NP70 447 aa10.6□□□□□ -0.71
NPAS3-209ENST00000551008 GMPPBQ9Y5P6 360 aa10.6□□□□□ -0.71
NPAS3-209ENST00000551008 NOTCH1P46531 2555 aa10.6□□□□□ -0.71
NPAS3-209ENST00000551008 DAPL1A0PJW8 107 aa10.59□□□□□ -0.71
NPAS3-209ENST00000551008 MEIOCA2RUB1 952 aa10.59□□□□□ -0.71
NPAS3-209ENST00000551008 CLPSL1A2RUU4 121 aa10.59□□□□□ -0.71
NPAS3-209ENST00000551008 SLC1A7O00341 560 aa10.59□□□□□ -0.71
NPAS3-209ENST00000551008 ANGPTL7O43827 346 aa10.59□□□□□ -0.71
NPAS3-209ENST00000551008 WBP4O75554 376 aaKnown RBP10.59□□□□□ -0.71
NPAS3-209ENST00000551008 GATBO75879 557 aaKnown RBP10.59□□□□□ -0.71
NPAS3-209ENST00000551008 INMTO95050 263 aa10.59□□□□□ -0.71
NPAS3-209ENST00000551008 PIPP12273 146 aaPredicted RBP10.59□□□□□ -0.71
NPAS3-209ENST00000551008 ATF1P18846 271 aa10.59□□□□□ -0.71
NPAS3-209ENST00000551008 CCR9P51686 369 aa10.59□□□□□ -0.71
NPAS3-209ENST00000551008 ACSM1Q08AH1 577 aa10.59□□□□□ -0.71
NPAS3-209ENST00000551008 GALEQ14376 348 aa10.59□□□□□ -0.71
NPAS3-209ENST00000551008 TMEM244Q5VVB8 128 aa10.59□□□□□ -0.71
NPAS3-209ENST00000551008 OLFML2AQ68BL7 652 aa10.59□□□□□ -0.71
NPAS3-209ENST00000551008 ASPHD2Q6ICH7 369 aa10.59□□□□□ -0.71
NPAS3-209ENST00000551008 LHFPL3Q86UP9 236 aa10.59□□□□□ -0.71
NPAS3-209ENST00000551008 DYNAPQ8N1N2 210 aa10.59□□□□□ -0.71
NPAS3-209ENST00000551008 ZSCAN4Q8NAM6 433 aaPredicted RBP10.59□□□□□ -0.71
NPAS3-209ENST00000551008 BEND2Q8NDZ0 799 aa10.59□□□□□ -0.71
NPAS3-209ENST00000551008 DNAAF1Q8NEP3 725 aa10.59□□□□□ -0.71
NPAS3-209ENST00000551008 OR52N4Q8NGI2 321 aa10.59□□□□□ -0.71
NPAS3-209ENST00000551008 OR52I1Q8NGK6 324 aa10.59□□□□□ -0.71
NPAS3-209ENST00000551008 OR4F5Q8NH21 305 aa10.59□□□□□ -0.71
NPAS3-209ENST00000551008 PP6455Q8WZ26 134 aa10.59□□□□□ -0.71
NPAS3-209ENST00000551008 FGGYQ96C11 551 aa10.59□□□□□ -0.71
NPAS3-209ENST00000551008 CITED1Q99966 193 aa10.59□□□□□ -0.71
NPAS3-209ENST00000551008 C9orf16Q9BUW7 83 aa10.59□□□□□ -0.71
NPAS3-209ENST00000551008 ALG8Q9BVK2 526 aa10.59□□□□□ -0.71
NPAS3-209ENST00000551008 FAM234AQ9H0X4 552 aa10.59□□□□□ -0.71
NPAS3-209ENST00000551008 MRPS18AQ9NVS2 196 aaKnown RBP10.59□□□□□ -0.71
NPAS3-209ENST00000551008 RBFOX1Q9NWB1 397 aaKnown RBP10.59□□□□□ -0.71
NPAS3-209ENST00000551008 FAM118AQ9NWS6 357 aa10.59□□□□□ -0.71
NPAS3-209ENST00000551008 VPREB3Q9UKI3 123 aa10.59□□□□□ -0.71
NPAS3-209ENST00000551008 SLC7A11Q9UPY5 501 aa10.59□□□□□ -0.71
NPAS3-209ENST00000551008 ORC6Q9Y5N6 252 aa10.59□□□□□ -0.71
NPAS3-209ENST00000551008 LOC100130705A0A1B0GUX0 176 aa10.58□□□□□ -0.72
NPAS3-209ENST00000551008 C17orf98A8MV24 154 aa10.58□□□□□ -0.72
NPAS3-209ENST00000551008 H0YAE9 185 aa10.58□□□□□ -0.72
NPAS3-209ENST00000551008 J3QLW9 94 aa10.58□□□□□ -0.72
NPAS3-209ENST00000551008 PSPNO60542 156 aa10.58□□□□□ -0.72
NPAS3-209ENST00000551008 HTR1AP08908 422 aa10.58□□□□□ -0.72
NPAS3-209ENST00000551008 CALCBP10092 127 aa10.58□□□□□ -0.72
NPAS3-209ENST00000551008 ZNF19P17023 458 aa10.58□□□□□ -0.72
NPAS3-209ENST00000551008 BCL3P20749 454 aa10.58□□□□□ -0.72
NPAS3-209ENST00000551008 EEF1B2P24534 225 aaKnown RBP10.58□□□□□ -0.72
NPAS3-209ENST00000551008 AZGP1P25311 298 aaKnown RBP10.58□□□□□ -0.72
NPAS3-209ENST00000551008 ALKBH1Q13686 389 aaKnown RBP10.58□□□□□ -0.72
NPAS3-209ENST00000551008 SMN1Q16637 294 aaKnown RBP10.58□□□□□ -0.72
NPAS3-209ENST00000551008 ZNF782Q6ZMW2 699 aaPredicted RBP10.58□□□□□ -0.72
NPAS3-209ENST00000551008 KCTD20Q7Z5Y7 419 aa10.58□□□□□ -0.72
NPAS3-209ENST00000551008 OR5D13Q8NGL4 314 aa10.58□□□□□ -0.72
NPAS3-209ENST00000551008 PIFOQ8TCI5 191 aa10.58□□□□□ -0.72
NPAS3-209ENST00000551008 RGP1Q92546 391 aaPredicted RBP10.58□□□□□ -0.72
NPAS3-209ENST00000551008 RFT1Q96AA3 541 aa10.58□□□□□ -0.72
NPAS3-209ENST00000551008 BORCS8Q96FH0 119 aa10.58□□□□□ -0.72
NPAS3-209ENST00000551008 SPACA5Q96QH8 159 aa10.58□□□□□ -0.72
NPAS3-209ENST00000551008 SEBOXQ9HB31 216 aaPredicted RBP10.58□□□□□ -0.72
NPAS3-209ENST00000551008 ERVK13-1Q9NX77 482 aa10.58□□□□□ -0.72
NPAS3-209ENST00000551008 FAM96BQ9Y3D0 163 aa10.58□□□□□ -0.72
NPAS3-209ENST00000551008 TRBV2A0A0J9YWF9 115 aa10.57□□□□□ -0.72
NPAS3-209ENST00000551008 A0A1B0GUS0 222 aa10.57□□□□□ -0.72
NPAS3-209ENST00000551008 FAM90A8PA6NJQ4 464 aa10.57□□□□□ -0.72
NPAS3-209ENST00000551008 ODF3BA8MYP8 253 aa10.57□□□□□ -0.72
NPAS3-209ENST00000551008 CLPXO76031 633 aa10.57□□□□□ -0.72
NPAS3-209ENST00000551008 ZFPL1O95159 310 aa10.57□□□□□ -0.72
NPAS3-209ENST00000551008 CRYBA1P05813 215 aa10.57□□□□□ -0.72
NPAS3-209ENST00000551008 LIMS3P0CW19 117 aa10.57□□□□□ -0.72
NPAS3-209ENST00000551008 LIMS4P0CW20 117 aa10.57□□□□□ -0.72
NPAS3-209ENST00000551008 COX7A1P24310 79 aa10.57□□□□□ -0.72
NPAS3-209ENST00000551008 DUSP1P28562 367 aa10.57□□□□□ -0.72
NPAS3-209ENST00000551008 POU3F4P49335 361 aa10.57□□□□□ -0.72
NPAS3-209ENST00000551008 RBP2P50120 134 aa10.57□□□□□ -0.72
NPAS3-209ENST00000551008 CNN3Q15417 329 aaKnown RBP10.57□□□□□ -0.72
NPAS3-209ENST00000551008 MIDNQ504T8 468 aa10.57□□□□□ -0.72
NPAS3-209ENST00000551008 XAF1Q6GPH4 301 aa10.57□□□□□ -0.72
NPAS3-209ENST00000551008 ZBTB49Q6ZSB9 765 aa10.57□□□□□ -0.72
NPAS3-209ENST00000551008 LHFPL4Q7Z7J7 247 aa10.57□□□□□ -0.72
NPAS3-209ENST00000551008 EGFL6Q8IUX8 553 aa10.57□□□□□ -0.72
NPAS3-209ENST00000551008 OR8H2Q8N162 312 aa10.57□□□□□ -0.72
NPAS3-209ENST00000551008 SYS1Q8N2H4 156 aa10.57□□□□□ -0.72
NPAS3-209ENST00000551008 ASCC1Q8N9N2 400 aaKnown RBP10.57□□□□□ -0.72
NPAS3-209ENST00000551008 PPP1R35Q8TAP8 253 aa10.57□□□□□ -0.72
NPAS3-209ENST00000551008 RPS4Y2Q8TD47 263 aa10.57□□□□□ -0.72
NPAS3-209ENST00000551008 EMG1Q92979 244 aaKnown RBP10.57□□□□□ -0.72
NPAS3-209ENST00000551008 ADI1Q9BV57 179 aa10.57□□□□□ -0.72
NPAS3-209ENST00000551008 MEGF9Q9H1U4 602 aa10.57□□□□□ -0.72
NPAS3-209ENST00000551008 DPAGT1Q9H3H5 408 aa10.57□□□□□ -0.72
NPAS3-209ENST00000551008 C16orf95Q9H693 158 aa10.57□□□□□ -0.72
NPAS3-209ENST00000551008 BEX1Q9HBH7 125 aa10.57□□□□□ -0.72
NPAS3-209ENST00000551008 HHLA2Q9UM44 414 aa10.57□□□□□ -0.72
NPAS3-209ENST00000551008 SF3B6Q9Y3B4 125 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 187.5 ms