RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 FAM83EQ2M2I3 478 aa2.98□□□□□ -1.93
LIMA1-205ENST00000550592 CHRFAM7AQ494W8 412 aa2.98□□□□□ -1.93
LIMA1-205ENST00000550592 AP1ARQ63HQ0 302 aa2.98□□□□□ -1.93
LIMA1-205ENST00000550592 STUMQ69YW2 141 aa2.98□□□□□ -1.93
LIMA1-205ENST00000550592 CEMP1Q6PRD7 247 aaPredicted RBP2.98□□□□□ -1.93
LIMA1-205ENST00000550592 PLET1Q6UQ28 207 aa2.98□□□□□ -1.93
LIMA1-205ENST00000550592 MICU2Q8IYU8 434 aa2.98□□□□□ -1.93
LIMA1-205ENST00000550592 CYB561D1Q8N8Q1 229 aa2.98□□□□□ -1.93
LIMA1-205ENST00000550592 BPIFCQ8NFQ6 507 aa2.98□□□□□ -1.93
LIMA1-205ENST00000550592 TMEM230Q96A57 120 aa2.98□□□□□ -1.93
LIMA1-205ENST00000550592 TMA16Q96EY4 203 aaKnown RBP2.98□□□□□ -1.93
LIMA1-205ENST00000550592 TCEAL2Q9H3H9 227 aaPredicted RBP2.98□□□□□ -1.93
LIMA1-205ENST00000550592 CCNB1IP1Q9NPC3 277 aa2.98□□□□□ -1.93
LIMA1-205ENST00000550592 DUX4Q9UBX2 424 aa2.98□□□□□ -1.93
LIMA1-205ENST00000550592 KMT2CQ8NEZ4 4911 aaKnown RBP2.98□□□□□ -1.93
LIMA1-205ENST00000550592 ABCA1O95477 2261 aa2.98□□□□□ -1.93
LIMA1-205ENST00000550592 CADP27708 2225 aa2.97□□□□□ -1.93
LIMA1-205ENST00000550592 H0YIV9 168 aa2.97□□□□□ -1.93
LIMA1-205ENST00000550592 TEX46H3BTG2 121 aa2.97□□□□□ -1.93
LIMA1-205ENST00000550592 K7EMT4 169 aa2.97□□□□□ -1.93
LIMA1-205ENST00000550592 RAD51CO43502 376 aa2.97□□□□□ -1.93
LIMA1-205ENST00000550592 MED6O75586 246 aa2.97□□□□□ -1.93
LIMA1-205ENST00000550592 SLC25A14O95258 325 aaPredicted RBP2.97□□□□□ -1.93
LIMA1-205ENST00000550592 ZNF32P17041 273 aa2.97□□□□□ -1.93
LIMA1-205ENST00000550592 MSNP26038 577 aaKnown RBP2.97□□□□□ -1.93
LIMA1-205ENST00000550592 KRTAP5-9P26371 169 aa2.97□□□□□ -1.93
LIMA1-205ENST00000550592 PFN3P60673 137 aa2.97□□□□□ -1.93
LIMA1-205ENST00000550592 ESRRGP62508 458 aa2.97□□□□□ -1.93
LIMA1-205ENST00000550592 RAP1AP62834 184 aa2.97□□□□□ -1.93
LIMA1-205ENST00000550592 CDH17Q12864 832 aa2.97□□□□□ -1.93
LIMA1-205ENST00000550592 IFT88Q13099 833 aa2.97□□□□□ -1.93
LIMA1-205ENST00000550592 GPR107Q5VW38 600 aa2.97□□□□□ -1.93
LIMA1-205ENST00000550592 METTL21CQ5VZV1 264 aa2.97□□□□□ -1.93
LIMA1-205ENST00000550592 Q6ZR03 302 aa2.97□□□□□ -1.93
LIMA1-205ENST00000550592 PRSS58Q8IYP2 241 aa2.97□□□□□ -1.93
LIMA1-205ENST00000550592 KATNAL2Q8IYT4 538 aa2.97□□□□□ -1.93
LIMA1-205ENST00000550592 JAGN1Q8N5M9 183 aa2.97□□□□□ -1.93
LIMA1-205ENST00000550592 OR10G2Q8NGC3 310 aa2.97□□□□□ -1.93
LIMA1-205ENST00000550592 OR8D1Q8WZ84 308 aa2.97□□□□□ -1.93
LIMA1-205ENST00000550592 NTAN1Q96AB6 310 aa2.97□□□□□ -1.93
LIMA1-205ENST00000550592 TM4SF18Q96CE8 201 aa2.97□□□□□ -1.93
LIMA1-205ENST00000550592 UCK2Q9BZX2 261 aa2.97□□□□□ -1.93
LIMA1-205ENST00000550592 FBXO44Q9H4M3 255 aa2.97□□□□□ -1.93
LIMA1-205ENST00000550592 NCOR1P1Q9H4R4 102 aa2.97□□□□□ -1.93
LIMA1-205ENST00000550592 ASB7Q9H672 318 aa2.97□□□□□ -1.93
LIMA1-205ENST00000550592 LYRM4Q9HD34 91 aa2.97□□□□□ -1.93
LIMA1-205ENST00000550592 IL37Q9NZH6 218 aa2.97□□□□□ -1.93
LIMA1-205ENST00000550592 USF3Q68DE3 2245 aa2.97□□□□□ -1.93
LIMA1-205ENST00000550592 TET2Q6N021 2002 aaPredicted RBP2.97□□□□□ -1.93
LIMA1-205ENST00000550592 A0A1W2PP18 115 aa2.96□□□□□ -1.94
LIMA1-205ENST00000550592 FAM92AA1XBS5 289 aa2.96□□□□□ -1.94
LIMA1-205ENST00000550592 NCBP2LA6PVI3 153 aaKnown RBP2.96□□□□□ -1.94
LIMA1-205ENST00000550592 E7EWF7 191 aa2.96□□□□□ -1.94
LIMA1-205ENST00000550592 MAGEB4O15481 346 aaPredicted RBP2.96□□□□□ -1.94
LIMA1-205ENST00000550592 SLC37A4O43826 429 aa2.96□□□□□ -1.94
LIMA1-205ENST00000550592 ZNF324O75467 553 aaPredicted RBP2.96□□□□□ -1.94
LIMA1-205ENST00000550592 LSM8O95777 96 aaKnown RBP2.96□□□□□ -1.94
LIMA1-205ENST00000550592 CD3GP09693 182 aa2.96□□□□□ -1.94
LIMA1-205ENST00000550592 RAB3AP20336 220 aa2.96□□□□□ -1.94
LIMA1-205ENST00000550592 CSKP41240 450 aa2.96□□□□□ -1.94
LIMA1-205ENST00000550592 RPS5P46782 204 aaKnown RBP2.96□□□□□ -1.94
LIMA1-205ENST00000550592 PRR3P79522 188 aaKnown RBP2.96□□□□□ -1.94
LIMA1-205ENST00000550592 SLAQ13239 276 aa2.96□□□□□ -1.94
LIMA1-205ENST00000550592 RCAN2Q14206 197 aa2.96□□□□□ -1.94
LIMA1-205ENST00000550592 PTGES3Q15185 160 aaKnown RBP2.96□□□□□ -1.94
LIMA1-205ENST00000550592 BEX5Q5H9J7 111 aa2.96□□□□□ -1.94
LIMA1-205ENST00000550592 TPRG1LQ5T0D9 272 aa2.96□□□□□ -1.94
LIMA1-205ENST00000550592 NTM-AS1Q6ZSK4 140 aa2.96□□□□□ -1.94
LIMA1-205ENST00000550592 MBOAT2Q6ZWT7 520 aa2.96□□□□□ -1.94
LIMA1-205ENST00000550592 C8orf31Q8N9H6 132 aa2.96□□□□□ -1.94
LIMA1-205ENST00000550592 BBOF1Q8ND07 529 aa2.96□□□□□ -1.94
LIMA1-205ENST00000550592 OR10AD1Q8NGE0 317 aa2.96□□□□□ -1.94
LIMA1-205ENST00000550592 OR56A4Q8NGH8 313 aa2.96□□□□□ -1.94
LIMA1-205ENST00000550592 OR52E2Q8NGJ4 325 aa2.96□□□□□ -1.94
LIMA1-205ENST00000550592 AGR3Q8TD06 166 aa2.96□□□□□ -1.94
LIMA1-205ENST00000550592 CT55Q8WUE5 264 aa2.96□□□□□ -1.94
LIMA1-205ENST00000550592 STARD4Q96DR4 205 aa2.96□□□□□ -1.94
LIMA1-205ENST00000550592 TMEM38AQ9H6F2 299 aa2.96□□□□□ -1.94
LIMA1-205ENST00000550592 C12orf10Q9HB07 376 aa2.96□□□□□ -1.94
LIMA1-205ENST00000550592 PATZ1Q9HBE1 687 aaKnown RBP2.96□□□□□ -1.94
LIMA1-205ENST00000550592 HMG20AQ9NP66 347 aa2.96□□□□□ -1.94
LIMA1-205ENST00000550592 DYRK4Q9NR20 520 aa2.96□□□□□ -1.94
LIMA1-205ENST00000550592 ZNHIT6Q9NWK9 470 aaKnown RBP2.96□□□□□ -1.94
LIMA1-205ENST00000550592 CLN6Q9NWW5 311 aa2.96□□□□□ -1.94
LIMA1-205ENST00000550592 PDP1Q9P0J1 537 aaPredicted RBP2.96□□□□□ -1.94
LIMA1-205ENST00000550592 CTSFQ9UBX1 484 aa2.96□□□□□ -1.94
LIMA1-205ENST00000550592 FARSAQ9Y285 508 aaKnown RBP2.96□□□□□ -1.94
LIMA1-205ENST00000550592 VPS13CQ709C8 3753 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 IGKV2D-24A0A075B6R9 120 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 A6NDN8 102 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 GOLGA6L19H0YKK7 550 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 GOLGA8TH3BQL2 631 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 M0R3G1 203 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 RAD51BO15315 384 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 HCRTO43612 131 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 SLC19A2O60779 497 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 TNFP01375 233 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 HLA-HP01893 362 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 HBE1P02100 147 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 PRB2P02812 416 aaPredicted RBP2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms