RNA–Protein interactions for RNA: ENST00000550267.1

VPS29-208, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 810 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-208ENST00000550267 OR2F2O95006 317 aa8.3□□□□□ -1.08
VPS29-208ENST00000550267 COX4I1P13073 169 aa8.3□□□□□ -1.08
VPS29-208ENST00000550267 HAAOP46952 286 aa8.3□□□□□ -1.08
VPS29-208ENST00000550267 LUMP51884 338 aaPredicted RBP8.3□□□□□ -1.08
VPS29-208ENST00000550267 KCTD18Q6PI47 426 aaPredicted RBP8.3□□□□□ -1.08
VPS29-208ENST00000550267 RASSF6Q6ZTQ3 369 aa8.3□□□□□ -1.08
VPS29-208ENST00000550267 OR2W3Q7Z3T1 314 aa8.3□□□□□ -1.08
VPS29-208ENST00000550267 ZNF676Q8N7Q3 588 aa8.3□□□□□ -1.08
VPS29-208ENST00000550267 ASCC1Q8N9N2 400 aaKnown RBP8.3□□□□□ -1.08
VPS29-208ENST00000550267 Q8NFD4 153 aa8.3□□□□□ -1.08
VPS29-208ENST00000550267 RP9Q8TA86 221 aaKnown RBP8.3□□□□□ -1.08
VPS29-208ENST00000550267 THEM6Q8WUY1 208 aa8.3□□□□□ -1.08
VPS29-208ENST00000550267 STMN2Q93045 179 aa8.3□□□□□ -1.08
VPS29-208ENST00000550267 PYURFQ96I23 114 aa8.3□□□□□ -1.08
VPS29-208ENST00000550267 ZNF714Q96N38 554 aa8.3□□□□□ -1.08
VPS29-208ENST00000550267 RBM14Q96PK6 669 aaKnown RBP8.3□□□□□ -1.08
VPS29-208ENST00000550267 P2RX4Q99571 388 aa8.3□□□□□ -1.08
VPS29-208ENST00000550267 LYSTQ99698 3801 aa8.3□□□□□ -1.08
VPS29-208ENST00000550267 NRIP2Q9BQI9 281 aa8.3□□□□□ -1.08
VPS29-208ENST00000550267 BTBD10Q9BSF8 475 aa8.3□□□□□ -1.08
VPS29-208ENST00000550267 ARMC1Q9NVT9 282 aa8.3□□□□□ -1.08
VPS29-208ENST00000550267 VNN3Q9NY84 501 aa8.3□□□□□ -1.08
VPS29-208ENST00000550267 TAS2R1Q9NYW7 299 aa8.3□□□□□ -1.08
VPS29-208ENST00000550267 SLC22A13Q9Y226 551 aa8.3□□□□□ -1.08
VPS29-208ENST00000550267 SESN1Q9Y6P5 492 aa8.3□□□□□ -1.08
VPS29-208ENST00000550267 NOS1APO75052 506 aaPredicted RBP8.29□□□□□ -1.08
VPS29-208ENST00000550267 DNAJC8O75937 253 aaPredicted RBP8.29□□□□□ -1.08
VPS29-208ENST00000550267 SOX14O95416 240 aa8.29□□□□□ -1.08
VPS29-208ENST00000550267 LYNP07948 512 aa8.29□□□□□ -1.08
VPS29-208ENST00000550267 SNRNP70P08621 437 aaKnown RBP8.29□□□□□ -1.08
VPS29-208ENST00000550267 HTR1DP28221 377 aa8.29□□□□□ -1.08
VPS29-208ENST00000550267 RAB25P57735 213 aa8.29□□□□□ -1.08
VPS29-208ENST00000550267 IL18R1Q13478 541 aa8.29□□□□□ -1.08
VPS29-208ENST00000550267 EDDM3AQ14507 147 aa8.29□□□□□ -1.08
VPS29-208ENST00000550267 GDPD3Q7L5L3 318 aa8.29□□□□□ -1.08
VPS29-208ENST00000550267 COMMD2Q86X83 199 aa8.29□□□□□ -1.08
VPS29-208ENST00000550267 RNF148Q8N7C7 305 aa8.29□□□□□ -1.08
VPS29-208ENST00000550267 TPRX1Q8N7U7 411 aa8.29□□□□□ -1.08
VPS29-208ENST00000550267 KLHL30-AS1Q8NEE0 82 aa8.29□□□□□ -1.08
VPS29-208ENST00000550267 OR4P4Q8NGL7 312 aa8.29□□□□□ -1.08
VPS29-208ENST00000550267 OTULINQ96BN8 352 aa8.29□□□□□ -1.08
VPS29-208ENST00000550267 CLEC7AQ9BXN2 247 aa8.29□□□□□ -1.08
VPS29-208ENST00000550267 TMEM133Q9H2Q1 129 aa8.29□□□□□ -1.08
VPS29-208ENST00000550267 NIPAL2Q9H841 368 aa8.29□□□□□ -1.08
VPS29-208ENST00000550267 HES4Q9HCC6 221 aa8.29□□□□□ -1.08
VPS29-208ENST00000550267 ABCD2Q9UBJ2 740 aa8.29□□□□□ -1.08
VPS29-208ENST00000550267 KLHDC2Q9Y2U9 406 aa8.29□□□□□ -1.08
VPS29-208ENST00000550267 NDUFAB1O14561 156 aa8.28□□□□□ -1.08
VPS29-208ENST00000550267 SELENOFO60613 162 aa8.28□□□□□ -1.08
VPS29-208ENST00000550267 ZNF737O75373 536 aa8.28□□□□□ -1.08
VPS29-208ENST00000550267 GMNNO75496 209 aa8.28□□□□□ -1.08
VPS29-208ENST00000550267 MMP23AO75900 390 aa8.28□□□□□ -1.08
VPS29-208ENST00000550267 GASTP01350 101 aa8.28□□□□□ -1.08
VPS29-208ENST00000550267 IFNGP01579 166 aa8.28□□□□□ -1.08
VPS29-208ENST00000550267 FABP3P05413 133 aa8.28□□□□□ -1.08
VPS29-208ENST00000550267 LYL1P12980 280 aa8.28□□□□□ -1.08
VPS29-208ENST00000550267 ZNF3P17036 446 aa8.28□□□□□ -1.08
VPS29-208ENST00000550267 CHATP28329 748 aa8.28□□□□□ -1.08
VPS29-208ENST00000550267 BRS3P32247 399 aa8.28□□□□□ -1.08
VPS29-208ENST00000550267 ECI1P42126 302 aa8.28□□□□□ -1.08
VPS29-208ENST00000550267 OR3A4PP47883 348 aa8.28□□□□□ -1.08
VPS29-208ENST00000550267 RIPPLY1Q0D2K3 151 aa8.28□□□□□ -1.08
VPS29-208ENST00000550267 SAMD4BQ5PRF9 694 aaKnown RBP8.28□□□□□ -1.08
VPS29-208ENST00000550267 ZNF684Q5T5D7 378 aa8.28□□□□□ -1.08
VPS29-208ENST00000550267 BAIAP2L2Q6UXY1 529 aa8.28□□□□□ -1.08
VPS29-208ENST00000550267 TRPM8Q7Z2W7 1104 aa8.28□□□□□ -1.08
VPS29-208ENST00000550267 ZNF573Q86YE8 665 aa8.28□□□□□ -1.08
VPS29-208ENST00000550267 OR2T33Q8NG76 320 aa8.28□□□□□ -1.08
VPS29-208ENST00000550267 OTOSQ8NHW6 89 aa8.28□□□□□ -1.08
VPS29-208ENST00000550267 MCUR1Q96AQ8 359 aa8.28□□□□□ -1.08
VPS29-208ENST00000550267 RAX2Q96IS3 184 aa8.28□□□□□ -1.08
VPS29-208ENST00000550267 NOL4LQ96MY1 436 aaPredicted RBP8.28□□□□□ -1.08
VPS29-208ENST00000550267 RCHY1Q96PM5 261 aa8.28□□□□□ -1.08
VPS29-208ENST00000550267 MYLK2Q9H1R3 596 aa8.28□□□□□ -1.08
VPS29-208ENST00000550267 EFCAB1Q9HAE3 211 aa8.28□□□□□ -1.08
VPS29-208ENST00000550267 PALMDQ9NP74 551 aa8.28□□□□□ -1.08
VPS29-208ENST00000550267 FGFR1OP2Q9NVK5 253 aa8.28□□□□□ -1.08
VPS29-208ENST00000550267 DPM3Q9P2X0 92 aa8.28□□□□□ -1.08
VPS29-208ENST00000550267 HHLA2Q9UM44 414 aa8.28□□□□□ -1.08
VPS29-208ENST00000550267 BAIAP2Q9UQB8 552 aa8.28□□□□□ -1.08
VPS29-208ENST00000550267 PIGLQ9Y2B2 252 aa8.28□□□□□ -1.08
VPS29-208ENST00000550267 POLDIP2Q9Y2S7 368 aa8.28□□□□□ -1.08
VPS29-208ENST00000550267 LYVE1Q9Y5Y7 322 aa8.28□□□□□ -1.08
VPS29-208ENST00000550267 A0A0U1RQV5 110 aa8.27□□□□□ -1.09
VPS29-208ENST00000550267 hADV38S2A0JD32 116 aa8.27□□□□□ -1.09
VPS29-208ENST00000550267 TMEM82A0PJX8 343 aa8.27□□□□□ -1.09
VPS29-208ENST00000550267 RIIAD1A6NNX1 92 aa8.27□□□□□ -1.09
VPS29-208ENST00000550267 HMGB1P1B2RPK0 211 aaPredicted RBP8.27□□□□□ -1.09
VPS29-208ENST00000550267 NRASP01111 189 aa8.27□□□□□ -1.09
VPS29-208ENST00000550267 ATP6V1B1P15313 513 aa8.27□□□□□ -1.09
VPS29-208ENST00000550267 PSME3P61289 254 aa8.27□□□□□ -1.09
VPS29-208ENST00000550267 ERVK11-1P61568 191 aa8.27□□□□□ -1.09
VPS29-208ENST00000550267 MEF2CQ06413 473 aaPredicted RBP8.27□□□□□ -1.09
VPS29-208ENST00000550267 SNAPC1Q16533 368 aa8.27□□□□□ -1.09
VPS29-208ENST00000550267 C9orf66Q5T8R8 295 aa8.27□□□□□ -1.09
VPS29-208ENST00000550267 ZFAND6Q6FIF0 208 aa8.27□□□□□ -1.09
VPS29-208ENST00000550267 HACD2Q6Y1H2 254 aa8.27□□□□□ -1.09
VPS29-208ENST00000550267 ZBTB49Q6ZSB9 765 aa8.27□□□□□ -1.09
VPS29-208ENST00000550267 ASRGL1Q7L266 308 aa8.27□□□□□ -1.09
VPS29-208ENST00000550267 ANGPTL5Q86XS5 388 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms