RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 FAAP24Q9BTP7 215 aa11.97□□□□□ -0.49
HDAC7-228ENST00000548938 UCK1Q9HA47 277 aa11.97□□□□□ -0.49
HDAC7-228ENST00000548938 KLRF1Q9NZS2 232 aa11.97□□□□□ -0.49
HDAC7-228ENST00000548938 KCNIP3Q9Y2W7 256 aa11.97□□□□□ -0.49
HDAC7-228ENST00000548938 ZNF850A8MQ14 1090 aa11.97□□□□□ -0.49
HDAC7-228ENST00000548938 CA11O75493 328 aa11.97□□□□□ -0.49
HDAC7-228ENST00000548938 FOLR1P15328 257 aa11.97□□□□□ -0.49
HDAC7-228ENST00000548938 NDUFA6P56556 154 aa11.97□□□□□ -0.49
HDAC7-228ENST00000548938 GRB2P62993 217 aaKnown RBP11.97□□□□□ -0.49
HDAC7-228ENST00000548938 ZNF343Q6P1L6 599 aa11.97□□□□□ -0.49
HDAC7-228ENST00000548938 FBXW12Q6X9E4 464 aa11.97□□□□□ -0.49
HDAC7-228ENST00000548938 SLAMF9Q96A28 289 aa11.97□□□□□ -0.49
HDAC7-228ENST00000548938 MARS2Q96GW9 593 aaKnown RBP11.97□□□□□ -0.49
HDAC7-228ENST00000548938 Q96M66 194 aa11.97□□□□□ -0.49
HDAC7-228ENST00000548938 ABHD14AQ9BUJ0 271 aa11.97□□□□□ -0.49
HDAC7-228ENST00000548938 CHRNA10Q9GZZ6 450 aa11.97□□□□□ -0.49
HDAC7-228ENST00000548938 NCOA6Q14686 2063 aaPredicted RBP11.97□□□□□ -0.49
HDAC7-228ENST00000548938 CFAP54Q96N23 3096 aa11.96□□□□□ -0.49
HDAC7-228ENST00000548938 A0A1W2PR77 199 aa11.96□□□□□ -0.49
HDAC7-228ENST00000548938 CDRT15L2A8MXV6 281 aa11.96□□□□□ -0.49
HDAC7-228ENST00000548938 H7C1Q1 480 aa11.96□□□□□ -0.49
HDAC7-228ENST00000548938 ANGPTL7O43827 346 aa11.96□□□□□ -0.49
HDAC7-228ENST00000548938 SLC34A2O95436 690 aa11.96□□□□□ -0.49
HDAC7-228ENST00000548938 IGLV3-1P01715 115 aa11.96□□□□□ -0.49
HDAC7-228ENST00000548938 KLK3P07288 261 aaPredicted RBP11.96□□□□□ -0.49
HDAC7-228ENST00000548938 CD38P28907 300 aa11.96□□□□□ -0.49
HDAC7-228ENST00000548938 CDX1P47902 265 aaPredicted RBP11.96□□□□□ -0.49
HDAC7-228ENST00000548938 ZNF41P51814 821 aaPredicted RBP11.96□□□□□ -0.49
HDAC7-228ENST00000548938 CEBPGP53567 150 aa11.96□□□□□ -0.49
HDAC7-228ENST00000548938 ARL6IP1Q15041 203 aa11.96□□□□□ -0.49
HDAC7-228ENST00000548938 PPA1Q15181 289 aa11.96□□□□□ -0.49
HDAC7-228ENST00000548938 PLPPR5Q32ZL2 321 aa11.96□□□□□ -0.49
HDAC7-228ENST00000548938 C14orf28Q4W4Y0 310 aa11.96□□□□□ -0.49
HDAC7-228ENST00000548938 LFNGQ8NES3 379 aa11.96□□□□□ -0.49
HDAC7-228ENST00000548938 HAS2Q92819 552 aa11.96□□□□□ -0.49
HDAC7-228ENST00000548938 CHST5Q9GZS9 411 aa11.96□□□□□ -0.49
HDAC7-228ENST00000548938 ZNF160Q9HCG1 818 aa11.96□□□□□ -0.49
HDAC7-228ENST00000548938 TREM2Q9NZC2 230 aa11.96□□□□□ -0.49
HDAC7-228ENST00000548938 AK3Q9UIJ7 227 aa11.96□□□□□ -0.49
HDAC7-228ENST00000548938 PIGLQ9Y2B2 252 aa11.96□□□□□ -0.49
HDAC7-228ENST00000548938 B3GALT1Q9Y5Z6 326 aa11.96□□□□□ -0.49
HDAC7-228ENST00000548938 EXPH5Q8NEV8 1989 aa11.96□□□□□ -0.49
HDAC7-228ENST00000548938 CCDC187A0A096LP49 1063 aa11.96□□□□□ -0.49
HDAC7-228ENST00000548938 DHRS3O75911 302 aa11.96□□□□□ -0.49
HDAC7-228ENST00000548938 CSNK1A1P48729 337 aa11.96□□□□□ -0.49
HDAC7-228ENST00000548938 TAF9Q16594 264 aa11.96□□□□□ -0.49
HDAC7-228ENST00000548938 RTL6Q6ICC9 239 aa11.96□□□□□ -0.49
HDAC7-228ENST00000548938 OR11L1Q8NGX0 322 aa11.96□□□□□ -0.49
HDAC7-228ENST00000548938 RAB39BQ96DA2 213 aa11.96□□□□□ -0.49
HDAC7-228ENST00000548938 GALNT14Q96FL9 552 aa11.96□□□□□ -0.49
HDAC7-228ENST00000548938 C18orf12Q96KH6 178 aa11.96□□□□□ -0.49
HDAC7-228ENST00000548938 SLC2A9Q9NRM0 540 aa11.96□□□□□ -0.49
HDAC7-228ENST00000548938 DOK5Q9P104 306 aa11.96□□□□□ -0.49
HDAC7-228ENST00000548938 OR5H15A6NDH6 313 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 H3BQ15 152 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 ST8SIA3O43173 380 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 DUSP1P28562 367 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 SFTPDP35247 375 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 NOVA1P51513 510 aaKnown RBP11.95□□□□□ -0.5
HDAC7-228ENST00000548938 ZNF133P52736 654 aaPredicted RBP11.95□□□□□ -0.5
HDAC7-228ENST00000548938 HAGHQ16775 308 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 LIAT1Q6ZQX7 453 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 C20orf196Q8IYI0 205 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 ZNF383Q8NA42 475 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 OR6X1Q8NH79 312 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 A0A1B0GW64 132 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 FAM221AA4D161 298 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 H0YL77 283 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 LY86O95711 162 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 CXCL1P09341 107 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 GPX4P36969 197 aaPredicted RBP11.95□□□□□ -0.5
HDAC7-228ENST00000548938 EWSR1Q01844 656 aaKnown RBP eCLIP11.95□□□□□ -0.5
HDAC7-228ENST00000548938 CHAF1BQ13112 559 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 IL13RA2Q14627 380 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 KCNMB1Q16558 191 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 LRRC18Q8N456 261 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 Q8WTZ3 238 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 SGK3Q96BR1 496 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 MSI2Q96DH6 328 aaKnown RBP11.95□□□□□ -0.5
HDAC7-228ENST00000548938 GUCD1Q96NT3 240 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 PIGQQ9BRB3 760 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 SDHAF3Q9NRP4 125 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 NECAP2Q9NVZ3 263 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 URGCP-MRPS24S4R325 110 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 V9GYS6 101 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 RALGAPA1Q6GYQ0 2036 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 A0A1B0GX78 115 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 S100A2P29034 98 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 OR1D5P58170 312 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 EIF3IQ13347 325 aaKnown RBP11.95□□□□□ -0.5
HDAC7-228ENST00000548938 ZNF674Q2M3X9 581 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 HIKESHIQ53FT3 197 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 BRICD5Q6PL45 260 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 ZFP62Q8NB50 900 aaPredicted RBP11.95□□□□□ -0.5
HDAC7-228ENST00000548938 CADM4Q8NFZ8 388 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 PP6455Q8WZ26 134 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 BOD1Q96IK1 185 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 MRGPRX4Q96LA9 322 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 SUCNR1Q9BXA5 334 aa11.95□□□□□ -0.5
HDAC7-228ENST00000548938 GPR173Q9NS66 373 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms