RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 JSRP1Q96MG2 331 aaPredicted RBP12.3□□□□□ -0.44
RAPGEF3-218ENST00000548919 NECAP2Q9NVZ3 263 aa12.3□□□□□ -0.44
RAPGEF3-218ENST00000548919 RCL1Q9Y2P8 373 aaKnown RBP12.3□□□□□ -0.44
RAPGEF3-218ENST00000548919 KCNIP3Q9Y2W7 256 aa12.3□□□□□ -0.44
RAPGEF3-218ENST00000548919 MTCH2Q9Y6C9 303 aa12.3□□□□□ -0.44
RAPGEF3-218ENST00000548919 UMAD1C9J7I0 102 aa12.3□□□□□ -0.44
RAPGEF3-218ENST00000548919 NPIPA2E9PIF3 369 aa12.3□□□□□ -0.44
RAPGEF3-218ENST00000548919 NPIPA3F8WFD2 350 aa12.3□□□□□ -0.44
RAPGEF3-218ENST00000548919 ZNF14P17017 642 aaPredicted RBP12.3□□□□□ -0.44
RAPGEF3-218ENST00000548919 ECI1P42126 302 aa12.3□□□□□ -0.44
RAPGEF3-218ENST00000548919 S100A12P80511 92 aa12.3□□□□□ -0.44
RAPGEF3-218ENST00000548919 H3F3AP84243 136 aa12.3□□□□□ -0.44
RAPGEF3-218ENST00000548919 SLC22A25Q6T423 547 aa12.3□□□□□ -0.44
RAPGEF3-218ENST00000548919 METTL9Q9H1A3 318 aa12.3□□□□□ -0.44
RAPGEF3-218ENST00000548919 ARV1Q9H2C2 271 aa12.3□□□□□ -0.44
RAPGEF3-218ENST00000548919 SLC2A9Q9NRM0 540 aa12.3□□□□□ -0.44
RAPGEF3-218ENST00000548919 C19orf12Q9NSK7 152 aa12.3□□□□□ -0.44
RAPGEF3-218ENST00000548919 A0A1W2PPE2 198 aa12.29□□□□□ -0.44
RAPGEF3-218ENST00000548919 DHHO43323 396 aa12.29□□□□□ -0.44
RAPGEF3-218ENST00000548919 MT-ND4LP03901 98 aa12.29□□□□□ -0.44
RAPGEF3-218ENST00000548919 HOXB1P14653 301 aaPredicted RBP12.29□□□□□ -0.44
RAPGEF3-218ENST00000548919 PAX6P26367 422 aa12.29□□□□□ -0.44
RAPGEF3-218ENST00000548919 OTX1P32242 354 aaPredicted RBP12.29□□□□□ -0.44
RAPGEF3-218ENST00000548919 PPP1CCP36873 323 aaKnown RBP12.29□□□□□ -0.44
RAPGEF3-218ENST00000548919 ARL6IP1Q15041 203 aa12.29□□□□□ -0.44
RAPGEF3-218ENST00000548919 RAET1LQ5VY80 246 aa12.29□□□□□ -0.44
RAPGEF3-218ENST00000548919 LUZP4Q9P127 313 aa12.29□□□□□ -0.44
RAPGEF3-218ENST00000548919 BORCS7-ASMTA0A0B4J1R7 106 aa12.29□□□□□ -0.44
RAPGEF3-218ENST00000548919 UBE2CO00762 179 aa12.29□□□□□ -0.44
RAPGEF3-218ENST00000548919 CA11O75493 328 aa12.29□□□□□ -0.44
RAPGEF3-218ENST00000548919 DKK1O94907 266 aa12.29□□□□□ -0.44
RAPGEF3-218ENST00000548919 AGAP20933 346 aa12.29□□□□□ -0.44
RAPGEF3-218ENST00000548919 EIF1P41567 113 aaKnown RBP12.29□□□□□ -0.44
RAPGEF3-218ENST00000548919 P2RY1P47900 373 aa12.29□□□□□ -0.44
RAPGEF3-218ENST00000548919 PPA1Q15181 289 aa12.29□□□□□ -0.44
RAPGEF3-218ENST00000548919 C10orf128Q5T292 105 aa12.29□□□□□ -0.44
RAPGEF3-218ENST00000548919 ADAM5Q6NVV9 412 aa12.29□□□□□ -0.44
RAPGEF3-218ENST00000548919 TMEM182Q6ZP80 229 aaPredicted RBP12.29□□□□□ -0.44
RAPGEF3-218ENST00000548919 HPSE2Q8WWQ2 592 aa12.29□□□□□ -0.44
RAPGEF3-218ENST00000548919 TMEM54Q969K7 222 aa12.29□□□□□ -0.44
RAPGEF3-218ENST00000548919 LOC102725191A0A1B0GVB3 256 aa12.28□□□□□ -0.44
RAPGEF3-218ENST00000548919 SEC11BP0C7V7 166 aa12.28□□□□□ -0.44
RAPGEF3-218ENST00000548919 SHBQ15464 509 aa12.28□□□□□ -0.44
RAPGEF3-218ENST00000548919 ZNF239Q16600 458 aaKnown RBP12.28□□□□□ -0.44
RAPGEF3-218ENST00000548919 RTL6Q6ICC9 239 aa12.28□□□□□ -0.44
RAPGEF3-218ENST00000548919 GUSBP11Q6P575 273 aa12.28□□□□□ -0.44
RAPGEF3-218ENST00000548919 FBXW12Q6X9E4 464 aa12.28□□□□□ -0.44
RAPGEF3-218ENST00000548919 MEX3BQ6ZN04 569 aaKnown RBP12.28□□□□□ -0.44
RAPGEF3-218ENST00000548919 C5orf24Q7Z6I8 188 aa12.28□□□□□ -0.44
RAPGEF3-218ENST00000548919 TMEM123Q8N131 208 aa12.28□□□□□ -0.44
RAPGEF3-218ENST00000548919 OR10AD1Q8NGE0 317 aa12.28□□□□□ -0.44
RAPGEF3-218ENST00000548919 RARRES2Q99969 163 aa12.28□□□□□ -0.44
RAPGEF3-218ENST00000548919 GINS3Q9BRX5 216 aa12.28□□□□□ -0.44
RAPGEF3-218ENST00000548919 ULBP2Q9BZM5 246 aa12.28□□□□□ -0.44
RAPGEF3-218ENST00000548919 NIT2Q9NQR4 276 aa12.28□□□□□ -0.44
RAPGEF3-218ENST00000548919 IGKV1-12A0A0C4DH73 117 aa12.28□□□□□ -0.44
RAPGEF3-218ENST00000548919 BCAT2O15382 392 aaPredicted RBP12.28□□□□□ -0.44
RAPGEF3-218ENST00000548919 GPR137BO60478 399 aa12.28□□□□□ -0.44
RAPGEF3-218ENST00000548919 IGKV1D-12P01611 117 aa12.28□□□□□ -0.44
RAPGEF3-218ENST00000548919 NQO2P16083 231 aa12.28□□□□□ -0.44
RAPGEF3-218ENST00000548919 RAB5AP20339 215 aa12.28□□□□□ -0.44
RAPGEF3-218ENST00000548919 HMGN3Q15651 99 aa12.28□□□□□ -0.44
RAPGEF3-218ENST00000548919 ZNF774Q6NX45 483 aa12.28□□□□□ -0.44
RAPGEF3-218ENST00000548919 ZNF561Q8N587 486 aa12.28□□□□□ -0.44
RAPGEF3-218ENST00000548919 FAM213BQ8TBF2 198 aa12.28□□□□□ -0.44
RAPGEF3-218ENST00000548919 SPTSSAQ969W0 71 aa12.28□□□□□ -0.44
RAPGEF3-218ENST00000548919 C18orf12Q96KH6 178 aa12.28□□□□□ -0.44
RAPGEF3-218ENST00000548919 GPR37O15354 613 aa12.27□□□□□ -0.44
RAPGEF3-218ENST00000548919 PHF1O43189 567 aaPredicted RBP12.27□□□□□ -0.44
RAPGEF3-218ENST00000548919 FABP1P07148 127 aa12.27□□□□□ -0.44
RAPGEF3-218ENST00000548919 ITGA3P26006 1051 aa12.27□□□□□ -0.44
RAPGEF3-218ENST00000548919 CHATP28329 748 aa12.27□□□□□ -0.44
RAPGEF3-218ENST00000548919 SULT1A1P50225 295 aa12.27□□□□□ -0.44
RAPGEF3-218ENST00000548919 HIST1H3AP68431 136 aa12.27□□□□□ -0.44
RAPGEF3-218ENST00000548919 EIF3IQ13347 325 aaKnown RBP12.27□□□□□ -0.44
RAPGEF3-218ENST00000548919 HIST2H3PS2Q5TEC6 136 aa12.27□□□□□ -0.44
RAPGEF3-218ENST00000548919 Q6ZPA2 131 aa12.27□□□□□ -0.44
RAPGEF3-218ENST00000548919 LIAT1Q6ZQX7 453 aa12.27□□□□□ -0.44
RAPGEF3-218ENST00000548919 HIST2H3AQ71DI3 136 aa12.27□□□□□ -0.44
RAPGEF3-218ENST00000548919 FBXL14Q8N1E6 418 aa12.27□□□□□ -0.44
RAPGEF3-218ENST00000548919 MSI2Q96DH6 328 aaKnown RBP12.27□□□□□ -0.44
RAPGEF3-218ENST00000548919 GSN-AS1Q9NRJ2 163 aa12.27□□□□□ -0.44
RAPGEF3-218ENST00000548919 RARRES3Q9UL19 164 aa12.27□□□□□ -0.44
RAPGEF3-218ENST00000548919 NSG1A0A0A6YYJ2 146 aa12.27□□□□□ -0.45
RAPGEF3-218ENST00000548919 A0A1W2PQM1 296 aa12.27□□□□□ -0.45
RAPGEF3-218ENST00000548919 H7C1Q1 480 aa12.27□□□□□ -0.45
RAPGEF3-218ENST00000548919 TNFSF11O14788 317 aa12.27□□□□□ -0.45
RAPGEF3-218ENST00000548919 CCL3P10147 92 aa12.27□□□□□ -0.45
RAPGEF3-218ENST00000548919 SRFP11831 508 aa12.27□□□□□ -0.45
RAPGEF3-218ENST00000548919 GLP1RP43220 463 aa12.27□□□□□ -0.45
RAPGEF3-218ENST00000548919 AFF3P51826 1226 aaKnown RBP12.27□□□□□ -0.45
RAPGEF3-218ENST00000548919 CLINT1Q14677 625 aa12.27□□□□□ -0.45
RAPGEF3-218ENST00000548919 RNF212Q495C1 297 aa12.27□□□□□ -0.45
RAPGEF3-218ENST00000548919 ZNF385CQ66K41 422 aaPredicted RBP12.27□□□□□ -0.45
RAPGEF3-218ENST00000548919 ZIC4Q8N9L1 334 aa12.27□□□□□ -0.45
RAPGEF3-218ENST00000548919 SUMF1Q8NBK3 374 aa12.27□□□□□ -0.45
RAPGEF3-218ENST00000548919 TP53RKQ96S44 253 aa12.27□□□□□ -0.45
RAPGEF3-218ENST00000548919 ABHD14AQ9BUJ0 271 aa12.27□□□□□ -0.45
RAPGEF3-218ENST00000548919 TXNL1O43396 289 aa12.26□□□□□ -0.45
RAPGEF3-218ENST00000548919 LCATP04180 440 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms