RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 CST11Q9H112 138 aa17.01■□□□□ 0.31
CTDSP2-204ENST00000548823 LPAR5Q9H1C0 372 aa17.01■□□□□ 0.31
CTDSP2-204ENST00000548823 TGP01266 2768 aa17■□□□□ 0.31
CTDSP2-204ENST00000548823 ZNF816-ZNF321PA0A0X1KG74 233 aa17■□□□□ 0.31
CTDSP2-204ENST00000548823 BOLA2-SMG1P6H3BVE0 249 aa17■□□□□ 0.31
CTDSP2-204ENST00000548823 TCF21O43680 179 aa17■□□□□ 0.31
CTDSP2-204ENST00000548823 GMDSO60547 372 aa17■□□□□ 0.31
CTDSP2-204ENST00000548823 PTHLHP12272 177 aa17■□□□□ 0.31
CTDSP2-204ENST00000548823 GIFP27352 417 aa17■□□□□ 0.31
CTDSP2-204ENST00000548823 GZMKP49863 264 aa17■□□□□ 0.31
CTDSP2-204ENST00000548823 MALLQ13021 153 aa17■□□□□ 0.31
CTDSP2-204ENST00000548823 LHFPL2Q6ZUX7 228 aa17■□□□□ 0.31
CTDSP2-204ENST00000548823 FAM89BQ8N5H3 189 aa17■□□□□ 0.31
CTDSP2-204ENST00000548823 TMEM229BQ8NBD8 167 aa17■□□□□ 0.31
CTDSP2-204ENST00000548823 OR10R2Q8NGX6 335 aa17■□□□□ 0.31
CTDSP2-204ENST00000548823 SPACA5Q96QH8 159 aa17■□□□□ 0.31
CTDSP2-204ENST00000548823 URM1Q9BTM9 101 aaKnown RBP17■□□□□ 0.31
CTDSP2-204ENST00000548823 CHODLQ9H9P2 273 aa17■□□□□ 0.31
CTDSP2-204ENST00000548823 CISD1Q9NZ45 108 aaKnown RBP17■□□□□ 0.31
CTDSP2-204ENST00000548823 TENM1Q9UKZ4 2725 aa16.99■□□□□ 0.31
CTDSP2-204ENST00000548823 CDC14BO60729 498 aa16.99■□□□□ 0.31
CTDSP2-204ENST00000548823 NRASP01111 189 aa16.99■□□□□ 0.31
CTDSP2-204ENST00000548823 MT-ND4P03905 459 aa16.99■□□□□ 0.31
CTDSP2-204ENST00000548823 GSTP1P09211 210 aaKnown RBP16.99■□□□□ 0.31
CTDSP2-204ENST00000548823 COX5AP20674 150 aa16.99■□□□□ 0.31
CTDSP2-204ENST00000548823 IGHV1-2P23083 117 aa16.99■□□□□ 0.31
CTDSP2-204ENST00000548823 APLNRP35414 380 aa16.99■□□□□ 0.31
CTDSP2-204ENST00000548823 MOGAT2Q3SYC2 334 aa16.99■□□□□ 0.31
CTDSP2-204ENST00000548823 ASCL4Q6XD76 172 aa16.99■□□□□ 0.31
CTDSP2-204ENST00000548823 RNF144BQ7Z419 303 aa16.99■□□□□ 0.31
CTDSP2-204ENST00000548823 ZNF584Q8IVC4 421 aa16.99■□□□□ 0.31
CTDSP2-204ENST00000548823 OR56B4Q8NH76 319 aa16.99■□□□□ 0.31
CTDSP2-204ENST00000548823 UBASH3BQ8TF42 649 aa16.99■□□□□ 0.31
CTDSP2-204ENST00000548823 TMEM59Q9BXS4 323 aa16.99■□□□□ 0.31
CTDSP2-204ENST00000548823 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.99■□□□□ 0.31
CTDSP2-204ENST00000548823 C7orf66A4D0T2 115 aa16.98■□□□□ 0.31
CTDSP2-204ENST00000548823 C5orf49A4QMS7 147 aa16.98■□□□□ 0.31
CTDSP2-204ENST00000548823 ICMTO60725 284 aa16.98■□□□□ 0.31
CTDSP2-204ENST00000548823 AKAIN1P0CW23 69 aa16.98■□□□□ 0.31
CTDSP2-204ENST00000548823 USF1P22415 310 aaPredicted RBP16.98■□□□□ 0.31
CTDSP2-204ENST00000548823 FUT6P51993 359 aa16.98■□□□□ 0.31
CTDSP2-204ENST00000548823 ZP1P60852 638 aa16.98■□□□□ 0.31
CTDSP2-204ENST00000548823 BSPH1Q075Z2 132 aa16.98■□□□□ 0.31
CTDSP2-204ENST00000548823 PCGF3Q3KNV8 242 aa16.98■□□□□ 0.31
CTDSP2-204ENST00000548823 OR56B1Q8NGI3 324 aa16.98■□□□□ 0.31
CTDSP2-204ENST00000548823 FAM168AQ92567 244 aa16.98■□□□□ 0.31
CTDSP2-204ENST00000548823 TM2D1Q9BX74 207 aa16.98■□□□□ 0.31
CTDSP2-204ENST00000548823 GPR173Q9NS66 373 aa16.98■□□□□ 0.31
CTDSP2-204ENST00000548823 ALG5Q9Y673 324 aa16.98■□□□□ 0.31
CTDSP2-204ENST00000548823 CCNKO75909 580 aa16.97■□□□□ 0.31
CTDSP2-204ENST00000548823 H2AFB2P0C5Z0 115 aa16.97■□□□□ 0.31
CTDSP2-204ENST00000548823 RBP2P50120 134 aa16.97■□□□□ 0.31
CTDSP2-204ENST00000548823 TAS2R19P59542 299 aa16.97■□□□□ 0.31
CTDSP2-204ENST00000548823 RPS27AP62979 156 aaKnown RBP16.97■□□□□ 0.31
CTDSP2-204ENST00000548823 GUCA2AQ02747 115 aa16.97■□□□□ 0.31
CTDSP2-204ENST00000548823 ARL6IP1Q15041 203 aa16.97■□□□□ 0.31
CTDSP2-204ENST00000548823 GABRA6Q16445 453 aa16.97■□□□□ 0.31
CTDSP2-204ENST00000548823 CARTPTQ16568 116 aa16.97■□□□□ 0.31
CTDSP2-204ENST00000548823 PNLIPRP3Q17RR3 467 aa16.97■□□□□ 0.31
CTDSP2-204ENST00000548823 HIKESHIQ53FT3 197 aa16.97■□□□□ 0.31
CTDSP2-204ENST00000548823 GABRG1Q8N1C3 465 aa16.97■□□□□ 0.31
CTDSP2-204ENST00000548823 CSNK2A3Q8NEV1 391 aa16.97■□□□□ 0.31
CTDSP2-204ENST00000548823 OR5L1Q8NGL2 311 aa16.97■□□□□ 0.31
CTDSP2-204ENST00000548823 OR6F1Q8NGZ6 308 aa16.97■□□□□ 0.31
CTDSP2-204ENST00000548823 TNFAIP8L1Q8WVP5 186 aa16.97■□□□□ 0.31
CTDSP2-204ENST00000548823 C1orf159Q96HA4 380 aa16.97■□□□□ 0.31
CTDSP2-204ENST00000548823 S100A13Q99584 98 aa16.97■□□□□ 0.31
CTDSP2-204ENST00000548823 NUDT15Q9NV35 164 aa16.97■□□□□ 0.31
CTDSP2-204ENST00000548823 MYEF2Q9P2K5 600 aaKnown RBP16.97■□□□□ 0.31
CTDSP2-204ENST00000548823 SLC7A11Q9UPY5 501 aa16.97■□□□□ 0.31
CTDSP2-204ENST00000548823 MPIG6BO95866 241 aa16.96■□□□□ 0.31
CTDSP2-204ENST00000548823 CST4P01036 141 aa16.96■□□□□ 0.31
CTDSP2-204ENST00000548823 RCVRNP35243 200 aa16.96■□□□□ 0.31
CTDSP2-204ENST00000548823 VEGFCP49767 419 aa16.96■□□□□ 0.31
CTDSP2-204ENST00000548823 MECP2P51608 486 aaKnown RBP16.96■□□□□ 0.31
CTDSP2-204ENST00000548823 ATP1B3P54709 279 aa16.96■□□□□ 0.31
CTDSP2-204ENST00000548823 MTCP1P56278 107 aa16.96■□□□□ 0.31
CTDSP2-204ENST00000548823 CDNFQ49AH0 187 aa16.96■□□□□ 0.31
CTDSP2-204ENST00000548823 Q6ZTK2 550 aa16.96■□□□□ 0.31
CTDSP2-204ENST00000548823 MDP1Q86V88 176 aa16.96■□□□□ 0.31
CTDSP2-204ENST00000548823 C17orf78Q8N4C9 275 aa16.96■□□□□ 0.31
CTDSP2-204ENST00000548823 ZNF525Q8N782 197 aa16.96■□□□□ 0.31
CTDSP2-204ENST00000548823 TMEM104Q8NE00 496 aa16.96■□□□□ 0.31
CTDSP2-204ENST00000548823 C10orf105Q8TEF2 133 aa16.96■□□□□ 0.31
CTDSP2-204ENST00000548823 BORCS8Q96FH0 119 aa16.96■□□□□ 0.31
CTDSP2-204ENST00000548823 MRPL15Q9P015 296 aaKnown RBP16.96■□□□□ 0.31
CTDSP2-204ENST00000548823 ING4Q9UNL4 249 aa16.96■□□□□ 0.31
CTDSP2-204ENST00000548823 DPRXA6NFQ7 191 aa16.95■□□□□ 0.3
CTDSP2-204ENST00000548823 PRAF2O60831 178 aa16.95■□□□□ 0.3
CTDSP2-204ENST00000548823 ZNF780AO75290 641 aaPredicted RBP16.95■□□□□ 0.3
CTDSP2-204ENST00000548823 CA11O75493 328 aa16.95■□□□□ 0.3
CTDSP2-204ENST00000548823 ZNF14P17017 642 aaPredicted RBP16.95■□□□□ 0.3
CTDSP2-204ENST00000548823 CCR6P51684 374 aa16.95■□□□□ 0.3
CTDSP2-204ENST00000548823 UBE2NP61088 152 aaKnown RBP16.95■□□□□ 0.3
CTDSP2-204ENST00000548823 CD300CQ08708 224 aa16.95■□□□□ 0.3
CTDSP2-204ENST00000548823 GK2Q14410 553 aaPredicted RBP16.95■□□□□ 0.3
CTDSP2-204ENST00000548823 TBC1D28Q2M2D7 210 aa16.95■□□□□ 0.3
CTDSP2-204ENST00000548823 MRPL21Q7Z2W9 205 aaKnown RBP16.95■□□□□ 0.3
CTDSP2-204ENST00000548823 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.95■□□□□ 0.3
CTDSP2-204ENST00000548823 PXT1Q8NFP0 134 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms