RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 ERVK11-1P61568 191 aa12.98□□□□□ -0.33
DDX54-205ENST00000548786 COL10A1Q03692 680 aa12.98□□□□□ -0.33
DDX54-205ENST00000548786 SLC34A1Q06495 639 aa12.98□□□□□ -0.33
DDX54-205ENST00000548786 IL18R1Q13478 541 aa12.98□□□□□ -0.33
DDX54-205ENST00000548786 PDCD1Q15116 288 aa12.98□□□□□ -0.33
DDX54-205ENST00000548786 TMPRSS11AQ6ZMR5 421 aa12.98□□□□□ -0.33
DDX54-205ENST00000548786 C9orf139Q6ZV77 190 aa12.98□□□□□ -0.33
DDX54-205ENST00000548786 UTS2BQ765I0 119 aa12.98□□□□□ -0.33
DDX54-205ENST00000548786 EGFL6Q8IUX8 553 aa12.98□□□□□ -0.33
DDX54-205ENST00000548786 CMTM4Q8IZR5 234 aa12.98□□□□□ -0.33
DDX54-205ENST00000548786 ZFP41Q8N8Y5 198 aa12.98□□□□□ -0.33
DDX54-205ENST00000548786 FAM216AQ8WUB2 273 aa12.98□□□□□ -0.33
DDX54-205ENST00000548786 NRG4Q8WWG1 115 aa12.98□□□□□ -0.33
DDX54-205ENST00000548786 GATAD2BQ8WXI9 593 aa12.98□□□□□ -0.33
DDX54-205ENST00000548786 RGP1Q92546 391 aaPredicted RBP12.98□□□□□ -0.33
DDX54-205ENST00000548786 GGHQ92820 318 aa12.98□□□□□ -0.33
DDX54-205ENST00000548786 NEK6Q9HC98 313 aa12.98□□□□□ -0.33
DDX54-205ENST00000548786 DIMT1Q9UNQ2 313 aaKnown RBP12.98□□□□□ -0.33
DDX54-205ENST00000548786 KPTNQ9Y664 436 aa12.98□□□□□ -0.33
DDX54-205ENST00000548786 IRGMA1A4Y4 181 aa12.97□□□□□ -0.33
DDX54-205ENST00000548786 KNG1P01042 644 aa12.97□□□□□ -0.33
DDX54-205ENST00000548786 HCKP08631 526 aa12.97□□□□□ -0.33
DDX54-205ENST00000548786 DUSP1P28562 367 aa12.97□□□□□ -0.33
DDX54-205ENST00000548786 MRPL28Q13084 256 aaKnown RBP12.97□□□□□ -0.33
DDX54-205ENST00000548786 LAIR2Q6ISS4 152 aa12.97□□□□□ -0.33
DDX54-205ENST00000548786 LHFPL2Q6ZUX7 228 aa12.97□□□□□ -0.33
DDX54-205ENST00000548786 AHSA2Q719I0 299 aa12.97□□□□□ -0.33
DDX54-205ENST00000548786 PNKDQ8N490 385 aa12.97□□□□□ -0.33
DDX54-205ENST00000548786 ZNF561Q8N587 486 aa12.97□□□□□ -0.33
DDX54-205ENST00000548786 Q8N7P7 452 aa12.97□□□□□ -0.33
DDX54-205ENST00000548786 BPIFB6Q8NFQ5 453 aa12.97□□□□□ -0.33
DDX54-205ENST00000548786 GCDHQ92947 438 aaPredicted RBP12.97□□□□□ -0.33
DDX54-205ENST00000548786 TMEM80Q96HE8 168 aa12.97□□□□□ -0.33
DDX54-205ENST00000548786 NKX3-1Q99801 234 aaPredicted RBP12.97□□□□□ -0.33
DDX54-205ENST00000548786 JAM3Q9BX67 310 aa12.97□□□□□ -0.33
DDX54-205ENST00000548786 ZCCHC4Q9H5U6 513 aa12.97□□□□□ -0.33
DDX54-205ENST00000548786 CAB39Q9Y376 341 aaPredicted RBP12.97□□□□□ -0.33
DDX54-205ENST00000548786 EXOSC1Q9Y3B2 195 aaKnown RBP12.97□□□□□ -0.33
DDX54-205ENST00000548786 SIRT4Q9Y6E7 314 aaPredicted RBP12.97□□□□□ -0.33
DDX54-205ENST00000548786 A0A0U1RQK1 487 aa12.96□□□□□ -0.33
DDX54-205ENST00000548786 PNMA8CA0A1B0GUJ8 204 aa12.96□□□□□ -0.33
DDX54-205ENST00000548786 H0YAE9 185 aa12.96□□□□□ -0.33
DDX54-205ENST00000548786 HOXA3O43365 443 aaPredicted RBP12.96□□□□□ -0.33
DDX54-205ENST00000548786 CYB5AP00167 134 aa12.96□□□□□ -0.33
DDX54-205ENST00000548786 LALBAP00709 142 aa12.96□□□□□ -0.33
DDX54-205ENST00000548786 PRKACAP17612 351 aa12.96□□□□□ -0.33
DDX54-205ENST00000548786 AQP4P55087 323 aa12.96□□□□□ -0.33
DDX54-205ENST00000548786 ST3GAL4Q11206 333 aa12.96□□□□□ -0.33
DDX54-205ENST00000548786 CDK5R1Q15078 307 aa12.96□□□□□ -0.33
DDX54-205ENST00000548786 SLC9A3R2Q15599 337 aa12.96□□□□□ -0.33
DDX54-205ENST00000548786 C11orf91Q3C1V1 193 aa12.96□□□□□ -0.33
DDX54-205ENST00000548786 MKXQ8IYA7 352 aa12.96□□□□□ -0.33
DDX54-205ENST00000548786 KIR3DL3Q8N743 410 aa12.96□□□□□ -0.33
DDX54-205ENST00000548786 DNAAF1Q8NEP3 725 aa12.96□□□□□ -0.33
DDX54-205ENST00000548786 OR13C5Q8NGS8 318 aa12.96□□□□□ -0.33
DDX54-205ENST00000548786 C8orf46Q8TAG6 207 aa12.96□□□□□ -0.33
DDX54-205ENST00000548786 ZFAND2BQ8WV99 257 aa12.96□□□□□ -0.33
DDX54-205ENST00000548786 SPSB1Q96BD6 273 aa12.96□□□□□ -0.33
DDX54-205ENST00000548786 CHCHD3Q9NX63 227 aaKnown RBP12.96□□□□□ -0.33
DDX54-205ENST00000548786 RNASEK-C17orf49H0YIS7 233 aa12.95□□□□□ -0.34
DDX54-205ENST00000548786 TK1P04183 234 aa12.95□□□□□ -0.34
DDX54-205ENST00000548786 RPSAP08865 295 aaKnown RBP12.95□□□□□ -0.34
DDX54-205ENST00000548786 PRTN3P24158 256 aa12.95□□□□□ -0.34
DDX54-205ENST00000548786 RPL31P62899 125 aaKnown RBP12.95□□□□□ -0.34
DDX54-205ENST00000548786 PDZK1IP1Q13113 114 aa12.95□□□□□ -0.34
DDX54-205ENST00000548786 EDDM3AQ14507 147 aa12.95□□□□□ -0.34
DDX54-205ENST00000548786 TUSC1Q2TAM9 212 aa12.95□□□□□ -0.34
DDX54-205ENST00000548786 RPL22L1Q6P5R6 122 aaKnown RBP12.95□□□□□ -0.34
DDX54-205ENST00000548786 C12orf54Q6X4T0 127 aa12.95□□□□□ -0.34
DDX54-205ENST00000548786 SERPINA12Q8IW75 414 aa12.95□□□□□ -0.34
DDX54-205ENST00000548786 FAM58AQ8N1B3 248 aa12.95□□□□□ -0.34
DDX54-205ENST00000548786 PIP4P2Q8N4L2 257 aa12.95□□□□□ -0.34
DDX54-205ENST00000548786 OR51A2Q8NGJ7 313 aa12.95□□□□□ -0.34
DDX54-205ENST00000548786 TFAP2CQ92754 450 aa12.95□□□□□ -0.34
DDX54-205ENST00000548786 ORAI1Q96D31 301 aa12.95□□□□□ -0.34
DDX54-205ENST00000548786 CHST6Q9GZX3 395 aa12.95□□□□□ -0.34
DDX54-205ENST00000548786 BABAM2Q9NXR7 383 aa12.95□□□□□ -0.34
DDX54-205ENST00000548786 TAS2R4Q9NYW5 299 aa12.95□□□□□ -0.34
DDX54-205ENST00000548786 HSPE1-MOB4S4R3N1 261 aa12.95□□□□□ -0.34
DDX54-205ENST00000548786 TRBV23-1A0A0A0MS06 115 aa12.94□□□□□ -0.34
DDX54-205ENST00000548786 IGKV1-12A0A0C4DH73 117 aa12.94□□□□□ -0.34
DDX54-205ENST00000548786 EFCAB10A6NFE3 127 aa12.94□□□□□ -0.34
DDX54-205ENST00000548786 SULT1B1O43704 296 aa12.94□□□□□ -0.34
DDX54-205ENST00000548786 HAND1O96004 215 aa12.94□□□□□ -0.34
DDX54-205ENST00000548786 IGKV1D-12P01611 117 aa12.94□□□□□ -0.34
DDX54-205ENST00000548786 CCL3L1P16619 93 aa12.94□□□□□ -0.34
DDX54-205ENST00000548786 GABRR1P24046 479 aa12.94□□□□□ -0.34
DDX54-205ENST00000548786 EDDM3BP56851 147 aa12.94□□□□□ -0.34
DDX54-205ENST00000548786 ERVFRD-1P60508 538 aa12.94□□□□□ -0.34
DDX54-205ENST00000548786 MED21Q13503 144 aa12.94□□□□□ -0.34
DDX54-205ENST00000548786 BLMHQ13867 455 aa12.94□□□□□ -0.34
DDX54-205ENST00000548786 ZNF273Q14593 569 aa12.94□□□□□ -0.34
DDX54-205ENST00000548786 TMEM200BQ69YZ2 307 aa12.94□□□□□ -0.34
DDX54-205ENST00000548786 SATL1Q86VE3 508 aa12.94□□□□□ -0.34
DDX54-205ENST00000548786 STX19Q8N4C7 294 aa12.94□□□□□ -0.34
DDX54-205ENST00000548786 OR5D14Q8NGL3 314 aa12.94□□□□□ -0.34
DDX54-205ENST00000548786 GPR148Q8TDV2 347 aa12.94□□□□□ -0.34
DDX54-205ENST00000548786 SLC25A28Q96A46 364 aa12.94□□□□□ -0.34
DDX54-205ENST00000548786 GSTK1Q9Y2Q3 226 aa12.94□□□□□ -0.34
DDX54-205ENST00000548786 TMEM82A0PJX8 343 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms