RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 OR5V1Q9UGF6 321 aa4.18□□□□□ -1.74
APP-217ENST00000548570 SSR3Q9UNL2 185 aa4.18□□□□□ -1.74
APP-217ENST00000548570 PPP1R3CQ9UQK1 317 aa4.18□□□□□ -1.74
APP-217ENST00000548570 WIPI2Q9Y4P8 454 aa4.18□□□□□ -1.74
APP-217ENST00000548570 MAB21L2Q9Y586 359 aa4.18□□□□□ -1.74
APP-217ENST00000548570 ANK3Q12955 4377 aaKnown RBP4.18□□□□□ -1.74
APP-217ENST00000548570 DIDO1Q9BTC0 2240 aaKnown RBP4.18□□□□□ -1.74
APP-217ENST00000548570 ICE1Q9Y2F5 2266 aa4.18□□□□□ -1.74
APP-217ENST00000548570 ZNF469Q96JG9 3925 aaPredicted RBP4.17□□□□□ -1.74
APP-217ENST00000548570 POLQO75417 2590 aa4.17□□□□□ -1.74
APP-217ENST00000548570 PTPN13Q12923 2485 aa4.17□□□□□ -1.74
APP-217ENST00000548570 CACNA1CQ13936 2221 aa4.17□□□□□ -1.74
APP-217ENST00000548570 TMEM272A0A1B0GTI8 110 aa4.17□□□□□ -1.74
APP-217ENST00000548570 NOTOA8MTQ0 251 aa4.17□□□□□ -1.74
APP-217ENST00000548570 F5H0A9 414 aaPredicted RBP4.17□□□□□ -1.74
APP-217ENST00000548570 SLC17A2O00624 439 aa4.17□□□□□ -1.74
APP-217ENST00000548570 ARL6IP5O75915 188 aa4.17□□□□□ -1.74
APP-217ENST00000548570 FSTL3O95633 263 aa4.17□□□□□ -1.74
APP-217ENST00000548570 PAHP00439 452 aa4.17□□□□□ -1.74
APP-217ENST00000548570 HCKP08631 526 aa4.17□□□□□ -1.74
APP-217ENST00000548570 PSG2P11465 335 aa4.17□□□□□ -1.74
APP-217ENST00000548570 SELLP14151 372 aa4.17□□□□□ -1.74
APP-217ENST00000548570 TNFRSF1AP19438 455 aa4.17□□□□□ -1.74
APP-217ENST00000548570 DNASE1P24855 282 aa4.17□□□□□ -1.74
APP-217ENST00000548570 DUSP1P28562 367 aa4.17□□□□□ -1.74
APP-217ENST00000548570 SERPINB10P48595 397 aa4.17□□□□□ -1.74
APP-217ENST00000548570 POU3F4P49335 361 aa4.17□□□□□ -1.74
APP-217ENST00000548570 CEBPDP49716 269 aaPredicted RBP4.17□□□□□ -1.74
APP-217ENST00000548570 ATP1B3P54709 279 aa4.17□□□□□ -1.74
APP-217ENST00000548570 GMFBP60983 142 aa4.17□□□□□ -1.74
APP-217ENST00000548570 SEC61A1P61619 476 aaKnown RBP4.17□□□□□ -1.74
APP-217ENST00000548570 LMO4P61968 165 aa4.17□□□□□ -1.74
APP-217ENST00000548570 BTG1P62324 171 aa4.17□□□□□ -1.74
APP-217ENST00000548570 PPP3R1P63098 170 aa4.17□□□□□ -1.74
APP-217ENST00000548570 MXD1Q05195 221 aa4.17□□□□□ -1.74
APP-217ENST00000548570 KRTAP1-1Q07627 177 aa4.17□□□□□ -1.74
APP-217ENST00000548570 DGUOKQ16854 277 aa4.17□□□□□ -1.74
APP-217ENST00000548570 C2orf76Q3KRA6 126 aa4.17□□□□□ -1.74
APP-217ENST00000548570 PIGYQ3MUY2 71 aa4.17□□□□□ -1.74
APP-217ENST00000548570 Q5PR19 223 aa4.17□□□□□ -1.74
APP-217ENST00000548570 HES5Q5TA89 166 aa4.17□□□□□ -1.74
APP-217ENST00000548570 STUMQ69YW2 141 aa4.17□□□□□ -1.74
APP-217ENST00000548570 SFRP4Q6FHJ7 346 aaPredicted RBP4.17□□□□□ -1.74
APP-217ENST00000548570 SIGIRRQ6IA17 410 aa4.17□□□□□ -1.74
APP-217ENST00000548570 ELP2Q6IA86 826 aa4.17□□□□□ -1.74
APP-217ENST00000548570 Q6P435 159 aa4.17□□□□□ -1.74
APP-217ENST00000548570 SFXN4Q6P4A7 337 aa4.17□□□□□ -1.74
APP-217ENST00000548570 GLIPR1L1Q6UWM5 242 aa4.17□□□□□ -1.74
APP-217ENST00000548570 ACP7Q6ZNF0 438 aa4.17□□□□□ -1.74
APP-217ENST00000548570 Q6ZPA2 131 aa4.17□□□□□ -1.74
APP-217ENST00000548570 LRRC28Q86X40 367 aaPredicted RBP4.17□□□□□ -1.74
APP-217ENST00000548570 CDH26Q8IXH8 852 aa4.17□□□□□ -1.74
APP-217ENST00000548570 SAXO1Q8IYX7 474 aa4.17□□□□□ -1.74
APP-217ENST00000548570 CIARTQ8N365 385 aaPredicted RBP4.17□□□□□ -1.74
APP-217ENST00000548570 FTMTQ8N4E7 242 aa4.17□□□□□ -1.74
APP-217ENST00000548570 JAGN1Q8N5M9 183 aa4.17□□□□□ -1.74
APP-217ENST00000548570 NKAIN3Q8N8D7 197 aa4.17□□□□□ -1.74
APP-217ENST00000548570 ZSCAN4Q8NAM6 433 aaPredicted RBP4.17□□□□□ -1.74
APP-217ENST00000548570 DEFB108BQ8NET1 73 aa4.17□□□□□ -1.74
APP-217ENST00000548570 OR51D1Q8NGF3 324 aa4.17□□□□□ -1.74
APP-217ENST00000548570 OR5T2Q8NGG2 359 aa4.17□□□□□ -1.74
APP-217ENST00000548570 OR5H6Q8NGV6 325 aa4.17□□□□□ -1.74
APP-217ENST00000548570 OR10Z1Q8NGY1 313 aa4.17□□□□□ -1.74
APP-217ENST00000548570 OR51F2Q8NH61 342 aa4.17□□□□□ -1.74
APP-217ENST00000548570 ANGPTL6Q8NI99 470 aa4.17□□□□□ -1.74
APP-217ENST00000548570 TBC1D15Q8TC07 691 aa4.17□□□□□ -1.74
APP-217ENST00000548570 DYNC2LI1Q8TCX1 351 aa4.17□□□□□ -1.74
APP-217ENST00000548570 ERGIC1Q969X5 290 aa4.17□□□□□ -1.74
APP-217ENST00000548570 SLC25A46Q96AG3 418 aa4.17□□□□□ -1.74
APP-217ENST00000548570 SLC25A38Q96DW6 304 aa4.17□□□□□ -1.74
APP-217ENST00000548570 KCTD7Q96MP8 289 aa4.17□□□□□ -1.74
APP-217ENST00000548570 TECTBQ96PL2 329 aa4.17□□□□□ -1.74
APP-217ENST00000548570 HIST1H2AAQ96QV6 131 aa4.17□□□□□ -1.74
APP-217ENST00000548570 TMEM246Q9BRR3 403 aa4.17□□□□□ -1.74
APP-217ENST00000548570 UQCC2Q9BRT2 126 aa4.17□□□□□ -1.74
APP-217ENST00000548570 SLIRPQ9GZT3 109 aaKnown RBP4.17□□□□□ -1.74
APP-217ENST00000548570 EGLN1Q9GZT9 426 aa4.17□□□□□ -1.74
APP-217ENST00000548570 CHODLQ9H9P2 273 aa4.17□□□□□ -1.74
APP-217ENST00000548570 FN3KRPQ9HA64 309 aa4.17□□□□□ -1.74
APP-217ENST00000548570 SMURF1Q9HCE7 757 aa4.17□□□□□ -1.74
APP-217ENST00000548570 TCF7L1Q9HCS4 588 aa4.17□□□□□ -1.74
APP-217ENST00000548570 VCX3AQ9NNX9 186 aa4.17□□□□□ -1.74
APP-217ENST00000548570 HMG20AQ9NP66 347 aa4.17□□□□□ -1.74
APP-217ENST00000548570 ABCB9Q9NP78 766 aa4.17□□□□□ -1.74
APP-217ENST00000548570 DECR2Q9NUI1 292 aa4.17□□□□□ -1.74
APP-217ENST00000548570 C14orf119Q9NWQ9 140 aa4.17□□□□□ -1.74
APP-217ENST00000548570 IL36GQ9NZH8 169 aa4.17□□□□□ -1.74
APP-217ENST00000548570 RNF7Q9UBF6 113 aa4.17□□□□□ -1.74
APP-217ENST00000548570 SLC7A11Q9UPY5 501 aa4.17□□□□□ -1.74
APP-217ENST00000548570 MRPS28Q9Y2Q9 187 aaKnown RBP4.17□□□□□ -1.74
APP-217ENST00000548570 NOP16Q9Y3C1 178 aaKnown RBP4.17□□□□□ -1.74
APP-217ENST00000548570 NPTNQ9Y639 398 aa4.17□□□□□ -1.74
APP-217ENST00000548570 V9GY05 133 aa4.17□□□□□ -1.74
APP-217ENST00000548570 ITPR2Q14571 2701 aa4.17□□□□□ -1.74
APP-217ENST00000548570 BAHCC1Q9P281 2608 aa4.16□□□□□ -1.74
APP-217ENST00000548570 CADP27708 2225 aa4.16□□□□□ -1.74
APP-217ENST00000548570 PPIAL4EA0A075B759 164 aa4.16□□□□□ -1.74
APP-217ENST00000548570 TRAV24A0A0B4J272 114 aa4.16□□□□□ -1.74
APP-217ENST00000548570 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.16□□□□□ -1.74
APP-217ENST00000548570 TMEM82A0PJX8 343 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms