RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 IL36RNQ9UBH0 155 aa10.81□□□□□ -0.68
CPSF6-204ENST00000547486 ENOPH1Q9UHY7 261 aa10.81□□□□□ -0.68
CPSF6-204ENST00000547486 FOXJ3Q9UPW0 622 aa10.81□□□□□ -0.68
CPSF6-204ENST00000547486 IGKV1-9A0A0C4DH69 117 aa10.8□□□□□ -0.68
CPSF6-204ENST00000547486 ENTPD6O75354 484 aa10.8□□□□□ -0.68
CPSF6-204ENST00000547486 ATP5HO75947 161 aa10.8□□□□□ -0.68
CPSF6-204ENST00000547486 CALCBP10092 127 aa10.8□□□□□ -0.68
CPSF6-204ENST00000547486 NPBWR2P48146 333 aa10.8□□□□□ -0.68
CPSF6-204ENST00000547486 LGALS4P56470 323 aa10.8□□□□□ -0.68
CPSF6-204ENST00000547486 TMED1Q13445 227 aa10.8□□□□□ -0.68
CPSF6-204ENST00000547486 PLA1AQ53H76 456 aa10.8□□□□□ -0.68
CPSF6-204ENST00000547486 CCBE1Q6UXH8 406 aaPredicted RBP10.8□□□□□ -0.68
CPSF6-204ENST00000547486 TCF23Q7RTU1 214 aa10.8□□□□□ -0.68
CPSF6-204ENST00000547486 EGFL6Q8IUX8 553 aa10.8□□□□□ -0.68
CPSF6-204ENST00000547486 OR52N4Q8NGI2 321 aa10.8□□□□□ -0.68
CPSF6-204ENST00000547486 ADAT3Q96EY9 351 aaPredicted RBP10.8□□□□□ -0.68
CPSF6-204ENST00000547486 ADI1Q9BV57 179 aa10.8□□□□□ -0.68
CPSF6-204ENST00000547486 CHST5Q9GZS9 411 aa10.8□□□□□ -0.68
CPSF6-204ENST00000547486 FRRS1LQ9P0K9 344 aa10.8□□□□□ -0.68
CPSF6-204ENST00000547486 GNG8Q9UK08 70 aa10.8□□□□□ -0.68
CPSF6-204ENST00000547486 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.8□□□□□ -0.68
CPSF6-204ENST00000547486 LOC107986453A0A1B0GWG9 222 aa10.79□□□□□ -0.68
CPSF6-204ENST00000547486 hCG_1809904A0A1W2PP81 198 aa10.79□□□□□ -0.68
CPSF6-204ENST00000547486 A0A1W2PPE2 198 aa10.79□□□□□ -0.68
CPSF6-204ENST00000547486 A0A1W2PR64 198 aa10.79□□□□□ -0.68
CPSF6-204ENST00000547486 A0A1W2PRV1 198 aa10.79□□□□□ -0.68
CPSF6-204ENST00000547486 E9PQ18 207 aa10.79□□□□□ -0.68
CPSF6-204ENST00000547486 J3QRE1 110 aa10.79□□□□□ -0.68
CPSF6-204ENST00000547486 IGHA1P01876 353 aa10.79□□□□□ -0.68
CPSF6-204ENST00000547486 ZNF728P0DKX0 622 aa10.79□□□□□ -0.68
CPSF6-204ENST00000547486 DUSP1P28562 367 aa10.79□□□□□ -0.68
CPSF6-204ENST00000547486 EDDM3BP56851 147 aa10.79□□□□□ -0.68
CPSF6-204ENST00000547486 NANOS3P60323 173 aaKnown RBP10.79□□□□□ -0.68
CPSF6-204ENST00000547486 RNF144BQ7Z419 303 aa10.79□□□□□ -0.68
CPSF6-204ENST00000547486 C1QL4Q86Z23 238 aa10.79□□□□□ -0.68
CPSF6-204ENST00000547486 TPRX1Q8N7U7 411 aa10.79□□□□□ -0.68
CPSF6-204ENST00000547486 C11orf44Q8N8P7 122 aa10.79□□□□□ -0.68
CPSF6-204ENST00000547486 OR2G2Q8NGZ5 317 aa10.79□□□□□ -0.68
CPSF6-204ENST00000547486 PYDC1Q8WXC3 89 aa10.79□□□□□ -0.68
CPSF6-204ENST00000547486 RFKQ969G6 155 aa10.79□□□□□ -0.68
CPSF6-204ENST00000547486 RBFOX1Q9NWB1 397 aaKnown RBP10.79□□□□□ -0.68
CPSF6-204ENST00000547486 AASSQ9UDR5 926 aa10.79□□□□□ -0.68
CPSF6-204ENST00000547486 VGLL3A8MV65 326 aa10.78□□□□□ -0.68
CPSF6-204ENST00000547486 ODF3BA8MYP8 253 aa10.78□□□□□ -0.68
CPSF6-204ENST00000547486 PSPNO60542 156 aa10.78□□□□□ -0.68
CPSF6-204ENST00000547486 GATBO75879 557 aaKnown RBP10.78□□□□□ -0.68
CPSF6-204ENST00000547486 SERPINA3P01011 423 aa10.78□□□□□ -0.68
CPSF6-204ENST00000547486 ARG1P05089 322 aa10.78□□□□□ -0.68
CPSF6-204ENST00000547486 ALPLP05186 524 aa10.78□□□□□ -0.68
CPSF6-204ENST00000547486 CSF1P09603 554 aa10.78□□□□□ -0.68
CPSF6-204ENST00000547486 IGHV1-8P0DP01 117 aa10.78□□□□□ -0.68
CPSF6-204ENST00000547486 JUNBP17275 347 aaPredicted RBP10.78□□□□□ -0.68
CPSF6-204ENST00000547486 BCL3P20749 454 aa10.78□□□□□ -0.68
CPSF6-204ENST00000547486 OR12D2P58182 307 aa10.78□□□□□ -0.68
CPSF6-204ENST00000547486 CDC42P60953 191 aa10.78□□□□□ -0.68
CPSF6-204ENST00000547486 EDDM3AQ14507 147 aa10.78□□□□□ -0.68
CPSF6-204ENST00000547486 HABP2Q14520 560 aaPredicted RBP10.78□□□□□ -0.68
CPSF6-204ENST00000547486 HERPUD1Q15011 391 aa10.78□□□□□ -0.68
CPSF6-204ENST00000547486 SSX2Q16385 188 aa10.78□□□□□ -0.68
CPSF6-204ENST00000547486 GDPD3Q7L5L3 318 aa10.78□□□□□ -0.68
CPSF6-204ENST00000547486 OR8H2Q8N162 312 aa10.78□□□□□ -0.68
CPSF6-204ENST00000547486 CCDC54Q8NEL0 328 aa10.78□□□□□ -0.68
CPSF6-204ENST00000547486 OR11H6Q8NGC7 330 aa10.78□□□□□ -0.68
CPSF6-204ENST00000547486 OR4C13Q8NGP0 309 aa10.78□□□□□ -0.68
CPSF6-204ENST00000547486 TRUB1Q8WWH5 349 aaKnown RBP10.78□□□□□ -0.68
CPSF6-204ENST00000547486 CFHR4Q92496 578 aa10.78□□□□□ -0.68
CPSF6-204ENST00000547486 FGGYQ96C11 551 aa10.78□□□□□ -0.68
CPSF6-204ENST00000547486 C10orf35Q96D05 121 aa10.78□□□□□ -0.68
CPSF6-204ENST00000547486 BORCS8Q96FH0 119 aa10.78□□□□□ -0.68
CPSF6-204ENST00000547486 SNX22Q96L94 193 aa10.78□□□□□ -0.68
CPSF6-204ENST00000547486 CHST6Q9GZX3 395 aa10.78□□□□□ -0.68
CPSF6-204ENST00000547486 A6NDX4 124 aa10.77□□□□□ -0.69
CPSF6-204ENST00000547486 H3BNX3 289 aa10.77□□□□□ -0.69
CPSF6-204ENST00000547486 HAND1O96004 215 aa10.77□□□□□ -0.69
CPSF6-204ENST00000547486 UBCP0CG48 685 aaKnown RBP10.77□□□□□ -0.69
CPSF6-204ENST00000547486 ATF1P18846 271 aa10.77□□□□□ -0.69
CPSF6-204ENST00000547486 RBP2P50120 134 aa10.77□□□□□ -0.69
CPSF6-204ENST00000547486 MTCP1P56278 107 aa10.77□□□□□ -0.69
CPSF6-204ENST00000547486 MEF2CQ06413 473 aaPredicted RBP10.77□□□□□ -0.69
CPSF6-204ENST00000547486 FAM189A2Q15884 450 aa10.77□□□□□ -0.69
CPSF6-204ENST00000547486 C2orf68Q2NKX9 166 aa10.77□□□□□ -0.69
CPSF6-204ENST00000547486 ZIK1Q3SY52 487 aaPredicted RBP10.77□□□□□ -0.69
CPSF6-204ENST00000547486 SLC25A30Q5SVS4 291 aa10.77□□□□□ -0.69
CPSF6-204ENST00000547486 ZNF626Q68DY1 528 aa10.77□□□□□ -0.69
CPSF6-204ENST00000547486 Q6ZTK2 550 aa10.77□□□□□ -0.69
CPSF6-204ENST00000547486 TMEM219Q86XT9 240 aa10.77□□□□□ -0.69
CPSF6-204ENST00000547486 KLHDC1Q8N7A1 406 aa10.77□□□□□ -0.69
CPSF6-204ENST00000547486 DNAAF1Q8NEP3 725 aa10.77□□□□□ -0.69
CPSF6-204ENST00000547486 OR4S1Q8NGB4 309 aa10.77□□□□□ -0.69
CPSF6-204ENST00000547486 OR13D1Q8NGV5 346 aa10.77□□□□□ -0.69
CPSF6-204ENST00000547486 OR10AC1Q8NH08 325 aa10.77□□□□□ -0.69
CPSF6-204ENST00000547486 OR2T6Q8NHC8 308 aa10.77□□□□□ -0.69
CPSF6-204ENST00000547486 PP6455Q8WZ26 134 aa10.77□□□□□ -0.69
CPSF6-204ENST00000547486 EMG1Q92979 244 aaKnown RBP10.77□□□□□ -0.69
CPSF6-204ENST00000547486 MALSU1Q96EH3 234 aa10.77□□□□□ -0.69
CPSF6-204ENST00000547486 RNFT2Q96EX2 444 aa10.77□□□□□ -0.69
CPSF6-204ENST00000547486 HRASLS5Q96KN8 279 aa10.77□□□□□ -0.69
CPSF6-204ENST00000547486 NKX3-1Q99801 234 aaPredicted RBP10.77□□□□□ -0.69
CPSF6-204ENST00000547486 RANBP3Q9H6Z4 567 aaPredicted RBP10.77□□□□□ -0.69
CPSF6-204ENST00000547486 ZNF702PQ9H963 129 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms