RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 SMURF1Q9HCE7 757 aa13.97□□□□□ -0.17
CCDC38-203ENST00000546803 NOX4Q9NPH5 578 aa13.97□□□□□ -0.17
CCDC38-203ENST00000546803 MMP26Q9NRE1 261 aa13.97□□□□□ -0.17
CCDC38-203ENST00000546803 INSIG2Q9Y5U4 225 aa13.97□□□□□ -0.17
CCDC38-203ENST00000546803 VPS13CQ709C8 3753 aa13.96□□□□□ -0.17
CCDC38-203ENST00000546803 TRAV8-7A0A075B6U6 113 aa13.96□□□□□ -0.17
CCDC38-203ENST00000546803 IGHV2-70DA0A0C4DH43 119 aa13.96□□□□□ -0.17
CCDC38-203ENST00000546803 A0A1W2PPK0 400 aa13.96□□□□□ -0.17
CCDC38-203ENST00000546803 MEGF11A6BM72 1044 aa13.96□□□□□ -0.17
CCDC38-203ENST00000546803 F8VVB4 439 aa13.96□□□□□ -0.17
CCDC38-203ENST00000546803 F8VWA3 439 aa13.96□□□□□ -0.17
CCDC38-203ENST00000546803 ENSAO43768 121 aaKnown RBP13.96□□□□□ -0.17
CCDC38-203ENST00000546803 ANGPTL7O43827 346 aa13.96□□□□□ -0.17
CCDC38-203ENST00000546803 SC5DO75845 299 aa13.96□□□□□ -0.17
CCDC38-203ENST00000546803 LIPFP07098 398 aa13.96□□□□□ -0.17
CCDC38-203ENST00000546803 BCL3P20749 454 aa13.96□□□□□ -0.17
CCDC38-203ENST00000546803 ZNF93P35789 620 aaPredicted RBP13.96□□□□□ -0.17
CCDC38-203ENST00000546803 NPBWR2P48146 333 aa13.96□□□□□ -0.17
CCDC38-203ENST00000546803 BMXP51813 675 aa13.96□□□□□ -0.17
CCDC38-203ENST00000546803 CHRFAM7AQ494W8 412 aa13.96□□□□□ -0.17
CCDC38-203ENST00000546803 ARMCX4Q5H9R4 360 aa13.96□□□□□ -0.17
CCDC38-203ENST00000546803 UBE2UQ5VVX9 321 aa13.96□□□□□ -0.17
CCDC38-203ENST00000546803 RNF144BQ7Z419 303 aa13.96□□□□□ -0.17
CCDC38-203ENST00000546803 FAM58AQ8N1B3 248 aa13.96□□□□□ -0.17
CCDC38-203ENST00000546803 BATF2Q8N1L9 274 aa13.96□□□□□ -0.17
CCDC38-203ENST00000546803 PNLDC1Q8NA58 520 aaKnown RBP13.96□□□□□ -0.17
CCDC38-203ENST00000546803 OR5D18Q8NGL1 313 aa13.96□□□□□ -0.17
CCDC38-203ENST00000546803 DACT3Q96B18 629 aaPredicted RBP13.96□□□□□ -0.17
CCDC38-203ENST00000546803 ORAI1Q96D31 301 aa13.96□□□□□ -0.17
CCDC38-203ENST00000546803 BEX2Q9BXY8 128 aa13.96□□□□□ -0.17
CCDC38-203ENST00000546803 MAB21L2Q9Y586 359 aa13.96□□□□□ -0.17
CCDC38-203ENST00000546803 HIVEP2P31629 2446 aa13.96□□□□□ -0.17
CCDC38-203ENST00000546803 IGKV1-12A0A0C4DH73 117 aa13.95□□□□□ -0.18
CCDC38-203ENST00000546803 KIR2DS1A0A191URI9 304 aa13.95□□□□□ -0.18
CCDC38-203ENST00000546803 A0A1B0GW55 424 aa13.95□□□□□ -0.18
CCDC38-203ENST00000546803 GABRPO00591 440 aa13.95□□□□□ -0.18
CCDC38-203ENST00000546803 INMTO95050 263 aa13.95□□□□□ -0.18
CCDC38-203ENST00000546803 IGKV1D-12P01611 117 aa13.95□□□□□ -0.18
CCDC38-203ENST00000546803 DUX4L2P0CJ85 424 aa13.95□□□□□ -0.18
CCDC38-203ENST00000546803 DUX4L3P0CJ86 424 aa13.95□□□□□ -0.18
CCDC38-203ENST00000546803 DUX4L4P0CJ87 422 aa13.95□□□□□ -0.18
CCDC38-203ENST00000546803 DUX4L5P0CJ88 424 aa13.95□□□□□ -0.18
CCDC38-203ENST00000546803 DUX4L6P0CJ89 424 aa13.95□□□□□ -0.18
CCDC38-203ENST00000546803 DUX4L7P0CJ90 424 aa13.95□□□□□ -0.18
CCDC38-203ENST00000546803 GABRA5P31644 462 aa13.95□□□□□ -0.18
CCDC38-203ENST00000546803 CAV3P56539 151 aa13.95□□□□□ -0.18
CCDC38-203ENST00000546803 IKZF1Q13422 519 aa13.95□□□□□ -0.18
CCDC38-203ENST00000546803 DGUOKQ16854 277 aa13.95□□□□□ -0.18
CCDC38-203ENST00000546803 DUX4L9Q6RFH8 374 aaPredicted RBP13.95□□□□□ -0.18
CCDC38-203ENST00000546803 CEACAM19Q7Z692 300 aa13.95□□□□□ -0.18
CCDC38-203ENST00000546803 ZNF561Q8N587 486 aa13.95□□□□□ -0.18
CCDC38-203ENST00000546803 CD177Q8N6Q3 437 aa13.95□□□□□ -0.18
CCDC38-203ENST00000546803 NKAIN3Q8N8D7 197 aa13.95□□□□□ -0.18
CCDC38-203ENST00000546803 TNFAIP8L1Q8WVP5 186 aa13.95□□□□□ -0.18
CCDC38-203ENST00000546803 ST8SIA4Q92187 359 aa13.95□□□□□ -0.18
CCDC38-203ENST00000546803 TMEM203Q969S6 136 aa13.95□□□□□ -0.18
CCDC38-203ENST00000546803 DMRTB1Q96MA1 342 aa13.95□□□□□ -0.18
CCDC38-203ENST00000546803 NUDT16L1Q9BRJ7 211 aaKnown RBP13.95□□□□□ -0.18
CCDC38-203ENST00000546803 TMPRSS13Q9BYE2 586 aa13.95□□□□□ -0.18
CCDC38-203ENST00000546803 C7orf69Q9H7B7 122 aa13.95□□□□□ -0.18
CCDC38-203ENST00000546803 TCF7L1Q9HCS4 588 aa13.95□□□□□ -0.18
CCDC38-203ENST00000546803 HMG20AQ9NP66 347 aa13.95□□□□□ -0.18
CCDC38-203ENST00000546803 RBFOX1Q9NWB1 397 aaKnown RBP13.95□□□□□ -0.18
CCDC38-203ENST00000546803 DUX4Q9UBX2 424 aa13.95□□□□□ -0.18
CCDC38-203ENST00000546803 SLC25A10Q9UBX3 287 aaPredicted RBP13.95□□□□□ -0.18
CCDC38-203ENST00000546803 GLS2Q9UI32 602 aa13.95□□□□□ -0.18
CCDC38-203ENST00000546803 SF3B6Q9Y3B4 125 aaKnown RBP13.95□□□□□ -0.18
CCDC38-203ENST00000546803 C22orf46C9J442 243 aa13.94□□□□□ -0.18
CCDC38-203ENST00000546803 FCN3O75636 299 aa13.94□□□□□ -0.18
CCDC38-203ENST00000546803 RGS9O75916 674 aaPredicted RBP13.94□□□□□ -0.18
CCDC38-203ENST00000546803 TNFAIP8O95379 198 aa13.94□□□□□ -0.18
CCDC38-203ENST00000546803 CHRM2P08172 466 aa13.94□□□□□ -0.18
CCDC38-203ENST00000546803 UCHL1P09936 223 aa13.94□□□□□ -0.18
CCDC38-203ENST00000546803 PTGFRP43088 359 aa13.94□□□□□ -0.18
CCDC38-203ENST00000546803 MTNR1BP49286 362 aa13.94□□□□□ -0.18
CCDC38-203ENST00000546803 RPS25P62851 125 aaKnown RBP13.94□□□□□ -0.18
CCDC38-203ENST00000546803 PAX8Q06710 450 aa13.94□□□□□ -0.18
CCDC38-203ENST00000546803 INSL4Q14641 139 aa13.94□□□□□ -0.18
CCDC38-203ENST00000546803 ZNF146Q15072 292 aa13.94□□□□□ -0.18
CCDC38-203ENST00000546803 HSD17B12Q53GQ0 312 aa13.94□□□□□ -0.18
CCDC38-203ENST00000546803 SPIN3Q5JUX0 258 aa13.94□□□□□ -0.18
CCDC38-203ENST00000546803 ELP2Q6IA86 826 aa13.94□□□□□ -0.18
CCDC38-203ENST00000546803 ASCL4Q6XD76 172 aa13.94□□□□□ -0.18
CCDC38-203ENST00000546803 BTN2A1Q7KYR7 527 aa13.94□□□□□ -0.18
CCDC38-203ENST00000546803 MRI1Q9BV20 369 aa13.94□□□□□ -0.18
CCDC38-203ENST00000546803 FAM234AQ9H0X4 552 aa13.94□□□□□ -0.18
CCDC38-203ENST00000546803 OR14J1Q9UGF5 321 aa13.94□□□□□ -0.18
CCDC38-203ENST00000546803 ARL6IP5O75915 188 aa13.93□□□□□ -0.18
CCDC38-203ENST00000546803 TFF1P04155 84 aa13.93□□□□□ -0.18
CCDC38-203ENST00000546803 MAS1P04201 325 aa13.93□□□□□ -0.18
CCDC38-203ENST00000546803 SFTPBP07988 381 aa13.93□□□□□ -0.18
CCDC38-203ENST00000546803 SELLP14151 372 aa13.93□□□□□ -0.18
CCDC38-203ENST00000546803 PRKACAP17612 351 aa13.93□□□□□ -0.18
CCDC38-203ENST00000546803 PSMB9P28065 219 aa13.93□□□□□ -0.18
CCDC38-203ENST00000546803 SSX1Q16384 188 aa13.93□□□□□ -0.18
CCDC38-203ENST00000546803 TMEM91Q6ZNR0 172 aa13.93□□□□□ -0.18
CCDC38-203ENST00000546803 ZNRF1Q8ND25 227 aa13.93□□□□□ -0.18
CCDC38-203ENST00000546803 TMEM185AQ8NFB2 350 aa13.93□□□□□ -0.18
CCDC38-203ENST00000546803 FAM192AQ9GZU8 254 aa13.93□□□□□ -0.18
CCDC38-203ENST00000546803 PCDHB16Q9NRJ7 776 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms