RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 PCGF1Q9BSM1 259 aa6.1□□□□□ -1.43
CPSF7-224ENST00000544990 PKIBQ9C010 78 aa6.1□□□□□ -1.43
CPSF7-224ENST00000544990 CHST5Q9GZS9 411 aa6.1□□□□□ -1.43
CPSF7-224ENST00000544990 COMMD4Q9H0A8 199 aa6.1□□□□□ -1.43
CPSF7-224ENST00000544990 NEK6Q9HC98 313 aa6.1□□□□□ -1.43
CPSF7-224ENST00000544990 FGF20Q9NP95 211 aaPredicted RBP6.1□□□□□ -1.43
CPSF7-224ENST00000544990 CHCHD3Q9NX63 227 aaKnown RBP6.1□□□□□ -1.43
CPSF7-224ENST00000544990 SLC25A10Q9UBX3 287 aaPredicted RBP6.1□□□□□ -1.43
CPSF7-224ENST00000544990 RPUSD1Q9UJJ7 312 aaKnown RBP6.1□□□□□ -1.43
CPSF7-224ENST00000544990 HHLA2Q9UM44 414 aa6.1□□□□□ -1.43
CPSF7-224ENST00000544990 HSPE1-MOB4S4R3N1 261 aa6.1□□□□□ -1.43
CPSF7-224ENST00000544990 TRAV40A0A0B4J280 105 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 TMEM212A6NML5 194 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 H0YAE9 185 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 CASQ2O14958 399 aaPredicted RBP6.09□□□□□ -1.43
CPSF7-224ENST00000544990 SIGLEC5O15389 551 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 SYNGR1O43759 233 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 WBP4O75554 376 aaKnown RBP6.09□□□□□ -1.43
CPSF7-224ENST00000544990 NXPH2O95156 264 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 VENTXO95231 258 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 CLIC3O95833 236 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 CYB5AP00167 134 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 ACAA1P09110 424 aaPredicted RBP6.09□□□□□ -1.43
CPSF7-224ENST00000544990 PGA5P0DJD9 388 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 PSG2P11465 335 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 NDUFB7P17568 137 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 MYL12AP19105 171 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 PRKACBP22694 351 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 MPZP25189 248 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 CAPGP40121 348 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 RBP2P50120 134 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 CAV3P56539 151 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 NANOS3P60323 173 aaKnown RBP6.09□□□□□ -1.43
CPSF7-224ENST00000544990 ARF6P62330 175 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 ADARB1P78563 741 aaKnown RBP6.09□□□□□ -1.43
CPSF7-224ENST00000544990 IL24Q13007 206 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 UBE2V2Q15819 145 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 SMN1Q16637 294 aaKnown RBP6.09□□□□□ -1.43
CPSF7-224ENST00000544990 KLF17Q5JT82 389 aaPredicted RBP6.09□□□□□ -1.43
CPSF7-224ENST00000544990 OGFRL1Q5TC84 451 aaPredicted RBP6.09□□□□□ -1.43
CPSF7-224ENST00000544990 TMPRSS11AQ6ZMR5 421 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 ACP7Q6ZNF0 438 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 UTS2BQ765I0 119 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 ANGPTL5Q86XS5 388 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 PHC2Q8IXK0 858 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 C8orf59Q8N0T1 100 aaPredicted RBP6.09□□□□□ -1.43
CPSF7-224ENST00000544990 ZNF561Q8N587 486 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 FAM216BQ8N7L0 139 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 DNAAF1Q8NEP3 725 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 OR13C3Q8NGS6 347 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 OR5AK2Q8NH90 309 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 CNIH3Q8TBE1 160 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 NPRL2Q8WTW4 380 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 C22orf15Q8WYQ4 148 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 H1FXQ92522 213 aaKnown RBP6.09□□□□□ -1.43
CPSF7-224ENST00000544990 FGGYQ96C11 551 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 WDFY2Q96P53 400 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 GAFA1Q96PS6 74 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 DCTN5Q9BTE1 182 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 C19orf24Q9BVV8 132 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 ISG20L2Q9H9L3 353 aaKnown RBP6.09□□□□□ -1.43
CPSF7-224ENST00000544990 ZNF69Q9UC07 566 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 CAB39Q9Y376 341 aaPredicted RBP6.09□□□□□ -1.43
CPSF7-224ENST00000544990 EXOSC1Q9Y3B2 195 aaKnown RBP6.09□□□□□ -1.43
CPSF7-224ENST00000544990 KPTNQ9Y664 436 aa6.09□□□□□ -1.43
CPSF7-224ENST00000544990 ANK3Q12955 4377 aaKnown RBP6.09□□□□□ -1.43
CPSF7-224ENST00000544990 IGKV1D-17A0A075B6S4 117 aa6.08□□□□□ -1.44
CPSF7-224ENST00000544990 TRBV2A0A0J9YWF9 115 aa6.08□□□□□ -1.44
CPSF7-224ENST00000544990 A0A1B0GW55 424 aa6.08□□□□□ -1.44
CPSF7-224ENST00000544990 RFPL4AA6NLU0 287 aa6.08□□□□□ -1.44
CPSF7-224ENST00000544990 OR4C45A6NMZ5 311 aa6.08□□□□□ -1.44
CPSF7-224ENST00000544990 RFPL4AL1F8VTS6 287 aa6.08□□□□□ -1.44
CPSF7-224ENST00000544990 SLC1A7O00341 560 aa6.08□□□□□ -1.44
CPSF7-224ENST00000544990 PLATP00750 562 aa6.08□□□□□ -1.44
CPSF7-224ENST00000544990 DUX4L2P0CJ85 424 aa6.08□□□□□ -1.44
CPSF7-224ENST00000544990 DUX4L3P0CJ86 424 aa6.08□□□□□ -1.44
CPSF7-224ENST00000544990 DUX4L4P0CJ87 422 aa6.08□□□□□ -1.44
CPSF7-224ENST00000544990 DUX4L5P0CJ88 424 aa6.08□□□□□ -1.44
CPSF7-224ENST00000544990 DUX4L6P0CJ89 424 aa6.08□□□□□ -1.44
CPSF7-224ENST00000544990 DUX4L7P0CJ90 424 aa6.08□□□□□ -1.44
CPSF7-224ENST00000544990 IGHV4-38-2P0DP08 117 aa6.08□□□□□ -1.44
CPSF7-224ENST00000544990 ATF1P18846 271 aa6.08□□□□□ -1.44
CPSF7-224ENST00000544990 AZGP1P25311 298 aaKnown RBP6.08□□□□□ -1.44
CPSF7-224ENST00000544990 PRDX2P32119 198 aa6.08□□□□□ -1.44
CPSF7-224ENST00000544990 MTNR1BP49286 362 aa6.08□□□□□ -1.44
CPSF7-224ENST00000544990 CAPZA1P52907 286 aa6.08□□□□□ -1.44
CPSF7-224ENST00000544990 ELF3P78545 371 aaPredicted RBP6.08□□□□□ -1.44
CPSF7-224ENST00000544990 CD83Q01151 205 aa6.08□□□□□ -1.44
CPSF7-224ENST00000544990 SLC34A1Q06495 639 aa6.08□□□□□ -1.44
CPSF7-224ENST00000544990 BLMHQ13867 455 aa6.08□□□□□ -1.44
CPSF7-224ENST00000544990 DGUOKQ16854 277 aa6.08□□□□□ -1.44
CPSF7-224ENST00000544990 CCDC58Q4VC31 144 aa6.08□□□□□ -1.44
CPSF7-224ENST00000544990 RPL22L1Q6P5R6 122 aaKnown RBP6.08□□□□□ -1.44
CPSF7-224ENST00000544990 DUX4L9Q6RFH8 374 aaPredicted RBP6.08□□□□□ -1.44
CPSF7-224ENST00000544990 FIP1L1Q6UN15 594 aaKnown RBP6.08□□□□□ -1.44
CPSF7-224ENST00000544990 C9orf139Q6ZV77 190 aa6.08□□□□□ -1.44
CPSF7-224ENST00000544990 CALHM1Q8IU99 346 aa6.08□□□□□ -1.44
CPSF7-224ENST00000544990 SERPINA12Q8IW75 414 aa6.08□□□□□ -1.44
CPSF7-224ENST00000544990 MKXQ8IYA7 352 aa6.08□□□□□ -1.44
CPSF7-224ENST00000544990 Q8IYB0 196 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms