RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 OPALINQ96PE5 141 aa9.38□□□□□ -0.91
YBX3-216ENST00000544622 FAM234AQ9H0X4 552 aa9.38□□□□□ -0.91
YBX3-216ENST00000544622 BABAM2Q9NXR7 383 aa9.38□□□□□ -0.91
YBX3-216ENST00000544622 CLEC2DQ9UHP7 191 aa9.38□□□□□ -0.91
YBX3-216ENST00000544622 TRBV23-1A0A0A0MS06 115 aa9.37□□□□□ -0.91
YBX3-216ENST00000544622 IGHV1-69DA0A0B4J2H0 117 aa9.37□□□□□ -0.91
YBX3-216ENST00000544622 IGKV1-12A0A0C4DH73 117 aa9.37□□□□□ -0.91
YBX3-216ENST00000544622 TRBV2A0A0J9YWF9 115 aa9.37□□□□□ -0.91
YBX3-216ENST00000544622 MDFIC2A0A1B0GVS7 189 aa9.37□□□□□ -0.91
YBX3-216ENST00000544622 DNAJC9-AS1A6NH13 148 aa9.37□□□□□ -0.91
YBX3-216ENST00000544622 H0YJX3 145 aa9.37□□□□□ -0.91
YBX3-216ENST00000544622 K7N7A8 449 aa9.37□□□□□ -0.91
YBX3-216ENST00000544622 M0R1W7 72 aa9.37□□□□□ -0.91
YBX3-216ENST00000544622 IGKV1D-12P01611 117 aa9.37□□□□□ -0.91
YBX3-216ENST00000544622 IGHV1-69P01742 117 aa9.37□□□□□ -0.91
YBX3-216ENST00000544622 TK1P04183 234 aa9.37□□□□□ -0.91
YBX3-216ENST00000544622 RNASE1P07998 156 aaKnown RBP9.37□□□□□ -0.91
YBX3-216ENST00000544622 ZNF20P17024 532 aa9.37□□□□□ -0.91
YBX3-216ENST00000544622 NDUFB7P17568 137 aa9.37□□□□□ -0.91
YBX3-216ENST00000544622 CEBPDP49716 269 aaPredicted RBP9.37□□□□□ -0.91
YBX3-216ENST00000544622 ATP1B3P54709 279 aa9.37□□□□□ -0.91
YBX3-216ENST00000544622 ZNF146Q15072 292 aa9.37□□□□□ -0.91
YBX3-216ENST00000544622 SLC9A3R2Q15599 337 aa9.37□□□□□ -0.91
YBX3-216ENST00000544622 DEFB112Q30KQ8 113 aa9.37□□□□□ -0.91
YBX3-216ENST00000544622 RUSC1-AS1Q66K80 236 aa9.37□□□□□ -0.91
YBX3-216ENST00000544622 RBMS3Q6XE24 437 aaKnown RBP9.37□□□□□ -0.91
YBX3-216ENST00000544622 LHFPL2Q6ZUX7 228 aa9.37□□□□□ -0.91
YBX3-216ENST00000544622 C8orf59Q8N0T1 100 aaPredicted RBP9.37□□□□□ -0.91
YBX3-216ENST00000544622 OR5D14Q8NGL3 314 aa9.37□□□□□ -0.91
YBX3-216ENST00000544622 OR13C3Q8NGS6 347 aa9.37□□□□□ -0.91
YBX3-216ENST00000544622 OR52N1Q8NH53 320 aa9.37□□□□□ -0.91
YBX3-216ENST00000544622 GATAD2BQ8WXI9 593 aa9.37□□□□□ -0.91
YBX3-216ENST00000544622 H1FXQ92522 213 aaKnown RBP9.37□□□□□ -0.91
YBX3-216ENST00000544622 LHX4Q969G2 390 aa9.37□□□□□ -0.91
YBX3-216ENST00000544622 SLAMF9Q96A28 289 aa9.37□□□□□ -0.91
YBX3-216ENST00000544622 ZCCHC4Q9H5U6 513 aa9.37□□□□□ -0.91
YBX3-216ENST00000544622 ELL3Q9HB65 397 aaPredicted RBP9.37□□□□□ -0.91
YBX3-216ENST00000544622 NOX4Q9NPH5 578 aa9.37□□□□□ -0.91
YBX3-216ENST00000544622 C19orf12Q9NSK7 152 aa9.37□□□□□ -0.91
YBX3-216ENST00000544622 FKBP14Q9NWM8 211 aa9.37□□□□□ -0.91
YBX3-216ENST00000544622 CNOT2Q9NZN8 540 aaKnown RBP9.37□□□□□ -0.91
YBX3-216ENST00000544622 PSORS1C1Q9UIG5 152 aa9.37□□□□□ -0.91
YBX3-216ENST00000544622 EXOSC1Q9Y3B2 195 aaKnown RBP9.37□□□□□ -0.91
YBX3-216ENST00000544622 FBN3Q75N90 2809 aa9.37□□□□□ -0.91
YBX3-216ENST00000544622 RNASEK-C17orf49H0YIS7 233 aa9.36□□□□□ -0.91
YBX3-216ENST00000544622 SLC1A7O00341 560 aa9.36□□□□□ -0.91
YBX3-216ENST00000544622 SULT1B1O43704 296 aa9.36□□□□□ -0.91
YBX3-216ENST00000544622 XPNPEP2O43895 674 aa9.36□□□□□ -0.91
YBX3-216ENST00000544622 KDM4BO94953 1096 aa9.36□□□□□ -0.91
YBX3-216ENST00000544622 CHRM2P08172 466 aa9.36□□□□□ -0.91
YBX3-216ENST00000544622 C21orf33P30042 268 aaPredicted RBP9.36□□□□□ -0.91
YBX3-216ENST00000544622 ZP1P60852 638 aa9.36□□□□□ -0.91
YBX3-216ENST00000544622 COL10A1Q03692 680 aa9.36□□□□□ -0.91
YBX3-216ENST00000544622 ST3GAL4Q11206 333 aa9.36□□□□□ -0.91
YBX3-216ENST00000544622 BAMBIQ13145 260 aa9.36□□□□□ -0.91
YBX3-216ENST00000544622 DOC2BQ14184 412 aa9.36□□□□□ -0.91
YBX3-216ENST00000544622 TMEM200BQ69YZ2 307 aa9.36□□□□□ -0.91
YBX3-216ENST00000544622 DMKNQ6E0U4 476 aaPredicted RBP9.36□□□□□ -0.91
YBX3-216ENST00000544622 HCP5Q6MZN7 132 aa9.36□□□□□ -0.91
YBX3-216ENST00000544622 TMPRSS11AQ6ZMR5 421 aa9.36□□□□□ -0.91
YBX3-216ENST00000544622 C17orf107Q6ZR85 190 aa9.36□□□□□ -0.91
YBX3-216ENST00000544622 MKXQ8IYA7 352 aa9.36□□□□□ -0.91
YBX3-216ENST00000544622 Q8IYB0 196 aa9.36□□□□□ -0.91
YBX3-216ENST00000544622 CMTM4Q8IZR5 234 aa9.36□□□□□ -0.91
YBX3-216ENST00000544622 TMEM185AQ8NFB2 350 aa9.36□□□□□ -0.91
YBX3-216ENST00000544622 OR13C9Q8NGT0 318 aa9.36□□□□□ -0.91
YBX3-216ENST00000544622 SMIM19Q96E16 107 aa9.36□□□□□ -0.91
YBX3-216ENST00000544622 PGLYRP3Q96LB9 341 aa9.36□□□□□ -0.91
YBX3-216ENST00000544622 COMMD4Q9H0A8 199 aa9.36□□□□□ -0.91
YBX3-216ENST00000544622 METTL8Q9H825 291 aaKnown RBP9.36□□□□□ -0.91
YBX3-216ENST00000544622 ZMAT3Q9HA38 289 aaKnown RBP9.36□□□□□ -0.91
YBX3-216ENST00000544622 RHOFQ9HBH0 211 aa9.36□□□□□ -0.91
YBX3-216ENST00000544622 ONECUT1Q9UBC0 465 aa9.36□□□□□ -0.91
YBX3-216ENST00000544622 IL36RNQ9UBH0 155 aa9.36□□□□□ -0.91
YBX3-216ENST00000544622 TRRAPQ9Y4A5 3859 aa9.36□□□□□ -0.91
YBX3-216ENST00000544622 TMEM82A0PJX8 343 aa9.35□□□□□ -0.91
YBX3-216ENST00000544622 SPRY1O43609 319 aaPredicted RBP9.35□□□□□ -0.91
YBX3-216ENST00000544622 PSPNO60542 156 aa9.35□□□□□ -0.91
YBX3-216ENST00000544622 HKR1P10072 659 aa9.35□□□□□ -0.91
YBX3-216ENST00000544622 BCL3P20749 454 aa9.35□□□□□ -0.91
YBX3-216ENST00000544622 LMO1P25800 156 aa9.35□□□□□ -0.91
YBX3-216ENST00000544622 UBE2E1P51965 193 aa9.35□□□□□ -0.91
YBX3-216ENST00000544622 DLX1P56177 255 aa9.35□□□□□ -0.91
YBX3-216ENST00000544622 RPS11P62280 158 aaKnown RBP eCLIP9.35□□□□□ -0.91
YBX3-216ENST00000544622 RPL31P62899 125 aaKnown RBP9.35□□□□□ -0.91
YBX3-216ENST00000544622 KISS1Q15726 138 aa9.35□□□□□ -0.91
YBX3-216ENST00000544622 RNLSQ5VYX0 342 aa9.35□□□□□ -0.91
YBX3-216ENST00000544622 SAXO1Q8IYX7 474 aa9.35□□□□□ -0.91
YBX3-216ENST00000544622 FAM58AQ8N1B3 248 aa9.35□□□□□ -0.91
YBX3-216ENST00000544622 ZSCAN4Q8NAM6 433 aaPredicted RBP9.35□□□□□ -0.91
YBX3-216ENST00000544622 OR52N4Q8NGI2 321 aa9.35□□□□□ -0.91
YBX3-216ENST00000544622 TBC1D15Q8TC07 691 aa9.35□□□□□ -0.91
YBX3-216ENST00000544622 GPR148Q8TDV2 347 aa9.35□□□□□ -0.91
YBX3-216ENST00000544622 SNX22Q96L94 193 aa9.35□□□□□ -0.91
YBX3-216ENST00000544622 DUX5Q96PT3 197 aa9.35□□□□□ -0.91
YBX3-216ENST00000544622 SPACA5Q96QH8 159 aa9.35□□□□□ -0.91
YBX3-216ENST00000544622 HMG20AQ9NP66 347 aa9.35□□□□□ -0.91
YBX3-216ENST00000544622 SIRT7Q9NRC8 400 aa9.35□□□□□ -0.91
YBX3-216ENST00000544622 RBFOX1Q9NWB1 397 aaKnown RBP9.35□□□□□ -0.91
YBX3-216ENST00000544622 OR14J1Q9UGF5 321 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms