RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585	CLN8	Q9UBY8	286 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	CAB39	Q9Y376	341 aa	Predicted RBP	4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	TRBV4-1	A0A0J9YWV2	114 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	CENPVL3	A0A0U1RRI6	287 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	ZNF816-ZNF321P	A0A0X1KG74	233 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585		A0A1W2PRG6	482 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	GMNC	A6NCL1	334 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	PRORSD1P	A6NEY8	169 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	ANKRD30BL	A7E2S9	258 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	ZNF879	B4DU55	563 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	PRAC2	D3DTV9	90 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	LRRN3	E7EW58	273 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	LGALS8	O00214	317 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	PHYH	O14832	338 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	SERPINB7	O75635	380 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	TXNDC12	O95881	172 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	PRB2	P02812	416 aa	Predicted RBP	4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	SHBG	P04278	402 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	FRMD6-AS1	P0C7T7	363 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	COX5B	P10606	129 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	ACADS	P16219	412 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	KITLG	P21583	273 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	HTR2A	P28223	471 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	IL12A	P29459	219 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	PRDX2	P32119	198 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	CDKN2A	P42771	156 aa	Known RBP	4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	SRP9	P49458	86 aa	Known RBP	4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	FADD	Q13158	208 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	HERPUD1	Q15011	391 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	SGCA	Q16586	387 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	AGK	Q53H12	422 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	TMEM41B	Q5BJD5	291 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	CEP85L	Q5SZL2	805 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	C10orf128	Q5T292	105 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	LCE4A	Q5TA78	99 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	HHAT	Q5VTY9	493 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	WDR25	Q64LD2	544 aa	Predicted RBP	4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	ZNF613	Q6PF04	617 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	RANBP3L	Q86VV4	465 aa	Predicted RBP	4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	EIF1AD	Q8N9N8	165 aa	Known RBP	4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	OR13G1	Q8NGZ3	307 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	FNDC8	Q8TC99	324 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	C10orf82	Q8WW14	230 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	ITLN1	Q8WWA0	313 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	CMBL	Q96DG6	245 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	ITCH	Q96J02	903 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	RBP7	Q96R05	134 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	OR2V2	Q96R30	315 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	SLCO1B3	Q9NPD5	702 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	ZNF229	Q9UJW7	825 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	NOTCH3	Q9UM47	2321 aa		4.92	□□□□□ -1.62
CPSF7-222	ENST00000544585	IGHV1-69D	A0A0B4J2H0	117 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	BTBD17	A6NE02	478 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	ERICH4	A6NGS2	130 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	SMIM23	A6NLE4	172 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	RNASEK-C17orf49	H0YIS7	233 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585		H0YL77	283 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	BLOC1S5-TXNDC5	H3BN57	136 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	BIRC5	O15392	142 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	NDUFA2	O43678	99 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	TPST1	O60507	370 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	SPAG7	O75391	227 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	SAP30	O75446	220 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	TRMU	O75648	421 aa	Known RBP	4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	TSHB	P01222	138 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	IGHV1-69	P01742	117 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	IGHV4-59	P01825	116 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	SERPINE1	P05121	402 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	CST2	P09228	141 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	PAICS	P22234	425 aa	Known RBP	4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	AADAC	P22760	399 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	CFHR2	P36980	270 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	GBX2	P52951	348 aa	Predicted RBP	4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	RGS8	P57771	180 aa	Predicted RBP	4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	ABCE1	P61221	599 aa	Known RBP	4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	VSNL1	P62760	191 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	KCNJ8	Q15842	424 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	ZNF74	Q16587	644 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	ZNF404	Q494X3	552 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	TMEM255A	Q5JRV8	349 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	METTL11B	Q5VVY1	283 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	SLC35E4	Q6ICL7	350 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	REEP3	Q6NUK4	255 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	ZNF841	Q6ZN19	808 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585		Q6ZR03	302 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	C9orf47	Q6ZRZ4	202 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	C16orf82	Q7Z2V1	217 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	NFE4	Q86UQ8	179 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	ZNF781	Q8N8C0	355 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	OR5L1	Q8NGL2	311 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	AKR7L	Q8NHP1	331 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	CHPT1	Q8WUD6	406 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	MED30	Q96HR3	178 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	MCHR1	Q99705	422 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	OR2H1	Q9GZK4	316 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	MEAF6	Q9HAF1	191 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	S100A14	Q9HCY8	104 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	INTS9	Q9NV88	658 aa	Known RBP	4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	AIG1	Q9NVV5	245 aa		4.91	□□□□□ -1.62
CPSF7-222	ENST00000544585	USH1C	Q9Y6N9	552 aa		4.91	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms