RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 RAD51Q06609 339 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 PRPSAP1Q14558 356 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 GABRA6Q16445 453 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 FAM83EQ2M2I3 478 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 TRMT5Q32P41 509 aaKnown RBP2.45□□□□□ -2.02
SCFD1-207ENST00000544052 LINC00303Q3SY05 128 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 GPR107Q5VW38 600 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 SPESP1Q6UW49 350 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 ASCL4Q6XD76 172 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 NDUFAF7Q7L592 441 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 SPATA24Q86W54 205 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 KRTAP11-1Q8IUC1 163 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 JAGN1Q8N5M9 183 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 ARIH2OSQ8N7S6 290 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 TMEM35BQ8NCS4 154 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 PROKR2Q8NFJ6 384 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 NDNFQ8TB73 568 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 BLOC1S5Q8TDH9 187 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 LMX1AQ8TE12 382 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 FAM172AQ8WUF8 416 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 PATE1Q8WXA2 126 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 NTAN1Q96AB6 310 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 PIGUQ9H490 435 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 MRPL40Q9NQ50 206 aaKnown RBP2.45□□□□□ -2.02
SCFD1-207ENST00000544052 OR12D3Q9UGF7 316 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 CD84Q9UIB8 345 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 FLNCQ14315 2725 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 PCM1Q15154 2024 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 MAST4O15021 2626 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 DOCK10Q96BY6 2186 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 TRIM49D1C9J1S8 452 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 AQP9O43315 295 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 KDELR3O43731 214 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 OXTP01178 125 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 EIF4EP06730 217 aaKnown RBP2.45□□□□□ -2.02
SCFD1-207ENST00000544052 GP1BAP07359 652 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 PLEKP08567 350 aaPredicted RBP2.45□□□□□ -2.02
SCFD1-207ENST00000544052 KRT16P08779 473 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 PRPS2P11908 318 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 CEACAM6P40199 344 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 MADCAM1Q13477 382 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 C16orf72Q14CZ0 275 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 PGGHGQ32M88 737 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 HES5Q5TA89 166 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 STUMQ69YW2 141 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 CYB5R2Q6BCY4 276 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 PLET1Q6UQ28 207 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 H2AFVQ71UI9 128 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 HDDC2Q7Z4H3 204 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 COMTD1Q86VU5 262 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 PHF13Q86YI8 300 aaPredicted RBP2.45□□□□□ -2.02
SCFD1-207ENST00000544052 CBLN2Q8IUK8 224 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 SELENOHQ8IZQ5 122 aaKnown RBP2.45□□□□□ -2.02
SCFD1-207ENST00000544052 C8orf31Q8N9H6 132 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 OR51L1Q8NGJ5 315 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 MITD1Q8WV92 249 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 PAIP2Q9BPZ3 127 aaKnown RBP2.45□□□□□ -2.02
SCFD1-207ENST00000544052 SNRNP25Q9BV90 132 aaKnown RBP2.45□□□□□ -2.02
SCFD1-207ENST00000544052 GAL3ST2Q9H3Q3 398 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 NTN4Q9HB63 628 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 KPTNQ9Y664 436 aa2.45□□□□□ -2.02
SCFD1-207ENST00000544052 ANKRD12Q6UB98 2062 aa2.44□□□□□ -2.02
SCFD1-207ENST00000544052 ICE1Q9Y2F5 2266 aa2.44□□□□□ -2.02
SCFD1-207ENST00000544052 USP9XQ93008 2570 aaPredicted RBP2.44□□□□□ -2.02
SCFD1-207ENST00000544052 TRBV6-6A0A0A6YYG2 114 aa2.44□□□□□ -2.02
SCFD1-207ENST00000544052 CXorf51AA0A1B0GTR3 108 aa2.44□□□□□ -2.02
SCFD1-207ENST00000544052 SIGLEC16A6NMB1 481 aa2.44□□□□□ -2.02
SCFD1-207ENST00000544052 IQCF5A8MTL0 148 aa2.44□□□□□ -2.02
SCFD1-207ENST00000544052 D6RAR5 112 aa2.44□□□□□ -2.02
SCFD1-207ENST00000544052 H0Y9J4 135 aa2.44□□□□□ -2.02
SCFD1-207ENST00000544052 RDH16O75452 317 aa2.44□□□□□ -2.02
SCFD1-207ENST00000544052 HBE1P02100 147 aa2.44□□□□□ -2.02
SCFD1-207ENST00000544052 MSR1P21757 451 aa2.44□□□□□ -2.02
SCFD1-207ENST00000544052 SDC4P31431 198 aa2.44□□□□□ -2.02
SCFD1-207ENST00000544052 CFHR2P36980 270 aa2.44□□□□□ -2.02
SCFD1-207ENST00000544052 SERPINB8P50452 374 aa2.44□□□□□ -2.02
SCFD1-207ENST00000544052 RAB7AP51149 207 aa2.44□□□□□ -2.02
SCFD1-207ENST00000544052 ZNF133P52736 654 aaPredicted RBP2.44□□□□□ -2.02
SCFD1-207ENST00000544052 CCL7P80098 99 aa2.44□□□□□ -2.02
SCFD1-207ENST00000544052 MPPED2Q15777 294 aa2.44□□□□□ -2.02
SCFD1-207ENST00000544052 RWDD4Q6NW29 188 aaKnown RBP2.44□□□□□ -2.02
SCFD1-207ENST00000544052 ERICH5Q6P6B1 374 aa2.44□□□□□ -2.02
SCFD1-207ENST00000544052 FAM122BQ7Z309 247 aa2.44□□□□□ -2.02
SCFD1-207ENST00000544052 UMODL1-AS1Q8N2C9 162 aa2.44□□□□□ -2.02
SCFD1-207ENST00000544052 OR4S2Q8NH73 311 aa2.44□□□□□ -2.02
SCFD1-207ENST00000544052 JSRP1Q96MG2 331 aaPredicted RBP2.44□□□□□ -2.02
SCFD1-207ENST00000544052 MCEEQ96PE7 176 aa2.44□□□□□ -2.02
SCFD1-207ENST00000544052 FOXC2Q99958 501 aa2.44□□□□□ -2.02
SCFD1-207ENST00000544052 CHID1Q9BWS9 393 aa2.44□□□□□ -2.02
SCFD1-207ENST00000544052 ASB8Q9H765 288 aa2.44□□□□□ -2.02
SCFD1-207ENST00000544052 CTSFQ9UBX1 484 aa2.44□□□□□ -2.02
SCFD1-207ENST00000544052 ENPP5Q9UJA9 477 aa2.44□□□□□ -2.02
SCFD1-207ENST00000544052 HIVEP3Q5T1R4 2406 aa2.44□□□□□ -2.02
SCFD1-207ENST00000544052 MDC1Q14676 2089 aaKnown RBP2.44□□□□□ -2.02
SCFD1-207ENST00000544052 UTP20O75691 2785 aaKnown RBP2.43□□□□□ -2.02
SCFD1-207ENST00000544052 NKX2-6A6NCS4 301 aa2.43□□□□□ -2.02
SCFD1-207ENST00000544052 SERPINE3A8MV23 424 aa2.43□□□□□ -2.02
SCFD1-207ENST00000544052 RAD51CO43502 376 aa2.43□□□□□ -2.02
SCFD1-207ENST00000544052 TNFSF15O95150 251 aa2.43□□□□□ -2.02
SCFD1-207ENST00000544052 RAB3DO95716 219 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms