RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 ELL3Q9HB65 397 aaPredicted RBP11.37□□□□□ -0.59
SP140-213ENST00000543928 ING4Q9UNL4 249 aa11.37□□□□□ -0.59
SP140-213ENST00000543928 AK6Q9Y3D8 172 aaKnown RBP11.37□□□□□ -0.59
SP140-213ENST00000543928 ZANQ9Y493 2812 aa11.37□□□□□ -0.59
SP140-213ENST00000543928 IGKV1D-17A0A075B6S4 117 aa11.36□□□□□ -0.59
SP140-213ENST00000543928 TRAV1-2A0A0B4J238 106 aa11.36□□□□□ -0.59
SP140-213ENST00000543928 LOC100506127A0A0U1RQW1 187 aa11.36□□□□□ -0.59
SP140-213ENST00000543928 SHISA3A0PJX4 238 aa11.36□□□□□ -0.59
SP140-213ENST00000543928 RFPL4AA6NLU0 287 aa11.36□□□□□ -0.59
SP140-213ENST00000543928 RFPL4AL1F8VTS6 287 aa11.36□□□□□ -0.59
SP140-213ENST00000543928 TMPRSS2O15393 492 aa11.36□□□□□ -0.59
SP140-213ENST00000543928 IGHV4-31P0DP07 118 aa11.36□□□□□ -0.59
SP140-213ENST00000543928 PSG2P11465 335 aa11.36□□□□□ -0.59
SP140-213ENST00000543928 AMY2BP19961 511 aa11.36□□□□□ -0.59
SP140-213ENST00000543928 MYL9P24844 172 aa11.36□□□□□ -0.59
SP140-213ENST00000543928 GZMKP49863 264 aa11.36□□□□□ -0.59
SP140-213ENST00000543928 RSU1Q15404 277 aa11.36□□□□□ -0.59
SP140-213ENST00000543928 ATPAF1Q5TC12 328 aaPredicted RBP11.36□□□□□ -0.59
SP140-213ENST00000543928 GLT8D1Q68CQ7 371 aa11.36□□□□□ -0.59
SP140-213ENST00000543928 ASCL4Q6XD76 172 aa11.36□□□□□ -0.59
SP140-213ENST00000543928 FAM58AQ8N1B3 248 aa11.36□□□□□ -0.59
SP140-213ENST00000543928 OR8B3Q8NGG8 313 aa11.36□□□□□ -0.59
SP140-213ENST00000543928 OR4D6Q8NGJ1 314 aa11.36□□□□□ -0.59
SP140-213ENST00000543928 OR13F1Q8NGS4 319 aa11.36□□□□□ -0.59
SP140-213ENST00000543928 OR10K1Q8NGX5 313 aa11.36□□□□□ -0.59
SP140-213ENST00000543928 FOXRED1Q96CU9 486 aaPredicted RBP11.36□□□□□ -0.59
SP140-213ENST00000543928 C1orf159Q96HA4 380 aa11.36□□□□□ -0.59
SP140-213ENST00000543928 OR8B2Q96RD0 313 aa11.36□□□□□ -0.59
SP140-213ENST00000543928 S100A13Q99584 98 aa11.36□□□□□ -0.59
SP140-213ENST00000543928 GFI1Q99684 422 aa11.36□□□□□ -0.59
SP140-213ENST00000543928 UQCC2Q9BRT2 126 aa11.36□□□□□ -0.59
SP140-213ENST00000543928 IL36RNQ9UBH0 155 aa11.36□□□□□ -0.59
SP140-213ENST00000543928 KAAG1Q9UBP8 84 aa11.36□□□□□ -0.59
SP140-213ENST00000543928 CTSZQ9UBR2 303 aa11.36□□□□□ -0.59
SP140-213ENST00000543928 OR14J1Q9UGF5 321 aa11.36□□□□□ -0.59
SP140-213ENST00000543928 ZNF222Q9UK12 451 aa11.36□□□□□ -0.59
SP140-213ENST00000543928 GSTK1Q9Y2Q3 226 aa11.36□□□□□ -0.59
SP140-213ENST00000543928 MRPS28Q9Y2Q9 187 aaKnown RBP11.36□□□□□ -0.59
SP140-213ENST00000543928 MALRD1Q5VYJ5 2156 aa11.35□□□□□ -0.59
SP140-213ENST00000543928 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.35□□□□□ -0.59
SP140-213ENST00000543928 TLN2Q9Y4G6 2542 aa11.35□□□□□ -0.59
SP140-213ENST00000543928 A0A1B0GW55 424 aa11.35□□□□□ -0.59
SP140-213ENST00000543928 NKX6-3A6NJ46 265 aa11.35□□□□□ -0.59
SP140-213ENST00000543928 KNG1P01042 644 aa11.35□□□□□ -0.59
SP140-213ENST00000543928 TFAP2AP05549 437 aa11.35□□□□□ -0.59
SP140-213ENST00000543928 DUX4L2P0CJ85 424 aa11.35□□□□□ -0.59
SP140-213ENST00000543928 DUX4L3P0CJ86 424 aa11.35□□□□□ -0.59
SP140-213ENST00000543928 DUX4L4P0CJ87 422 aa11.35□□□□□ -0.59
SP140-213ENST00000543928 DUX4L5P0CJ88 424 aa11.35□□□□□ -0.59
SP140-213ENST00000543928 DUX4L6P0CJ89 424 aa11.35□□□□□ -0.59
SP140-213ENST00000543928 DUX4L7P0CJ90 424 aa11.35□□□□□ -0.59
SP140-213ENST00000543928 PRKACAP17612 351 aa11.35□□□□□ -0.59
SP140-213ENST00000543928 CPT2P23786 658 aa11.35□□□□□ -0.59
SP140-213ENST00000543928 PITPNBP48739 271 aa11.35□□□□□ -0.59
SP140-213ENST00000543928 CEBPDP49716 269 aaPredicted RBP11.35□□□□□ -0.59
SP140-213ENST00000543928 SNU13P55769 128 aaKnown RBP11.35□□□□□ -0.59
SP140-213ENST00000543928 TIMM50Q3ZCQ8 353 aa11.35□□□□□ -0.59
SP140-213ENST00000543928 ESCO2Q56NI9 601 aa11.35□□□□□ -0.59
SP140-213ENST00000543928 CYB5R2Q6BCY4 276 aa11.35□□□□□ -0.59
SP140-213ENST00000543928 AWAT2Q6E213 333 aa11.35□□□□□ -0.59
SP140-213ENST00000543928 DUX4L9Q6RFH8 374 aaPredicted RBP11.35□□□□□ -0.59
SP140-213ENST00000543928 FIP1L1Q6UN15 594 aaKnown RBP11.35□□□□□ -0.59
SP140-213ENST00000543928 GLIPR1L1Q6UWM5 242 aa11.35□□□□□ -0.59
SP140-213ENST00000543928 ZNF788Q6ZQV5 615 aa11.35□□□□□ -0.59
SP140-213ENST00000543928 SLC36A1Q7Z2H8 476 aa11.35□□□□□ -0.59
SP140-213ENST00000543928 FAM216BQ8N7L0 139 aa11.35□□□□□ -0.59
SP140-213ENST00000543928 LINC01356Q8N9X3 169 aa11.35□□□□□ -0.59
SP140-213ENST00000543928 MSI2Q96DH6 328 aaKnown RBP11.35□□□□□ -0.59
SP140-213ENST00000543928 KCTD7Q96MP8 289 aa11.35□□□□□ -0.59
SP140-213ENST00000543928 GAFA1Q96PS6 74 aa11.35□□□□□ -0.59
SP140-213ENST00000543928 SMR3AQ99954 134 aa11.35□□□□□ -0.59
SP140-213ENST00000543928 CENPOQ9BU64 300 aa11.35□□□□□ -0.59
SP140-213ENST00000543928 DNTTIP1Q9H147 329 aa11.35□□□□□ -0.59
SP140-213ENST00000543928 METTL9Q9H1A3 318 aa11.35□□□□□ -0.59
SP140-213ENST00000543928 RHOFQ9HBH0 211 aa11.35□□□□□ -0.59
SP140-213ENST00000543928 LPAR2Q9HBW0 351 aa11.35□□□□□ -0.59
SP140-213ENST00000543928 HMG20AQ9NP66 347 aa11.35□□□□□ -0.59
SP140-213ENST00000543928 DUX4Q9UBX2 424 aa11.35□□□□□ -0.59
SP140-213ENST00000543928 B4DSR2 109 aa11.34□□□□□ -0.59
SP140-213ENST00000543928 PDCD5O14737 125 aa11.34□□□□□ -0.59
SP140-213ENST00000543928 AIREO43918 545 aa11.34□□□□□ -0.59
SP140-213ENST00000543928 HTR3BO95264 441 aa11.34□□□□□ -0.59
SP140-213ENST00000543928 CD37P11049 281 aa11.34□□□□□ -0.59
SP140-213ENST00000543928 SELLP14151 372 aa11.34□□□□□ -0.59
SP140-213ENST00000543928 ZNF16P17020 682 aaPredicted RBP11.34□□□□□ -0.59
SP140-213ENST00000543928 SERPINA2P20848 420 aa11.34□□□□□ -0.59
SP140-213ENST00000543928 DUSP1P28562 367 aa11.34□□□□□ -0.59
SP140-213ENST00000543928 PRDX2P32119 198 aa11.34□□□□□ -0.59
SP140-213ENST00000543928 ALDH3B2P48448 385 aa11.34□□□□□ -0.59
SP140-213ENST00000543928 MTNR1BP49286 362 aa11.34□□□□□ -0.59
SP140-213ENST00000543928 GNB2P62879 340 aa11.34□□□□□ -0.59
SP140-213ENST00000543928 IL13RA1P78552 427 aa11.34□□□□□ -0.59
SP140-213ENST00000543928 KRTAP1-1Q07627 177 aa11.34□□□□□ -0.59
SP140-213ENST00000543928 IKZF1Q13422 519 aa11.34□□□□□ -0.59
SP140-213ENST00000543928 SLC22A6Q4U2R8 563 aa11.34□□□□□ -0.59
SP140-213ENST00000543928 C1orf100Q5SVJ3 147 aa11.34□□□□□ -0.59
SP140-213ENST00000543928 ELP2Q6IA86 826 aa11.34□□□□□ -0.59
SP140-213ENST00000543928 ZNF841Q6ZN19 808 aa11.34□□□□□ -0.59
SP140-213ENST00000543928 GDPGP1Q6ZNW5 385 aa11.34□□□□□ -0.59
SP140-213ENST00000543928 CD177Q8N6Q3 437 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms