RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 EIF1BO60739 113 aaKnown RBP9.01□□□□□ -0.97
CDC42SE1-207ENST00000540998 CST7O76096 145 aa9.01□□□□□ -0.97
CDC42SE1-207ENST00000540998 MDKP21741 143 aaPredicted RBP9.01□□□□□ -0.97
CDC42SE1-207ENST00000540998 EIF1P41567 113 aaKnown RBP9.01□□□□□ -0.97
CDC42SE1-207ENST00000540998 RPS10P46783 165 aaKnown RBP9.01□□□□□ -0.97
CDC42SE1-207ENST00000540998 RPS23P62266 143 aaKnown RBP9.01□□□□□ -0.97
CDC42SE1-207ENST00000540998 HNF4GQ14541 408 aa9.01□□□□□ -0.97
CDC42SE1-207ENST00000540998 NKAIN1Q4KMZ8 207 aa9.01□□□□□ -0.97
CDC42SE1-207ENST00000540998 GFI1BQ5VTD9 330 aa9.01□□□□□ -0.97
CDC42SE1-207ENST00000540998 SLC2A9Q9NRM0 540 aa9.01□□□□□ -0.97
CDC42SE1-207ENST00000540998 KPTNQ9Y664 436 aa9.01□□□□□ -0.97
CDC42SE1-207ENST00000540998 IFITM10A6NMD0 228 aa9.01□□□□□ -0.97
CDC42SE1-207ENST00000540998 NUDT19A8MXV4 375 aa9.01□□□□□ -0.97
CDC42SE1-207ENST00000540998 M0R135 149 aa9.01□□□□□ -0.97
CDC42SE1-207ENST00000540998 DHRS3O75911 302 aa9.01□□□□□ -0.97
CDC42SE1-207ENST00000540998 MT-ND4LP03901 98 aa9.01□□□□□ -0.97
CDC42SE1-207ENST00000540998 DANCRP0C864 163 aa9.01□□□□□ -0.97
CDC42SE1-207ENST00000540998 ZNF728P0DKX0 622 aa9.01□□□□□ -0.97
CDC42SE1-207ENST00000540998 TMEM187Q14656 261 aa9.01□□□□□ -0.97
CDC42SE1-207ENST00000540998 IZUMO4Q1ZYL8 232 aa9.01□□□□□ -0.97
CDC42SE1-207ENST00000540998 FBXW12Q6X9E4 464 aa9.01□□□□□ -0.97
CDC42SE1-207ENST00000540998 C17orf82Q86X59 251 aaPredicted RBP9.01□□□□□ -0.97
CDC42SE1-207ENST00000540998 FBXL14Q8N1E6 418 aa9.01□□□□□ -0.97
CDC42SE1-207ENST00000540998 OR2M3Q8NG83 312 aa9.01□□□□□ -0.97
CDC42SE1-207ENST00000540998 RHBDD1Q8TEB9 315 aa9.01□□□□□ -0.97
CDC42SE1-207ENST00000540998 MVB12AQ96EY5 273 aa9.01□□□□□ -0.97
CDC42SE1-207ENST00000540998 ZNF799Q96GE5 643 aa9.01□□□□□ -0.97
CDC42SE1-207ENST00000540998 SCGB3A2Q96PL1 93 aa9.01□□□□□ -0.97
CDC42SE1-207ENST00000540998 EGLN1Q9GZT9 426 aa9.01□□□□□ -0.97
CDC42SE1-207ENST00000540998 LMAN1LQ9HAT1 526 aa9.01□□□□□ -0.97
CDC42SE1-207ENST00000540998 FAM212BQ9NTI7 297 aaPredicted RBP9.01□□□□□ -0.97
CDC42SE1-207ENST00000540998 TINAGQ9UJW2 476 aa9.01□□□□□ -0.97
CDC42SE1-207ENST00000540998 CFAP47Q6ZTR5 3102 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 TAAR5O14804 337 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 DUX1O43812 170 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 PIAS2O75928 621 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 IGHV3-9P01782 118 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 PRF1P14222 555 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 EPHA1P21709 976 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 CD27P26842 260 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 NTF4P34130 210 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 RSU1Q15404 277 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 ZNF774Q6NX45 483 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 SLC35G3Q8N808 338 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 SLC22A8Q8TCC7 542 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 OIT3Q8WWZ8 545 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 NAT6Q93015 286 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 MR1Q95460 341 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 Q96M66 194 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 ZNF251Q9BRH9 671 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 FAM86C1Q9NVL1 165 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 MYOTQ9UBF9 498 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 TUBD1Q9UJT1 453 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 DNAJC13O75165 2243 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 NKX2-6A6NCS4 301 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 H3BP45 60 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 CCL1P22362 96 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 GLP1RP43220 463 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 SLC35A1P78382 337 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 IGFBP7Q16270 282 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 OPN5Q6U736 354 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 C5orf46Q6UWT4 87 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 PLXDC1Q8IUK5 500 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 LINC00469Q8N7U9 141 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 UBAC2Q8NBM4 344 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 OR10AD1Q8NGE0 317 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 OR6X1Q8NH79 312 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 TMEM171Q8WVE6 324 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 HAS2Q92819 552 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 ALKBH3Q96Q83 286 aaPredicted RBP9□□□□□ -0.97
CDC42SE1-207ENST00000540998 HS3ST6Q96QI5 342 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 NUDT16L1Q9BRJ7 211 aaKnown RBP9□□□□□ -0.97
CDC42SE1-207ENST00000540998 CHST5Q9GZS9 411 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 NAA60Q9H7X0 242 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 MOB1AQ9H8S9 216 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 KCNJ16Q9NPI9 418 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 ZMAT5Q9UDW3 170 aaKnown RBP9□□□□□ -0.97
CDC42SE1-207ENST00000540998 CHD3Q12873 2000 aaKnown RBP9□□□□□ -0.97
CDC42SE1-207ENST00000540998 BOD1L1Q8NFC6 3051 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 SERPINE3A8MV23 424 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 IGHV2-5P01817 119 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 CTSDP07339 412 aaPredicted RBP9□□□□□ -0.97
CDC42SE1-207ENST00000540998 SMIM6P0DI80 62 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 FOLR2P14207 255 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 HNRNPKP61978 463 aaKnown RBP eCLIP9□□□□□ -0.973e-7■■□□□ 12.8
CDC42SE1-207ENST00000540998 CXorf66Q5JRM2 361 aaPredicted RBP9□□□□□ -0.97
CDC42SE1-207ENST00000540998 RAET1LQ5VY80 246 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 SLC23A3Q6PIS1 610 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 FAM180AQ6UWF9 173 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 ZNF561Q8N587 486 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 MRGPRX4Q96LA9 322 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 OXGR1Q96P68 337 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 RASL10BQ96S79 203 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 ZNF700Q9H0M5 742 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 SEBOXQ9HB31 216 aaPredicted RBP9□□□□□ -0.97
CDC42SE1-207ENST00000540998 LIPGQ9Y5X9 500 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 R4GN57 208 aa9□□□□□ -0.97
CDC42SE1-207ENST00000540998 IGSF23A1L1A6 192 aa8.99□□□□□ -0.97
CDC42SE1-207ENST00000540998 SSSCA1O60232 199 aa8.99□□□□□ -0.97
CDC42SE1-207ENST00000540998 OR2C1O95371 312 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms