RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 PEX14O75381 377 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 CCNKO75909 580 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 TCRBP04435 133 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 H2AFB2P0C5Z0 115 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 FAM90A15PP0C7V4 464 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 FAM90A13PP0C7W8 464 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 FAM90A14PP0C7W9 464 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 FAM90A24PP0C7X0 464 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 TMEM225BP0DP42 221 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 CBR1P16152 277 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 OPRM1P35372 400 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 ECI1P42126 302 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 GNG2P59768 71 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 DGCR2P98153 550 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 RSU1Q15404 277 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 RBMS2Q15434 407 aaKnown RBP7.16□□□□□ -1.26
CHD4-208ENST00000540960 GUSBP1Q15486 140 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 RSPO1Q2MKA7 263 aaPredicted RBP7.16□□□□□ -1.26
CHD4-208ENST00000540960 PCGF3Q3KNV8 242 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 PLA1AQ53H76 456 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 METTL11BQ5VVY1 283 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 ASCL4Q6XD76 172 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 ZNF573Q86YE8 665 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 MKXQ8IYA7 352 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 OR5AS1Q8N127 324 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 FAM89BQ8N5H3 189 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 CNEP1R1Q8N9A8 125 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 SPERTQ8NA61 448 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 CHST4Q8NCG5 386 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 SLC30A7Q8NEW0 376 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 OR5A2Q8NGI9 324 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 OR4D6Q8NGJ1 314 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 AQP3Q92482 292 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 ORAI1Q96D31 301 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 RAB3CQ96E17 227 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 POM121L2Q96KW2 1035 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 WFIKKN1Q96NZ8 548 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 PRRT1Q99946 306 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 C12orf49Q9H741 205 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 CHODLQ9H9P2 273 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 IFT46Q9NQC8 304 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 B3GNT2Q9NY97 397 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 NKIRAS2Q9NYR9 191 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 PTTG3PQ9NZH4 202 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 NLKQ9UBE8 527 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 ZNF221Q9UK13 617 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 ING4Q9UNL4 249 aa7.16□□□□□ -1.26
CHD4-208ENST00000540960 CMYA5Q8N3K9 4069 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 IGHV4-30-2A0A087WSY4 118 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 A0A096LPE4 126 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.15□□□□□ -1.26
CHD4-208ENST00000540960 A0A1W2PPZ6 126 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 UBE2QL1A1L167 161 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 TMEM89A2RUT3 159 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 SNRPGP15A8MWD9 76 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 H3BSH0 61 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 CDC14BO60729 498 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 CRTAPO75718 401 aaPredicted RBP7.15□□□□□ -1.26
CHD4-208ENST00000540960 IGHV3-9P01782 118 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 HLA-HP01893 362 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 IFNA6P05013 189 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 IL5P05113 134 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 DBHP09172 617 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 FAHP16930 419 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 COX5AP20674 150 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 MPZP25189 248 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 TAS2R46P59540 309 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 RPS27AP62979 156 aaKnown RBP7.15□□□□□ -1.26
CHD4-208ENST00000540960 QRFPP83859 136 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 FAM3AP98173 230 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 CDK10Q15131 360 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 TATDN3Q17R31 274 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 SNAI3Q3KNW1 292 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 CEACAM21Q3KPI0 293 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 CDNFQ49AH0 187 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 PLCXD3Q63HM9 321 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 ASPHD2Q6ICH7 369 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 STEAP1BQ6NZ63 245 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 ZNF782Q6ZMW2 699 aaPredicted RBP7.15□□□□□ -1.26
CHD4-208ENST00000540960 Q6ZTK2 550 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 LINC00596Q86U02 117 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 NAA40Q86UY6 237 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 ZDHHC23Q8IYP9 409 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 IZUMO1Q8IYV9 350 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 DRAXINQ8NBI3 349 aaPredicted RBP7.15□□□□□ -1.26
CHD4-208ENST00000540960 OR51T1Q8NGJ9 327 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 LYZL4Q96KX0 146 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 GAL3ST1Q99999 423 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 MICU1Q9BPX6 476 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 NEURL2Q9BR09 285 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 TM2D1Q9BX74 207 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 BCL2L14Q9BZR8 327 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 CHST6Q9GZX3 395 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 MED28Q9H204 178 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 OR10A4Q9H209 315 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 ELL3Q9HB65 397 aaPredicted RBP7.15□□□□□ -1.26
CHD4-208ENST00000540960 SPACA1Q9HBV2 294 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 HRASLSQ9HDD0 168 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 ZNF224Q9NZL3 707 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 MRPL15Q9P015 296 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms