RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 NDNFQ8TB73 568 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 GATAD1Q8WUU5 269 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.6□□□□□ -1.836e-13■■□□□ 14.1
SNHG1-214ENST00000540865 OR5P3Q8WZ94 311 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 LZICQ8WZA0 190 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 RPL3LQ92901 407 aaKnown RBP3.6□□□□□ -1.83
SNHG1-214ENST00000540865 STMN2Q93045 179 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 PRRC1Q96M27 445 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 TSSK2Q96PF2 358 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 DUX3Q96PT4 197 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 SLC25A33Q9BSK2 321 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 PAPOLGQ9BWT3 736 aaKnown RBP3.6□□□□□ -1.83
SNHG1-214ENST00000540865 C1orf21Q9H246 121 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 KAT8Q9H7Z6 458 aaKnown RBP3.6□□□□□ -1.83
SNHG1-214ENST00000540865 YY1AP1Q9H869 796 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 RASL12Q9NYN1 266 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 RHBDD3Q9Y3P4 386 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 MPC1Q9Y5U8 109 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 IER3IP1Q9Y5U9 82 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 A0A087WUU8 490 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 hCG_38984A0A1B0GV85 526 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 SH2D7A6NKC9 451 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-214ENST00000540865 RFPL4AA6NLU0 287 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 ZAR1LA6NP61 321 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 RFPL4AL1F8VTS6 287 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 SLC1A7O00341 560 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 SLC22A2O15244 555 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 RENP00797 406 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 CST4P01036 141 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 IFNA6P05013 189 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 ANXA2P07355 339 aaKnown RBP3.59□□□□□ -1.83
SNHG1-214ENST00000540865 ZNF728P0DKX0 622 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 TROVE2P10155 538 aaKnown RBP eCLIP3.59□□□□□ -1.83
SNHG1-214ENST00000540865 SLC2A1P11166 492 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 ZNF823P16415 610 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 CD24P25063 80 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 HTR1DP28221 377 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 PRDX2P32119 198 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 DCTDP32321 178 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 GPR4P46093 362 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 OR1E2P47887 323 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 CDX1P47902 265 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-214ENST00000540865 GZMMP51124 257 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 PRKXP51817 358 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 MTPNP58546 118 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 FHL3Q13643 280 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 PMS2P11Q13670 270 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 TIGD6Q17RP2 521 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 KRTAP15-1Q3LI76 137 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 EPGNQ6UW88 154 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 KCTD8Q6ZWB6 473 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 ZNF429Q86V71 674 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 ZDHHC21Q8IVQ6 265 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 IZUMO1Q8IYV9 350 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 OFCC1Q8IZS5 231 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 OR4M1Q8NGD0 313 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 ZNF671Q8TAW3 534 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 BCAS4Q8TDM0 211 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 SGK3Q96BR1 496 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 RNFT2Q96EX2 444 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 REEP6Q96HR9 211 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 RNF170Q96K19 258 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 CDRT15Q96T59 188 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 CGREF1Q99674 301 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 COPS4Q9BT78 406 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 TMEM109Q9BVC6 243 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 ALG8Q9BVK2 526 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 FNDC11Q9BVV2 318 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 PPP1R3EQ9H7J1 279 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 DCLRE1BQ9H816 532 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 SP140LQ9H930 580 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 PAPOLBQ9NRJ5 636 aaKnown RBP3.59□□□□□ -1.83
SNHG1-214ENST00000540865 CCDC167Q9P0B6 97 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 DPM3Q9P2X0 92 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 TAGLN3Q9UI15 199 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 HHLA2Q9UM44 414 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 SIGLEC7Q9Y286 467 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 TMEM5Q9Y2B1 443 aa3.59□□□□□ -1.83
SNHG1-214ENST00000540865 HSPG2P98160 4391 aa3.59□□□□□ -1.84
SNHG1-214ENST00000540865 SORL1Q92673 2214 aa3.58□□□□□ -1.84
SNHG1-214ENST00000540865 IGHV2-26A0A0B4J1V2 119 aa3.58□□□□□ -1.84
SNHG1-214ENST00000540865 OR6C68A6NDL8 312 aa3.58□□□□□ -1.84
SNHG1-214ENST00000540865 ZNF850A8MQ14 1090 aa3.58□□□□□ -1.84
SNHG1-214ENST00000540865 SERPINE3A8MV23 424 aa3.58□□□□□ -1.84
SNHG1-214ENST00000540865 A8MZ25 164 aa3.58□□□□□ -1.84
SNHG1-214ENST00000540865 PRR23D1E9PI22 279 aaPredicted RBP3.58□□□□□ -1.84
SNHG1-214ENST00000540865 CCRL2O00421 344 aa3.58□□□□□ -1.84
SNHG1-214ENST00000540865 ARPC3O15145 178 aa3.58□□□□□ -1.84
SNHG1-214ENST00000540865 HLA-DQA2P01906 255 aa3.58□□□□□ -1.84
SNHG1-214ENST00000540865 APOC1P02654 83 aa3.58□□□□□ -1.84
SNHG1-214ENST00000540865 TK1P04183 234 aa3.58□□□□□ -1.84
SNHG1-214ENST00000540865 PRR23D2P0DMB1 279 aaPredicted RBP3.58□□□□□ -1.84
SNHG1-214ENST00000540865 PIPP12273 146 aaPredicted RBP3.58□□□□□ -1.84
SNHG1-214ENST00000540865 GP9P14770 177 aa3.58□□□□□ -1.84
SNHG1-214ENST00000540865 ACTA2P62736 377 aa3.58□□□□□ -1.84
SNHG1-214ENST00000540865 ACTG2P63267 376 aa3.58□□□□□ -1.84
SNHG1-214ENST00000540865 ACTC1P68032 377 aa3.58□□□□□ -1.84
SNHG1-214ENST00000540865 ACTA1P68133 377 aa3.58□□□□□ -1.84
SNHG1-214ENST00000540865 MEF2CQ06413 473 aaPredicted RBP3.58□□□□□ -1.84
SNHG1-214ENST00000540865 PRDX4Q13162 271 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms