RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 ACKR3P25106 362 aa10.69□□□□□ -0.7
NPC1-202ENST00000540608 CHATP28329 748 aa10.69□□□□□ -0.7
NPC1-202ENST00000540608 PMELP40967 661 aa10.69□□□□□ -0.7
NPC1-202ENST00000540608 CAMLGP49069 296 aa10.69□□□□□ -0.7
NPC1-202ENST00000540608 ZNF616Q08AN1 781 aa10.69□□□□□ -0.7
NPC1-202ENST00000540608 EIF2S3LQ2VIR3 472 aaKnown RBP10.69□□□□□ -0.7
NPC1-202ENST00000540608 FAM27BQ5VT28 67 aa10.69□□□□□ -0.7
NPC1-202ENST00000540608 TAAR9Q96RI9 348 aa10.69□□□□□ -0.7
NPC1-202ENST00000540608 C19orf12Q9NSK7 152 aa10.69□□□□□ -0.7
NPC1-202ENST00000540608 FOXD3Q9UJU5 478 aaPredicted RBP10.69□□□□□ -0.7
NPC1-202ENST00000540608 NXT1Q9UKK6 140 aaKnown RBP10.69□□□□□ -0.7
NPC1-202ENST00000540608 IGHV3-15A0A0B4J1V0 119 aa10.69□□□□□ -0.7
NPC1-202ENST00000540608 LY6G6EA0A0G2JKS1 128 aa10.69□□□□□ -0.7
NPC1-202ENST00000540608 IGHV5-10-1A0A0J9YXX1 117 aa10.69□□□□□ -0.7
NPC1-202ENST00000540608 FAM230AA0A1W2PPH8 454 aa10.69□□□□□ -0.7
NPC1-202ENST00000540608 SPRY1O43609 319 aaPredicted RBP10.69□□□□□ -0.7
NPC1-202ENST00000540608 DIRAS3O95661 229 aa10.69□□□□□ -0.7
NPC1-202ENST00000540608 S100A8P05109 93 aa10.69□□□□□ -0.7
NPC1-202ENST00000540608 LMO1P25800 156 aa10.69□□□□□ -0.7
NPC1-202ENST00000540608 DUSP1P28562 367 aa10.69□□□□□ -0.7
NPC1-202ENST00000540608 IL13RA2Q14627 380 aa10.69□□□□□ -0.7
NPC1-202ENST00000540608 TMEM156Q8N614 296 aa10.69□□□□□ -0.7
NPC1-202ENST00000540608 SLC39A7Q92504 469 aa10.69□□□□□ -0.7
NPC1-202ENST00000540608 UCN2Q96RP3 112 aa10.69□□□□□ -0.7
NPC1-202ENST00000540608 EIF5A2Q9GZV4 153 aaKnown RBP10.69□□□□□ -0.7
NPC1-202ENST00000540608 SPACA1Q9HBV2 294 aa10.69□□□□□ -0.7
NPC1-202ENST00000540608 FSCN3Q9NQT6 498 aa10.69□□□□□ -0.7
NPC1-202ENST00000540608 ZNF581Q9P0T4 197 aa10.69□□□□□ -0.7
NPC1-202ENST00000540608 STRAPQ9Y3F4 350 aaKnown RBP10.69□□□□□ -0.7
NPC1-202ENST00000540608 U3KQA8 63 aa10.69□□□□□ -0.7
NPC1-202ENST00000540608 IGKV1-27A0A075B6S5 117 aa10.68□□□□□ -0.7
NPC1-202ENST00000540608 K7ESF4 209 aa10.68□□□□□ -0.7
NPC1-202ENST00000540608 TERTO14746 1132 aaKnown RBP10.68□□□□□ -0.7
NPC1-202ENST00000540608 S100A6P06703 90 aa10.68□□□□□ -0.7
NPC1-202ENST00000540608 CRYGSP22914 178 aa10.68□□□□□ -0.7
NPC1-202ENST00000540608 CNN3Q15417 329 aaKnown RBP10.68□□□□□ -0.7
NPC1-202ENST00000540608 MAML2Q8IZL2 1156 aaPredicted RBP10.68□□□□□ -0.7
NPC1-202ENST00000540608 ZIC4Q8N9L1 334 aa10.68□□□□□ -0.7
NPC1-202ENST00000540608 HPSE2Q8WWQ2 592 aa10.68□□□□□ -0.7
NPC1-202ENST00000540608 MSI2Q96DH6 328 aaKnown RBP10.68□□□□□ -0.7
NPC1-202ENST00000540608 IP6K3Q96PC2 410 aa10.68□□□□□ -0.7
NPC1-202ENST00000540608 ULBP2Q9BZM5 246 aa10.68□□□□□ -0.7
NPC1-202ENST00000540608 CACNA1EQ15878 2313 aa10.68□□□□□ -0.7
NPC1-202ENST00000540608 GDF9O60383 454 aa10.68□□□□□ -0.7
NPC1-202ENST00000540608 ZNF205O95201 554 aa10.68□□□□□ -0.7
NPC1-202ENST00000540608 SMIM6P0DI80 62 aa10.68□□□□□ -0.7
NPC1-202ENST00000540608 PNLIPP16233 465 aa10.68□□□□□ -0.7
NPC1-202ENST00000540608 FXYD4P59646 89 aa10.68□□□□□ -0.7
NPC1-202ENST00000540608 MRPS34P82930 218 aaKnown RBP10.68□□□□□ -0.7
NPC1-202ENST00000540608 C20orf196Q8IYI0 205 aa10.68□□□□□ -0.7
NPC1-202ENST00000540608 LGI3Q8N145 548 aa10.68□□□□□ -0.7
NPC1-202ENST00000540608 OR52M1Q8NGK5 317 aa10.68□□□□□ -0.7
NPC1-202ENST00000540608 MARS2Q96GW9 593 aaKnown RBP10.68□□□□□ -0.7
NPC1-202ENST00000540608 REEP6Q96HR9 211 aa10.68□□□□□ -0.7
NPC1-202ENST00000540608 SYT3Q9BQG1 590 aa10.68□□□□□ -0.7
NPC1-202ENST00000540608 SLC2A9Q9NRM0 540 aa10.68□□□□□ -0.7
NPC1-202ENST00000540608 ZDHHC8Q9ULC8 765 aa10.68□□□□□ -0.7
NPC1-202ENST00000540608 DMDP11532 3685 aa10.68□□□□□ -0.7
NPC1-202ENST00000540608 M0R036 132 aa10.67□□□□□ -0.7
NPC1-202ENST00000540608 ST8SIA3O43173 380 aa10.67□□□□□ -0.7
NPC1-202ENST00000540608 XRCC2O43543 280 aa10.67□□□□□ -0.7
NPC1-202ENST00000540608 GLP1RP43220 463 aa10.67□□□□□ -0.7
NPC1-202ENST00000540608 FHITP49789 147 aa10.67□□□□□ -0.7
NPC1-202ENST00000540608 RBP2P50120 134 aa10.67□□□□□ -0.7
NPC1-202ENST00000540608 UCP3P55916 312 aa10.67□□□□□ -0.7
NPC1-202ENST00000540608 TSC22D1Q15714 1073 aa10.67□□□□□ -0.7
NPC1-202ENST00000540608 PHLDA2Q53GA4 152 aa10.67□□□□□ -0.7
NPC1-202ENST00000540608 TSPO2Q5TGU0 170 aa10.67□□□□□ -0.7
NPC1-202ENST00000540608 OR2AE1Q8NHA4 323 aa10.67□□□□□ -0.7
NPC1-202ENST00000540608 ZNF837Q96EG3 531 aaPredicted RBP10.67□□□□□ -0.7
NPC1-202ENST00000540608 CCDC74BQ96LY2 380 aa10.67□□□□□ -0.7
NPC1-202ENST00000540608 GNRHR2Q96P88 292 aa10.67□□□□□ -0.7
NPC1-202ENST00000540608 ZIC3O60481 467 aa10.67□□□□□ -0.7
NPC1-202ENST00000540608 PRH1P02810 166 aa10.67□□□□□ -0.7
NPC1-202ENST00000540608 CYC1P08574 325 aa10.67□□□□□ -0.7
NPC1-202ENST00000540608 DSCR4P56555 118 aaPredicted RBP10.67□□□□□ -0.7
NPC1-202ENST00000540608 RAB35Q15286 201 aa10.67□□□□□ -0.7
NPC1-202ENST00000540608 MRPL14Q6P1L8 145 aaKnown RBP10.67□□□□□ -0.7
NPC1-202ENST00000540608 FBXW12Q6X9E4 464 aa10.67□□□□□ -0.7
NPC1-202ENST00000540608 LHFPL2Q6ZUX7 228 aa10.67□□□□□ -0.7
NPC1-202ENST00000540608 OR10AD1Q8NGE0 317 aa10.67□□□□□ -0.7
NPC1-202ENST00000540608 NANPQ8TBE9 248 aa10.67□□□□□ -0.7
NPC1-202ENST00000540608 SH3BGRL3Q9H299 93 aa10.67□□□□□ -0.7
NPC1-202ENST00000540608 CCDC187A0A096LP49 1063 aa10.66□□□□□ -0.7
NPC1-202ENST00000540608 NSG1A0A0A6YYJ2 146 aa10.66□□□□□ -0.7
NPC1-202ENST00000540608 A0A1B0GW64 132 aa10.66□□□□□ -0.7
NPC1-202ENST00000540608 GEMIN2O14893 280 aaKnown RBP10.66□□□□□ -0.7
NPC1-202ENST00000540608 SGCEO43556 437 aa10.66□□□□□ -0.7
NPC1-202ENST00000540608 SYNGR3O43761 229 aa10.66□□□□□ -0.7
NPC1-202ENST00000540608 S100A9P06702 114 aaKnown RBP10.66□□□□□ -0.7
NPC1-202ENST00000540608 LIFP15018 202 aa10.66□□□□□ -0.7
NPC1-202ENST00000540608 EPHA8P29322 1005 aaPredicted RBP10.66□□□□□ -0.7
NPC1-202ENST00000540608 NHLH2Q02577 135 aa10.66□□□□□ -0.7
NPC1-202ENST00000540608 PCOLCEQ15113 449 aa10.66□□□□□ -0.7
NPC1-202ENST00000540608 RAET1LQ5VY80 246 aa10.66□□□□□ -0.7
NPC1-202ENST00000540608 SLC22A25Q6T423 547 aa10.66□□□□□ -0.7
NPC1-202ENST00000540608 OR5L1Q8NGL2 311 aa10.66□□□□□ -0.7
NPC1-202ENST00000540608 MOB3AQ96BX8 217 aa10.66□□□□□ -0.7
NPC1-202ENST00000540608 BORCS8Q96FH0 119 aa10.66□□□□□ -0.7
NPC1-202ENST00000540608 PBDC1Q9BVG4 233 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms