RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 ASB10Q8WXI3 467 aa8.31□□□□□ -1.08
CLIP1-214ENST00000540539 PTX4Q96A99 478 aa8.31□□□□□ -1.08
CLIP1-214ENST00000540539 SLC41A2Q96JW4 573 aa8.31□□□□□ -1.08
CLIP1-214ENST00000540539 PRAP1Q96NZ9 151 aa8.31□□□□□ -1.08
CLIP1-214ENST00000540539 MAP1LC3BQ9GZQ8 125 aa8.31□□□□□ -1.08
CLIP1-214ENST00000540539 PILRBQ9UKJ0 227 aa8.31□□□□□ -1.08
CLIP1-214ENST00000540539 ZFP37Q9Y6Q3 630 aaPredicted RBP8.31□□□□□ -1.08
CLIP1-214ENST00000540539 H3BSH0 61 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 SOX1O00570 391 aaPredicted RBP8.3□□□□□ -1.08
CLIP1-214ENST00000540539 MSTNO14793 375 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 DBHP09172 617 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 TSPOP30536 169 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 GCH1P30793 250 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 RAB11AP62491 216 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 PLXDC2Q6UX71 529 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 GDF7Q7Z4P5 450 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 MRGPRGQ86SM5 289 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 UBALD2Q8IYN6 164 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 CLDND2Q8NHS1 167 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 CMTM2Q8TAZ6 248 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 CCDC74AQ96AQ1 378 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 KTI12Q96EK9 354 aaPredicted RBP8.3□□□□□ -1.08
CLIP1-214ENST00000540539 HSPB9Q9BQS6 159 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 SLC35D1Q9NTN3 355 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 SIDT1Q9NXL6 827 aaKnown RBP8.3□□□□□ -1.08
CLIP1-214ENST00000540539 ABI3Q9P2A4 366 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 CGGBP1Q9UFW8 167 aaPredicted RBP8.3□□□□□ -1.08
CLIP1-214ENST00000540539 ANAPC1Q9H1A4 1944 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 TMEM265A0A087WTH1 108 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 A0A1W2PQH9 124 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 PRR32B1ATL7 298 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 ANKRD66B4E2M5 251 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 CCL16O15467 120 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 TNFSF15O95150 251 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 SEMA4FO95754 770 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 PI3P19957 117 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 ZNF10P21506 573 aaPredicted RBP8.3□□□□□ -1.08
CLIP1-214ENST00000540539 OTX1P32242 354 aaPredicted RBP8.3□□□□□ -1.08
CLIP1-214ENST00000540539 MANFP55145 182 aaKnown RBP8.3□□□□□ -1.08
CLIP1-214ENST00000540539 TMEM41BQ5BJD5 291 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 C16orf82Q7Z2V1 217 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 HOGA1Q86XE5 327 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 OR8G5Q8NG78 346 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 C5orf66Q9H5L9 145 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 IGFLR1Q9H665 355 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 SDF2L1Q9HCN8 221 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 PGPEP1Q9NXJ5 209 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 ZNF586Q9NXT0 402 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 ICAM5Q9UMF0 924 aa8.3□□□□□ -1.08
CLIP1-214ENST00000540539 MRPS16Q9Y3D3 137 aaKnown RBP8.3□□□□□ -1.08
CLIP1-214ENST00000540539 SPTBP11277 2137 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 TRBV5-5A0A0J9YX44 114 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 CDIPTO14735 213 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 GPR137BO60478 399 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 TIAF1O95411 115 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 KLK1P06870 262 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 GABRA3P34903 492 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 EMP2P54851 167 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 RPL23AP62750 156 aaKnown RBP8.29□□□□□ -1.08
CLIP1-214ENST00000540539 PMPCAQ10713 525 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 SP5Q6BEB4 398 aaPredicted RBP8.29□□□□□ -1.08
CLIP1-214ENST00000540539 PTCRAQ6ISU1 281 aaPredicted RBP8.29□□□□□ -1.08
CLIP1-214ENST00000540539 TMEM184AQ6ZMB5 413 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 FAM220AQ7Z4H9 259 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 SGPP2Q8IWX5 399 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 C1orf174Q8IYL3 243 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 OR1K1Q8NGR3 316 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 OR10AC1Q8NH08 325 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 POM121L2Q96KW2 1035 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 ARHGDIGQ99819 225 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 ABHD6Q9BV23 337 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 PDFQ9HBH1 243 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 C19orf53Q9UNZ5 99 aaPredicted RBP8.29□□□□□ -1.08
CLIP1-214ENST00000540539 OR51B4Q9Y5P0 310 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 OBSL1O75147 1896 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 IGLC7A0M8Q6 106 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 ZNF217O75362 1048 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 TOX4O94842 621 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 CRYGCP07315 174 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 CFPP27918 469 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 GRK6P43250 576 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 GFRA1P56159 465 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 SUMO1P63165 101 aaKnown RBP8.29□□□□□ -1.08
CLIP1-214ENST00000540539 SHBQ15464 509 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 BSXQ3C1V8 233 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 AMMECR1LQ6DCA0 310 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 FAM71F2Q6NXP2 309 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 ATG4DQ86TL0 474 aaPredicted RBP8.29□□□□□ -1.08
CLIP1-214ENST00000540539 ZNF761Q86XN6 746 aaPredicted RBP8.29□□□□□ -1.08
CLIP1-214ENST00000540539 CALHM1Q8IU99 346 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 ZFP62Q8NB50 900 aaPredicted RBP8.29□□□□□ -1.08
CLIP1-214ENST00000540539 VN1R2Q8NFZ6 395 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 CADM4Q8NFZ8 388 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 OR52R1Q8NGF1 315 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 OR10G4Q8NGN3 311 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 ASB11Q8WXH4 323 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 OR5P2Q8WZ92 322 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 FGGYQ96C11 551 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 SFRP2Q96HF1 295 aa8.29□□□□□ -1.08
CLIP1-214ENST00000540539 C20orf141Q9NUB4 165 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms